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The map label for this gene is 17229911

Identifier: 17229911

GI number: 17229911

Start: 2904432

End: 2904881

Strand: Reverse

Name: 17229911

Synonym: all2419

Alternate gene names: NA

Gene position: 2904881-2904432 (Counterclockwise)

Preceding gene: 17229912

Following gene: 17229909

Centisome position: 45.29

GC content: 38.89

Gene sequence:

>450_bases
GTGGCTAGTCGTAAAATTTCCGATGCAATTCAGCAACAAATACGTCAACGAGCCTCTGAATTATGTGAATATTGCCACGC
CTCTGAAAAATGGCAGTATGTATTATTTACGGTGGATCATATTATTCCCTTAAGTCAAAACGGTGAAGATACTATAGAGA
ATTTGGCTTTAGCTTGTTTTCATTGCAACCGTAGAAAGTCAGCCAAAACCACAGCTTTAGATCCTGAATCTGGTTTAGAA
GTTCCATTATTTAATCCAAGACAAAGCCTCTGGAGTGAGCATTTTATTTGGTCTGCCGATAAACTAAAAATTAATGGGTT
AACACCGACTGGCAAAGCAACAATAGCGGCGCTAAATTTAAACCGAGAAAGAATTGTGAATATTCGTGCGGCTGACAAAG
TAGTTAACCGCTATCCTCCGCCAGAAGATCCAATCGAAGAAATAAGTTAA

Upstream 100 bases:

>100_bases
GAACTAGATAGCTACGAAGAAATTGACGACTACCTGAGTTTTCTCAATCGCATAGCTCGCAATCTTTTACAAAACCCCCA
ATAACCAGCATTATATAAAT

Downstream 100 bases:

>100_bases
GCATTCAATATTAAGTTAACGTGAGTTCGATAAATTGGGAAGAACCCCTCTCCAAACCTCTCCCCGACGCGGGGAGAGGC
TTAAAACCTTCATTATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Domain Protein; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Nuclease

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MASRKISDAIQQQIRQRASELCEYCHASEKWQYVLFTVDHIIPLSQNGEDTIENLALACFHCNRRKSAKTTALDPESGLE
VPLFNPRQSLWSEHFIWSADKLKINGLTPTGKATIAALNLNRERIVNIRAADKVVNRYPPPEDPIEEIS

Sequences:

>Translated_149_residues
MASRKISDAIQQQIRQRASELCEYCHASEKWQYVLFTVDHIIPLSQNGEDTIENLALACFHCNRRKSAKTTALDPESGLE
VPLFNPRQSLWSEHFIWSADKLKINGLTPTGKATIAALNLNRERIVNIRAADKVVNRYPPPEDPIEEIS
>Mature_148_residues
ASRKISDAIQQQIRQRASELCEYCHASEKWQYVLFTVDHIIPLSQNGEDTIENLALACFHCNRRKSAKTTALDPESGLEV
PLFNPRQSLWSEHFIWSADKLKINGLTPTGKATIAALNLNRERIVNIRAADKVVNRYPPPEDPIEEIS

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16913; Mature: 16782

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRKISDAIQQQIRQRASELCEYCHASEKWQYVLFTVDHIIPLSQNGEDTIENLALACF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHEEECCCCCHHHHHHHHHHHH
HCNRRKSAKTTALDPESGLEVPLFNPRQSLWSEHFIWSADKLKINGLTPTGKATIAALNL
HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEC
NRERIVNIRAADKVVNRYPPPEDPIEEIS
CHHHEEEHHHHHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure 
ASRKISDAIQQQIRQRASELCEYCHASEKWQYVLFTVDHIIPLSQNGEDTIENLALACF
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHEEECCCCCHHHHHHHHHHHH
HCNRRKSAKTTALDPESGLEVPLFNPRQSLWSEHFIWSADKLKINGLTPTGKATIAALNL
HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEC
NRERIVNIRAADKVVNRYPPPEDPIEEIS
CHHHEEEHHHHHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA