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The map label for this gene is 17229898

Identifier: 17229898

GI number: 17229898

Start: 2886721

End: 2887473

Strand: Direct

Name: 17229898

Synonym: alr2406

Alternate gene names: NA

Gene position: 2886721-2887473 (Clockwise)

Preceding gene: 17229897

Following gene: 17229899

Centisome position: 45.01

GC content: 41.83

Gene sequence:

>753_bases
ATGTCTGATGATCTCGATGTTCTTTGGATAAGTTCTAGTCCTGTATTGCAACGTTTTGATAAACCACTGCTACAGTACAT
ATCGAAAGACGTGAATGTAGCGCAGTGGGAATATCGCCATCACAGAGATGAAGGCAGTTCTATAGATGAAGCGGTAGACT
TACTAGCAGAGTTTATGGGGCAGTGTCCTTATCCTGTAAATTTAGCAGGTCATGCGGCGGGTGGGGCGATCGCGCTGAGT
TTTGCTCGTCGGTATCCCAAAAAAGTGCGATCGCTCAGTCTCCTGGCTGTGGCTTCCCAACCAGCCAATACTTGGCACGC
ACACTATTATTTGCAAAGACAACTATTTACCATTAGTCGTGAGCAGATTTTGGCAAATACTGTCCGCAATCTCTTTGGTG
AACAACCATCTCATACTACTAAAAAATTAGTAGCGGTTTTAGATAGAGATTTAGAACAATCTCCTTTGTTACATTCTCTT
TTCAAGTTAGTTCATTTACCCGAAGGTGGCGTAAATATGCCCCTAATGATATGTGGTAGTAAAAATGATCCTATTGTCTC
TTCAACCACATTACAAGACTGGTCAAATTGCTTGAAACCAGAGGATCATCTTTGGGAGTGTCCTAAAGGGCATCATTTTT
TTCACTACTTCTATCCGCAAACAGTAGGCGATCAACTGTTAAATTTTTGGCAACTCCGTCATCTACAGCCAATGCAGACT
TCTTACTTAGTTTCCCATCATTGGCAAAATTAG

Upstream 100 bases:

>100_bases
GACTTCTTTATAATCAACAGTTTATAGCTCTTACTATGGACTGTTGATTATGAATTATTGACTATTGATCAGTATTAATT
CCTAATAATTTGGTGTCTTT

Downstream 100 bases:

>100_bases
TCACACCATGTGCAGCGTTCTCTCAAACCTAAATCTTCATAAGGATTTCCAGAATAAGTTGCACATGGCATGAAATACTT
CTTATGGGAAGTACAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSDDLDVLWISSSPVLQRFDKPLLQYISKDVNVAQWEYRHHRDEGSSIDEAVDLLAEFMGQCPYPVNLAGHAAGGAIALS
FARRYPKKVRSLSLLAVASQPANTWHAHYYLQRQLFTISREQILANTVRNLFGEQPSHTTKKLVAVLDRDLEQSPLLHSL
FKLVHLPEGGVNMPLMICGSKNDPIVSSTTLQDWSNCLKPEDHLWECPKGHHFFHYFYPQTVGDQLLNFWQLRHLQPMQT
SYLVSHHWQN

Sequences:

>Translated_250_residues
MSDDLDVLWISSSPVLQRFDKPLLQYISKDVNVAQWEYRHHRDEGSSIDEAVDLLAEFMGQCPYPVNLAGHAAGGAIALS
FARRYPKKVRSLSLLAVASQPANTWHAHYYLQRQLFTISREQILANTVRNLFGEQPSHTTKKLVAVLDRDLEQSPLLHSL
FKLVHLPEGGVNMPLMICGSKNDPIVSSTTLQDWSNCLKPEDHLWECPKGHHFFHYFYPQTVGDQLLNFWQLRHLQPMQT
SYLVSHHWQN
>Mature_249_residues
SDDLDVLWISSSPVLQRFDKPLLQYISKDVNVAQWEYRHHRDEGSSIDEAVDLLAEFMGQCPYPVNLAGHAAGGAIALSF
ARRYPKKVRSLSLLAVASQPANTWHAHYYLQRQLFTISREQILANTVRNLFGEQPSHTTKKLVAVLDRDLEQSPLLHSLF
KLVHLPEGGVNMPLMICGSKNDPIVSSTTLQDWSNCLKPEDHLWECPKGHHFFHYFYPQTVGDQLLNFWQLRHLQPMQTS
YLVSHHWQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0249

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2406_NOSS1 (Q44510)

Other databases:

- EMBL:   X14577
- EMBL:   BA000019
- PIR:   AG2106
- RefSeq:   NP_486446.1
- ProteinModelPortal:   Q44510
- STRING:   Q44510
- GeneID:   1106003
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2406
- NMPDR:   fig|103690.1.peg.2713
- eggNOG:   COG0596
- HOGENOM:   HBG285424
- OMA:   LLHDYLK
- ProtClustDB:   CLSK893060
- BioCyc:   NSP103690:ALR2406-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28724; Mature: 28593

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDLDVLWISSSPVLQRFDKPLLQYISKDVNVAQWEYRHHRDEGSSIDEAVDLLAEFMG
CCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
QCPYPVNLAGHAAGGAIALSFARRYPKKVRSLSLLAVASQPANTWHAHYYLQRQLFTISR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
EQILANTVRNLFGEQPSHTTKKLVAVLDRDLEQSPLLHSLFKLVHLPEGGVNMPLMICGS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECC
KNDPIVSSTTLQDWSNCLKPEDHLWECPKGHHFFHYFYPQTVGDQLLNFWQLRHLQPMQT
CCCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHH
SYLVSHHWQN
HHHHHHCCCC
>Mature Secondary Structure 
SDDLDVLWISSSPVLQRFDKPLLQYISKDVNVAQWEYRHHRDEGSSIDEAVDLLAEFMG
CCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
QCPYPVNLAGHAAGGAIALSFARRYPKKVRSLSLLAVASQPANTWHAHYYLQRQLFTISR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH
EQILANTVRNLFGEQPSHTTKKLVAVLDRDLEQSPLLHSLFKLVHLPEGGVNMPLMICGS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECC
KNDPIVSSTTLQDWSNCLKPEDHLWECPKGHHFFHYFYPQTVGDQLLNFWQLRHLQPMQT
CCCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHH
SYLVSHHWQN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840