| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230065
Identifier: 17230065
GI number: 17230065
Start: 3075025
End: 3075594
Strand: Reverse
Name: 17230065
Synonym: all2573
Alternate gene names: NA
Gene position: 3075594-3075025 (Counterclockwise)
Preceding gene: 17230070
Following gene: 17230063
Centisome position: 47.95
GC content: 41.4
Gene sequence:
>570_bases ATGATAAAAAATGACTGGAGGCAGGAAAAGAAAAATATTAAATTAGCTGTAATAGCAGTGATACCAACACTGTTGTGTTT GATGTTTTCCCACACTGTTAATGCTGAAGATCCAGGCGAATGTTTTATGATTACTACCTCTGGTAGAACCATTCCCTTGA GAAAGCTGTGTGGTGGTACAAAGACAGTTCAAAACAACGCAGAGAGAGTTTTTCGGGTTCCTATCAAACGGCGATTGGGT AGAACGCCTGTGATTGATGTGACCTTCAATGATAAGAAAACCTTTGAAATGATTGTCGACACAGGTGCGAACAATACCTT AATACCTCTAAAGTTAGCGATCGCTCTCCAACTCCAGCCTACAGGGGTGATGAAGGCTCAAATTGCTGATGGTACACAAG TGGAATTTTCTACTAGTAAGGTGAAATCGATCGCAGCTGGTGGAGCCATAGCTAAAAACATCCAAGTGGCGATCGCACCA AAAGCAGAATTTGGTCTACTAGGGCATGATTTTTTTGGCAACTACGACATCAAGATTTTAGAAACAGAGGTAGAGTTTCA TCCTCGGTAA
Upstream 100 bases:
>100_bases CTATAAGAACTAATGATTTAATTCTTTTCTAGATAGTTTCATATATCTAGGTAAACAGATTTTCTATAAATATTCCAGAA ACATAATTGAGAACAAAATA
Downstream 100 bases:
>100_bases TTGTTAGAGACGCGATTAATCGCTCGGTAATTGTTAGAGAGACGCGATTAATCGCGTCTGTACAATTAATTGTGAAAAAT AGCGCGGTAAGCTTACCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MIKNDWRQEKKNIKLAVIAVIPTLLCLMFSHTVNAEDPGECFMITTSGRTIPLRKLCGGTKTVQNNAERVFRVPIKRRLG RTPVIDVTFNDKKTFEMIVDTGANNTLIPLKLAIALQLQPTGVMKAQIADGTQVEFSTSKVKSIAAGGAIAKNIQVAIAP KAEFGLLGHDFFGNYDIKILETEVEFHPR
Sequences:
>Translated_189_residues MIKNDWRQEKKNIKLAVIAVIPTLLCLMFSHTVNAEDPGECFMITTSGRTIPLRKLCGGTKTVQNNAERVFRVPIKRRLG RTPVIDVTFNDKKTFEMIVDTGANNTLIPLKLAIALQLQPTGVMKAQIADGTQVEFSTSKVKSIAAGGAIAKNIQVAIAP KAEFGLLGHDFFGNYDIKILETEVEFHPR >Mature_189_residues MIKNDWRQEKKNIKLAVIAVIPTLLCLMFSHTVNAEDPGECFMITTSGRTIPLRKLCGGTKTVQNNAERVFRVPIKRRLG RTPVIDVTFNDKKTFEMIVDTGANNTLIPLKLAIALQLQPTGVMKAQIADGTQVEFSTSKVKSIAAGGAIAKNIQVAIAP KAEFGLLGHDFFGNYDIKILETEVEFHPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20851; Mature: 20851
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNDWRQEKKNIKLAVIAVIPTLLCLMFSHTVNAEDPGECFMITTSGRTIPLRKLCGGT CCCCCHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEHHHHCCCC KTVQNNAERVFRVPIKRRLGRTPVIDVTFNDKKTFEMIVDTGANNTLIPLKLAIALQLQP CHHHCCCCEEEECCHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEEEECC TGVMKAQIADGTQVEFSTSKVKSIAAGGAIAKNIQVAIAPKAEFGLLGHDFFGNYDIKIL CCCEEEEECCCCEEEECHHHHHHHHCCCCEECCEEEEEECCCCCCEEECCCCCCCEEEEE ETEVEFHPR EEEEEECCC >Mature Secondary Structure MIKNDWRQEKKNIKLAVIAVIPTLLCLMFSHTVNAEDPGECFMITTSGRTIPLRKLCGGT CCCCCHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEHHHHCCCC KTVQNNAERVFRVPIKRRLGRTPVIDVTFNDKKTFEMIVDTGANNTLIPLKLAIALQLQP CHHHCCCCEEEECCHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEEEEEECC TGVMKAQIADGTQVEFSTSKVKSIAAGGAIAKNIQVAIAPKAEFGLLGHDFFGNYDIKIL CCCEEEEECCCCEEEECHHHHHHHHCCCCEECCEEEEEECCCCCCEEECCCCCCCEEEEE ETEVEFHPR EEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA