| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230037
Identifier: 17230037
GI number: 17230037
Start: 3048738
End: 3049547
Strand: Reverse
Name: 17230037
Synonym: all2545
Alternate gene names: NA
Gene position: 3049547-3048738 (Counterclockwise)
Preceding gene: 17230038
Following gene: 17230036
Centisome position: 47.55
GC content: 43.83
Gene sequence:
>810_bases ATGCAGTCTCGTTTTTGGCGACGAATTTTAGTATCTATTACAGTATTTTTCTTGGCTGGGTCACTTTGGGTAATGAATTC CCCCTCTGCGCTGGCTTACGACAATCCTGAGTTGTTACCTAAGTTTTTCACACCAGTTGTAGACCTAGCTAAATCACTCC CTGACCCGCAAGAAGAAAAGCTAGTCGAAGACATAGAGCAATTTGAGGCTGATACTGGTTGGAAACTACGTGTACTGACT CAGTATGACCGCACTCCGGGTAGGGCTGTAATTAATTATTGGGGTTTGGATGATAAAAGCATTCTCCTAGTTGCTGACTC CCGTGGCGGGAACATCCTCAGTTTTAGCGTTGGTGATGCAGTTTATGAACTGTTACCCCGGACTTTTTGGATAGAACTAC AAACCCGCTTTGGGAATTTGTATTTTGTCCGAGAACAAGGTGAAGACCAAGCGATTTTACAAGCTTTAGATTCAGTTAAA GGCTGTTTACTTAAAGGTGGTTGTAACGTTGTACCTGGACTACCCAGGGAACAGTGGATTTTAACCTTAATTACATCCAT TATTGGTGGAATTATTTGTGGCTTTGCTGGACAACCCCGCAAGGAAGGACAAATTTTTGCTTGGCAATGGGCTTTAATTT TCTCACCATTGTGGGGAATTTTGTTCATAGCCTTTGGTATCGGGCCTGTGGTAACGCGCACAAGTGACTGGCTACCTCTA GTCCGCAACTTCTCCGGTTTCTTCATTGGGGGTTTAGTGGCTTACTTATCCCCTGTTTTTAGTCGTCCTTCGTCTAATGC TAATTCGTAG
Upstream 100 bases:
>100_bases ATTAGAGTAAAGTAAACAAGTGTAACAAACTATCACTTTTCTCATACTCTTTTGAAGTAACTTGTTCACTTTTACTGTTG ATATTTGTATAAGAACGTCC
Downstream 100 bases:
>100_bases ATGGGATTGGGGATTGGGGATTGGGGATTGGTGAAAAATATATTACTAGCCTCTAAGCTCTAATCTCTAATCTCTAATCT ATCTCCTCTTACTTAGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MQSRFWRRILVSITVFFLAGSLWVMNSPSALAYDNPELLPKFFTPVVDLAKSLPDPQEEKLVEDIEQFEADTGWKLRVLT QYDRTPGRAVINYWGLDDKSILLVADSRGGNILSFSVGDAVYELLPRTFWIELQTRFGNLYFVREQGEDQAILQALDSVK GCLLKGGCNVVPGLPREQWILTLITSIIGGIICGFAGQPRKEGQIFAWQWALIFSPLWGILFIAFGIGPVVTRTSDWLPL VRNFSGFFIGGLVAYLSPVFSRPSSNANS
Sequences:
>Translated_269_residues MQSRFWRRILVSITVFFLAGSLWVMNSPSALAYDNPELLPKFFTPVVDLAKSLPDPQEEKLVEDIEQFEADTGWKLRVLT QYDRTPGRAVINYWGLDDKSILLVADSRGGNILSFSVGDAVYELLPRTFWIELQTRFGNLYFVREQGEDQAILQALDSVK GCLLKGGCNVVPGLPREQWILTLITSIIGGIICGFAGQPRKEGQIFAWQWALIFSPLWGILFIAFGIGPVVTRTSDWLPL VRNFSGFFIGGLVAYLSPVFSRPSSNANS >Mature_269_residues MQSRFWRRILVSITVFFLAGSLWVMNSPSALAYDNPELLPKFFTPVVDLAKSLPDPQEEKLVEDIEQFEADTGWKLRVLT QYDRTPGRAVINYWGLDDKSILLVADSRGGNILSFSVGDAVYELLPRTFWIELQTRFGNLYFVREQGEDQAILQALDSVK GCLLKGGCNVVPGLPREQWILTLITSIIGGIICGFAGQPRKEGQIFAWQWALIFSPLWGILFIAFGIGPVVTRTSDWLPL VRNFSGFFIGGLVAYLSPVFSRPSSNANS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30100; Mature: 30100
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSRFWRRILVSITVFFLAGSLWVMNSPSALAYDNPELLPKFFTPVVDLAKSLPDPQEEK CCHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHH LVEDIEQFEADTGWKLRVLTQYDRTPGRAVINYWGLDDKSILLVADSRGGNILSFSVGDA HHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEHHHH VYELLPRTFWIELQTRFGNLYFVREQGEDQAILQALDSVKGCLLKGGCNVVPGLPREQWI HHHHCCHHEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHH LTLITSIIGGIICGFAGQPRKEGQIFAWQWALIFSPLWGILFIAFGIGPVVTRTSDWLPL HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH VRNFSGFFIGGLVAYLSPVFSRPSSNANS HHCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQSRFWRRILVSITVFFLAGSLWVMNSPSALAYDNPELLPKFFTPVVDLAKSLPDPQEEK CCHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHH LVEDIEQFEADTGWKLRVLTQYDRTPGRAVINYWGLDDKSILLVADSRGGNILSFSVGDA HHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEHHHH VYELLPRTFWIELQTRFGNLYFVREQGEDQAILQALDSVKGCLLKGGCNVVPGLPREQWI HHHHCCHHEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCCCCCCCHHHHH LTLITSIIGGIICGFAGQPRKEGQIFAWQWALIFSPLWGILFIAFGIGPVVTRTSDWLPL HHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH VRNFSGFFIGGLVAYLSPVFSRPSSNANS HHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA