| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230041
Identifier: 17230041
GI number: 17230041
Start: 3051362
End: 3052363
Strand: Reverse
Name: 17230041
Synonym: all2549
Alternate gene names: NA
Gene position: 3052363-3051362 (Counterclockwise)
Preceding gene: 17230042
Following gene: 17230040
Centisome position: 47.59
GC content: 35.03
Gene sequence:
>1002_bases ATGCGAAAACTTTATTTCTTAGTCCCAGGAACTGATGGCAAATTTGCTTGCGGTGGTCTTTGGGCAGAGTTAAAATCATT TAAATTGGCGCAACAAATTTGTCATGCCGAAGTTGTGACTTACCGTCAAAGAGAAGTCGGGAAGTTATTTCTTGATGAAC TGTTGAAAGAGAAAAATTTAGACGACGTAATCTTTGTAATTAGCTGGGGTTTTGACATAGCTAAGTTAGCGGCAAAACTC AAGCCATACAATGTGGTTTATCATGCTCACAGTGCAGGTTATAAGTTCAGCCTACCTGCAAGTATTCCCATCATTACTGT GAGTCGTAACACTTTGGGATATTGGGGACAAAAAGCCCCTAATTCTCTCATTTATTATGTACCAAATGAAATTAGTCCTG AATTTAGAAATTTACATACAGAAAGAGACATAGATGTTTTAGTTCAGGCGCGAAAATCTTCTGAATATCTGATAAAACAA CTCATTCCAGCTTTAAAAGAAAAATGTAAAGTCGAGGTAGTTAATTCTTATGTTGAAGATTTACCTGGGCTATTTAATCG CACTAAAGTTTATCTTTATGATTCTGCTGAATACTGGGCGCAACAGAATGTTAGTGAAGGTTTTGGTTTACAACCAATGG AAGCCTTGGCTTGTGGGTGTCAGGTTTTTTCTAGTGTTAATGGTGGACTGTCAGATTATTTAGACCCTGGTTTTAATTGT CATAAAATTTCTGGTTATTCCCAAGAATATGATGTCCAGCGTATTCTCAAGGTGATAGATTCTTCCATATCGGCAAATTT ATCAGAAGATTTCTTTGTTGAATATCGTGTTGAAAATATTTTGAAGCGTTTGCAAGTAATTCTAAAGGAAATAAACGAAT TTTTTGACCACAGACAATATCAAGAAAGTAATATACCTAGTTTAACTAAAGTGAGGTTGGTGAGGCTTTTTCTCAATAGA ATATATAATAAATTTCAAAAGAAATATTTTCAAGGCTTGTAG
Upstream 100 bases:
>100_bases TATTAAGGTGGCATGGCGAGAGAGTCATTAGTCAAGTCGCTGCGCTCCAATTCAAAAAAAGTCGATAGTCAATAGTCATT CTCCTTGCTCCTATTCCTTC
Downstream 100 bases:
>100_bases AAAATTTTAGTAAGATATTAAATTATATAGGACTCATACCTAATTTTTGAAATAGATTTAGACGCGCATTAGCTTAGTTA AATCTGATTCCTAAAGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MRKLYFLVPGTDGKFACGGLWAELKSFKLAQQICHAEVVTYRQREVGKLFLDELLKEKNLDDVIFVISWGFDIAKLAAKL KPYNVVYHAHSAGYKFSLPASIPIITVSRNTLGYWGQKAPNSLIYYVPNEISPEFRNLHTERDIDVLVQARKSSEYLIKQ LIPALKEKCKVEVVNSYVEDLPGLFNRTKVYLYDSAEYWAQQNVSEGFGLQPMEALACGCQVFSSVNGGLSDYLDPGFNC HKISGYSQEYDVQRILKVIDSSISANLSEDFFVEYRVENILKRLQVILKEINEFFDHRQYQESNIPSLTKVRLVRLFLNR IYNKFQKKYFQGL
Sequences:
>Translated_333_residues MRKLYFLVPGTDGKFACGGLWAELKSFKLAQQICHAEVVTYRQREVGKLFLDELLKEKNLDDVIFVISWGFDIAKLAAKL KPYNVVYHAHSAGYKFSLPASIPIITVSRNTLGYWGQKAPNSLIYYVPNEISPEFRNLHTERDIDVLVQARKSSEYLIKQ LIPALKEKCKVEVVNSYVEDLPGLFNRTKVYLYDSAEYWAQQNVSEGFGLQPMEALACGCQVFSSVNGGLSDYLDPGFNC HKISGYSQEYDVQRILKVIDSSISANLSEDFFVEYRVENILKRLQVILKEINEFFDHRQYQESNIPSLTKVRLVRLFLNR IYNKFQKKYFQGL >Mature_333_residues MRKLYFLVPGTDGKFACGGLWAELKSFKLAQQICHAEVVTYRQREVGKLFLDELLKEKNLDDVIFVISWGFDIAKLAAKL KPYNVVYHAHSAGYKFSLPASIPIITVSRNTLGYWGQKAPNSLIYYVPNEISPEFRNLHTERDIDVLVQARKSSEYLIKQ LIPALKEKCKVEVVNSYVEDLPGLFNRTKVYLYDSAEYWAQQNVSEGFGLQPMEALACGCQVFSSVNGGLSDYLDPGFNC HKISGYSQEYDVQRILKVIDSSISANLSEDFFVEYRVENILKRLQVILKEINEFFDHRQYQESNIPSLTKVRLVRLFLNR IYNKFQKKYFQGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38397; Mature: 38397
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLYFLVPGTDGKFACGGLWAELKSFKLAQQICHAEVVTYRQREVGKLFLDELLKEKNL CCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDVIFVISWGFDIAKLAAKLKPYNVVYHAHSAGYKFSLPASIPIITVSRNTLGYWGQKAP CCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCC NSLIYYVPNEISPEFRNLHTERDIDVLVQARKSSEYLIKQLIPALKEKCKVEVVNSYVED CCEEEECCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGLFNRTKVYLYDSAEYWAQQNVSEGFGLQPMEALACGCQVFSSVNGGLSDYLDPGFNC CCHHHCCCEEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCE HKISGYSQEYDVQRILKVIDSSISANLSEDFFVEYRVENILKRLQVILKEINEFFDHRQY EECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QESNIPSLTKVRLVRLFLNRIYNKFQKKYFQGL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKLYFLVPGTDGKFACGGLWAELKSFKLAQQICHAEVVTYRQREVGKLFLDELLKEKNL CCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DDVIFVISWGFDIAKLAAKLKPYNVVYHAHSAGYKFSLPASIPIITVSRNTLGYWGQKAP CCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCC NSLIYYVPNEISPEFRNLHTERDIDVLVQARKSSEYLIKQLIPALKEKCKVEVVNSYVED CCEEEECCCCCCHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGLFNRTKVYLYDSAEYWAQQNVSEGFGLQPMEALACGCQVFSSVNGGLSDYLDPGFNC CCHHHCCCEEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCE HKISGYSQEYDVQRILKVIDSSISANLSEDFFVEYRVENILKRLQVILKEINEFFDHRQY EECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QESNIPSLTKVRLVRLFLNRIYNKFQKKYFQGL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA