| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230021
Identifier: 17230021
GI number: 17230021
Start: 3033652
End: 3035013
Strand: Reverse
Name: 17230021
Synonym: all2529
Alternate gene names: NA
Gene position: 3035013-3033652 (Counterclockwise)
Preceding gene: 17230022
Following gene: 17230020
Centisome position: 47.32
GC content: 38.4
Gene sequence:
>1362_bases ATGCCACTTGAAACAGTAATCGGAACTTCCCTGAACTACTATCTGATTGCTTTTGATGCTGATGGCAAGGAATGTGATGG AACTCAACAAGTCAGCCAAAAGGTCATAGACATCTTATCTACACAGCCAATCACAGATGTCTTCTTAATTAGTCATGGCT GGATGGGTGATATTTCCTCCGCCCAAAAGCACTACAAAGAATGGATTAGAACAATGGCTGACAGCCATACTGATATTGAA AAAATCCAACAAATACGACCAGAGTTTCATCCTCTGTGGATAGGTTTACACTGGCCTAGTAGTCCTTGGAGTCATGAAGG CTTAAAAGCTGTTGTTTCTTATGACATCACAGATAATTCTCAACAGCAAATGATTGATGATTATGCTCAAAGCATAGCTG ATACGGAAGTTACTAGAGAAGCACTGCGAGTGATTTTTACAGCAGCAATAGAGTATAAGTCTGCGCCGGATACTTTACCA TTAGAAGTAAGTCAAGCTTATGAGGTATTGCTAAAAGAGGCCTCTTTGATTAGTGATGAAGAAGATGCTGACGGCTGGAG TCAAACTGAATTATTAAATTTAGATCCGGAAACTGTCTATCAAAATATTTTGTTAGAAGATACTCAAGATTTCAGCTTTG GTTTTACTGATACTGTTAAATCAGCATGGGATTCATTTTTAGGGCTGCCAAGATTAGTCTCTTTCTGGAAAATGAAAGAC CGCGCCCGTAGAATTGGTGAAACTAGTGGTTTTAATTTTTTAAAAAAACTGCAACAGACAGCTGCAAAAACAGTACGGTT TCATCTTATGGGACATAGTTTTGGTTGTATATTTGCTTCGGCTACAGTCGCGGGGAATAAACAAAATAACGCTTTAGTTC GTCCTGTAAATTCTCTGGTTCTAGTACAAGGTGCATTATCACTCTGGTCTTTTAGTGCGAAGATTCCTTATAAGAATAAT TTGGTTGGTTACTTTCACTCAATCATTGCTCAGAGGAAAGTTGCCGGTGCAATTATTACTACCCAATCTAAACACGATAG TGCTGTCAAGCTAGCCTATCCTGTAGCGGGGAAATTAGGATTATTTGCAGGTCAAAATATAGATACTGATGTTAGTTCAC CTCCGCTTCCTAATGTTGGGGGAATTGGCAATTATGGTATTCAGGGAACAGACTTAGATATTATCAATATTGATATGCTT CCCCTACAATATTCTTACAATTTCCAACCACAGAAAATTTACAACTTAGAAAGTAGTCAATACATTTACGATCCTCAGGC AAATTTTGTTATGGGTTCCCACTGTGTTATTGACAAACCTGAAATAGCTCATGCGGTATGGTCAGCAGTTCTAAGTAGTT AA
Upstream 100 bases:
>100_bases CGTATTAATTGATTCACGCATATTTTCTACTATAAGCTCTAACAATCACTTGAAACTCCAGTTTCAGTAAATTTACATTG CACACTGTTAAATAACATAT
Downstream 100 bases:
>100_bases TTTGACTAAACATCAAATCTTTCATTACATCTTCGGGTTTATTTATACTTATATCTTGCACCACTCTCTTATTACCAAAA TTACAGGCTAAAAGGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MPLETVIGTSLNYYLIAFDADGKECDGTQQVSQKVIDILSTQPITDVFLISHGWMGDISSAQKHYKEWIRTMADSHTDIE KIQQIRPEFHPLWIGLHWPSSPWSHEGLKAVVSYDITDNSQQQMIDDYAQSIADTEVTREALRVIFTAAIEYKSAPDTLP LEVSQAYEVLLKEASLISDEEDADGWSQTELLNLDPETVYQNILLEDTQDFSFGFTDTVKSAWDSFLGLPRLVSFWKMKD RARRIGETSGFNFLKKLQQTAAKTVRFHLMGHSFGCIFASATVAGNKQNNALVRPVNSLVLVQGALSLWSFSAKIPYKNN LVGYFHSIIAQRKVAGAIITTQSKHDSAVKLAYPVAGKLGLFAGQNIDTDVSSPPLPNVGGIGNYGIQGTDLDIINIDML PLQYSYNFQPQKIYNLESSQYIYDPQANFVMGSHCVIDKPEIAHAVWSAVLSS
Sequences:
>Translated_453_residues MPLETVIGTSLNYYLIAFDADGKECDGTQQVSQKVIDILSTQPITDVFLISHGWMGDISSAQKHYKEWIRTMADSHTDIE KIQQIRPEFHPLWIGLHWPSSPWSHEGLKAVVSYDITDNSQQQMIDDYAQSIADTEVTREALRVIFTAAIEYKSAPDTLP LEVSQAYEVLLKEASLISDEEDADGWSQTELLNLDPETVYQNILLEDTQDFSFGFTDTVKSAWDSFLGLPRLVSFWKMKD RARRIGETSGFNFLKKLQQTAAKTVRFHLMGHSFGCIFASATVAGNKQNNALVRPVNSLVLVQGALSLWSFSAKIPYKNN LVGYFHSIIAQRKVAGAIITTQSKHDSAVKLAYPVAGKLGLFAGQNIDTDVSSPPLPNVGGIGNYGIQGTDLDIINIDML PLQYSYNFQPQKIYNLESSQYIYDPQANFVMGSHCVIDKPEIAHAVWSAVLSS >Mature_452_residues PLETVIGTSLNYYLIAFDADGKECDGTQQVSQKVIDILSTQPITDVFLISHGWMGDISSAQKHYKEWIRTMADSHTDIEK IQQIRPEFHPLWIGLHWPSSPWSHEGLKAVVSYDITDNSQQQMIDDYAQSIADTEVTREALRVIFTAAIEYKSAPDTLPL EVSQAYEVLLKEASLISDEEDADGWSQTELLNLDPETVYQNILLEDTQDFSFGFTDTVKSAWDSFLGLPRLVSFWKMKDR ARRIGETSGFNFLKKLQQTAAKTVRFHLMGHSFGCIFASATVAGNKQNNALVRPVNSLVLVQGALSLWSFSAKIPYKNNL VGYFHSIIAQRKVAGAIITTQSKHDSAVKLAYPVAGKLGLFAGQNIDTDVSSPPLPNVGGIGNYGIQGTDLDIINIDMLP LQYSYNFQPQKIYNLESSQYIYDPQANFVMGSHCVIDKPEIAHAVWSAVLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50456; Mature: 50325
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLETVIGTSLNYYLIAFDADGKECDGTQQVSQKVIDILSTQPITDVFLISHGWMGDISS CCCHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH AQKHYKEWIRTMADSHTDIEKIQQIRPEFHPLWIGLHWPSSPWSHEGLKAVVSYDITDNS HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCH QQQMIDDYAQSIADTEVTREALRVIFTAAIEYKSAPDTLPLEVSQAYEVLLKEASLISDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC EDADGWSQTELLNLDPETVYQNILLEDTQDFSFGFTDTVKSAWDSFLGLPRLVSFWKMKD CCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH RARRIGETSGFNFLKKLQQTAAKTVRFHLMGHSFGCIFASATVAGNKQNNALVRPVNSLV HHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHEEEEEECCCCCCCCEECHHHHHH LVQGALSLWSFSAKIPYKNNLVGYFHSIIAQRKVAGAIITTQSKHDSAVKLAYPVAGKLG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEEECCCCCHH LFAGQNIDTDVSSPPLPNVGGIGNYGIQGTDLDIINIDMLPLQYSYNFQPQKIYNLESSQ EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCCC YIYDPQANFVMGSHCVIDKPEIAHAVWSAVLSS EEECCCCCEEECCCEECCCHHHHHHHHHHHHCC >Mature Secondary Structure PLETVIGTSLNYYLIAFDADGKECDGTQQVSQKVIDILSTQPITDVFLISHGWMGDISS CCHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH AQKHYKEWIRTMADSHTDIEKIQQIRPEFHPLWIGLHWPSSPWSHEGLKAVVSYDITDNS HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCH QQQMIDDYAQSIADTEVTREALRVIFTAAIEYKSAPDTLPLEVSQAYEVLLKEASLISDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC EDADGWSQTELLNLDPETVYQNILLEDTQDFSFGFTDTVKSAWDSFLGLPRLVSFWKMKD CCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH RARRIGETSGFNFLKKLQQTAAKTVRFHLMGHSFGCIFASATVAGNKQNNALVRPVNSLV HHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCHHEEEEEECCCCCCCCEECHHHHHH LVQGALSLWSFSAKIPYKNNLVGYFHSIIAQRKVAGAIITTQSKHDSAVKLAYPVAGKLG HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEEECCCCCHH LFAGQNIDTDVSSPPLPNVGGIGNYGIQGTDLDIINIDMLPLQYSYNFQPQKIYNLESSQ EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCCC YIYDPQANFVMGSHCVIDKPEIAHAVWSAVLSS EEECCCCCEEECCCEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA