| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229998
Identifier: 17229998
GI number: 17229998
Start: 3007100
End: 3008071
Strand: Reverse
Name: 17229998
Synonym: all2506
Alternate gene names: NA
Gene position: 3008071-3007100 (Counterclockwise)
Preceding gene: 17229999
Following gene: 17229993
Centisome position: 46.9
GC content: 47.43
Gene sequence:
>972_bases ATGACAAGGGCATTCCCAAATATAGCAAAGTGCTGGAAGAATTTTATATCCCGTCTTACAGCATACCTGAAACTCTTGTT TCAGGGCAACACTGTCGAGGTTCTTCCTGCCCTAGCTGGCCCTGTCCTTAACTTAGGTGGGGGCGGCCCGGATGTGGAAG CGGCTATTCAGTGGATGATTCACCAAGTCAGGGGAACCGCTAAGGTTAACGTTGTTGTTCTCCGCGCTTACGGCGGGAAT GACTACAATCACCTGATTTATCGAATGTCCGGTGTAAACTCCGTGCAGACGCTGGTTATCAGCAATCGCCAAGATGCTAA CAGAGATGATATTGTCCAGAAAGTCCTCAATGCTGGTGTAGTTTTCTTTGCAGGCGGTGACCAATGCCAATATATTCGTA GCTGGAAAAACACCAAGTTAGAGAAAGCTGTAGCATCAGTTTACCGCAGAGGCGGAGCCGTTGGCGGCACTAGTGCCGGA GCGATGATTATGAGTGATTTCATCTACGACGCTTGTGCTTGTGAAGACCCCATCGAAACCAAAGACGCACTTGAAGACCC TTACCAGAATATTACCTTTACCTACAACTTCTTCCAATGGTCACATTTGCGAGGAACCATTATCGACACCCACTTTGATA GTCGTAAGCGCATGGGACGGATAATGGCTTTTATTGCCCGACAAATTCAAGATGGTGTGTCTAGAAGTGCCTTAGGGATA GCCATTAGTGAGGAGACATCAGTTGTTGTAGATAAATATGGTAAGGCAAAAGTCTTGGGGAGAAATGCCGCCTATTTCGT CTTAGGCGACCATCCCCCAGAAATATGCAAACCCCGAACACCACTGACATATTCCGACTACAAAATTTGGCGCGTCCCCT GTGGCGAAACTTTTGACTTGAATAACCCACCAGCCAGGGGTTATTACTTCAGGAGTGTGAAACGGGGGAGGTTCGATTCA GACCCTTATTAA
Upstream 100 bases:
>100_bases TATCCAGCGCTAACAAACAGTACAAGCCCTGTACGCTGGGAATTTTAGCCTTTGGAGTGCGAAATTAAGCAATAGTTGCA GTTTGCTCCAAAAGGTTCGT
Downstream 100 bases:
>100_bases TTGACGGTTGACGGTTGGGAATAAATTGTTGTCTATACCAAAGTTGCTTGTTTGCGTAAACTTTGAATAGTAGCGATCGC GTGTTTCGCTACTATATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Cyanophycinase-Like Protein; Cyanophycinase And Related Exopeptidase-Like Protein; Cyanophycinase Domain-Containing Protein; Cyanophycinase Or Related Exopeptidase; Cyanophycinase And Related Exopeptidase-Like; Cyanophycinase-Like Exopeptidase; Peptidase S
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTRAFPNIAKCWKNFISRLTAYLKLLFQGNTVEVLPALAGPVLNLGGGGPDVEAAIQWMIHQVRGTAKVNVVVLRAYGGN DYNHLIYRMSGVNSVQTLVISNRQDANRDDIVQKVLNAGVVFFAGGDQCQYIRSWKNTKLEKAVASVYRRGGAVGGTSAG AMIMSDFIYDACACEDPIETKDALEDPYQNITFTYNFFQWSHLRGTIIDTHFDSRKRMGRIMAFIARQIQDGVSRSALGI AISEETSVVVDKYGKAKVLGRNAAYFVLGDHPPEICKPRTPLTYSDYKIWRVPCGETFDLNNPPARGYYFRSVKRGRFDS DPY
Sequences:
>Translated_323_residues MTRAFPNIAKCWKNFISRLTAYLKLLFQGNTVEVLPALAGPVLNLGGGGPDVEAAIQWMIHQVRGTAKVNVVVLRAYGGN DYNHLIYRMSGVNSVQTLVISNRQDANRDDIVQKVLNAGVVFFAGGDQCQYIRSWKNTKLEKAVASVYRRGGAVGGTSAG AMIMSDFIYDACACEDPIETKDALEDPYQNITFTYNFFQWSHLRGTIIDTHFDSRKRMGRIMAFIARQIQDGVSRSALGI AISEETSVVVDKYGKAKVLGRNAAYFVLGDHPPEICKPRTPLTYSDYKIWRVPCGETFDLNNPPARGYYFRSVKRGRFDS DPY >Mature_322_residues TRAFPNIAKCWKNFISRLTAYLKLLFQGNTVEVLPALAGPVLNLGGGGPDVEAAIQWMIHQVRGTAKVNVVVLRAYGGND YNHLIYRMSGVNSVQTLVISNRQDANRDDIVQKVLNAGVVFFAGGDQCQYIRSWKNTKLEKAVASVYRRGGAVGGTSAGA MIMSDFIYDACACEDPIETKDALEDPYQNITFTYNFFQWSHLRGTIIDTHFDSRKRMGRIMAFIARQIQDGVSRSALGIA ISEETSVVVDKYGKAKVLGRNAAYFVLGDHPPEICKPRTPLTYSDYKIWRVPCGETFDLNNPPARGYYFRSVKRGRFDSD PY
Specific function: Unknown
COG id: COG4242
COG function: function code QP; Cyanophycinase and related exopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36066; Mature: 35934
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAFPNIAKCWKNFISRLTAYLKLLFQGNTVEVLPALAGPVLNLGGGGPDVEAAIQWMI CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEECCCCCCCHHHHHHHHH HQVRGTAKVNVVVLRAYGGNDYNHLIYRMSGVNSVQTLVISNRQDANRDDIVQKVLNAGV HHHCCCEEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCE VFFAGGDQCQYIRSWKNTKLEKAVASVYRRGGAVGGTSAGAMIMSDFIYDACACEDPIET EEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC KDALEDPYQNITFTYNFFQWSHLRGTIIDTHFDSRKRMGRIMAFIARQIQDGVSRSALGI HHHHHCCCCCEEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHEEE AISEETSVVVDKYGKAKVLGRNAAYFVLGDHPPEICKPRTPLTYSDYKIWRVPCGETFDL EECCCCEEEEECCCCEEEEECCEEEEEECCCCHHHCCCCCCCEECCEEEEECCCCCCCCC NNPPARGYYFRSVKRGRFDSDPY CCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure TRAFPNIAKCWKNFISRLTAYLKLLFQGNTVEVLPALAGPVLNLGGGGPDVEAAIQWMI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCEEECCCCCCCHHHHHHHHH HQVRGTAKVNVVVLRAYGGNDYNHLIYRMSGVNSVQTLVISNRQDANRDDIVQKVLNAGV HHHCCCEEEEEEEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCE VFFAGGDQCQYIRSWKNTKLEKAVASVYRRGGAVGGTSAGAMIMSDFIYDACACEDPIET EEEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC KDALEDPYQNITFTYNFFQWSHLRGTIIDTHFDSRKRMGRIMAFIARQIQDGVSRSALGI HHHHHCCCCCEEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHEEE AISEETSVVVDKYGKAKVLGRNAAYFVLGDHPPEICKPRTPLTYSDYKIWRVPCGETFDL EECCCCEEEEECCCCEEEEECCEEEEEECCCCHHHCCCCCCCEECCEEEEECCCCCCCCC NNPPARGYYFRSVKRGRFDSDPY CCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA