Click here to switch to the map view.

The map label for this gene is 17230039

Identifier: 17230039

GI number: 17230039

Start: 3050410

End: 3050760

Strand: Reverse

Name: 17230039

Synonym: all2547

Alternate gene names: NA

Gene position: 3050760-3050410 (Counterclockwise)

Preceding gene: 17230040

Following gene: 17230038

Centisome position: 47.57

GC content: 46.72

Gene sequence:

>351_bases
ATGTCTAATAACCGTTCTGGAACATTTATTGGCGGTATGATGCTGGGAGCTACCATTGGTGCTTTAGCAGGGCTGCTTGC
TGCTCCACGCACAGGGCGCGAAACTCGTAAACTTTTGAAAAAGTCTGCTGATGCCATCCCCGAATTAGCAGAAGATTTAT
CAACAAGTGTACAAATTCAAGCAGATCGGCTGTCTACCAACGCTTTGCGAAATTGGGATGAAACTTTAGATAGATTACGG
GATGCGATCGCAGCTGGTATGGATGCTAGTCAGCGCGAAAGCCAAGTCTTGAAACGCCAACAAGCTACCCCAGACGCTGA
TTCTCTTGCCCAAGAATTAGAAACCCCATAA

Upstream 100 bases:

>100_bases
GTTGATATATTGTCACGCTAAATTAATCAGATAAAATTACTGGTGTTTTTCAAAAGGCGAAAACCACCTAAAATAAGTGT
AAGGAGAGAAACAATATAAG

Downstream 100 bases:

>100_bases
TTATGAGACAGAAATACATACAGTAAACCTTGTTTTCCTGTGTAGGTACAAGCCTAGTCGTAGATTATTTGAATTTTTAT
TGCCGTGGTTGAACCCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSNNRSGTFIGGMMLGATIGALAGLLAAPRTGRETRKLLKKSADAIPELAEDLSTSVQIQADRLSTNALRNWDETLDRLR
DAIAAGMDASQRESQVLKRQQATPDADSLAQELETP

Sequences:

>Translated_116_residues
MSNNRSGTFIGGMMLGATIGALAGLLAAPRTGRETRKLLKKSADAIPELAEDLSTSVQIQADRLSTNALRNWDETLDRLR
DAIAAGMDASQRESQVLKRQQATPDADSLAQELETP
>Mature_115_residues
SNNRSGTFIGGMMLGATIGALAGLLAAPRTGRETRKLLKKSADAIPELAEDLSTSVQIQADRLSTNALRNWDETLDRLRD
AIAAGMDASQRESQVLKRQQATPDADSLAQELETP

Specific function: Unknown

COG id: COG4980

COG function: function code R; Gas vesicle protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12452; Mature: 12321

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNRSGTFIGGMMLGATIGALAGLLAAPRTGRETRKLLKKSADAIPELAEDLSTSVQIQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRLSTNALRNWDETLDRLRDAIAAGMDASQRESQVLKRQQATPDADSLAQELETP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SNNRSGTFIGGMMLGATIGALAGLLAAPRTGRETRKLLKKSADAIPELAEDLSTSVQIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADRLSTNALRNWDETLDRLRDAIAAGMDASQRESQVLKRQQATPDADSLAQELETP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA