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The map label for this gene is 17229885

Identifier: 17229885

GI number: 17229885

Start: 2876582

End: 2877613

Strand: Direct

Name: 17229885

Synonym: alr2393

Alternate gene names: NA

Gene position: 2876582-2877613 (Clockwise)

Preceding gene: 17229884

Following gene: 17229886

Centisome position: 44.85

GC content: 37.5

Gene sequence:

>1032_bases
GTGAATTTATTATTTAAAGACCTTTTCGGAATATTTAAAATTTTTGAAGATGTTTATGAACGAATCAGAAAAATATTAAT
ACCAACCACAGCTTATTCTTGGCAGACATTCATTTACTTGAGTGTGTTTTCTTGGATAATGTCTTATTTTGCTACAGGTT
ATATCAGAGATATAATTGCTCTTTGCGGTTGGTTATTTTTAATTGCAGGTACAGCTTGGTACACAACTGATGACCCCTTA
AGAGTTCCTGGTACTTTCATGCCAGTAGGCGCAGTGATTACAGGATTTTTAGTTAGTGTGTTTGCTTTTAGTAATCAGGA
AGATGTTATTACATCTAGAACAATAGTCCTTTGGCCGACAATATCAGCATTAATCACAGCAATTCCTGAATTTATTGAAG
GGAGCGACACTGACTCTAAAACTCGGATTCCTAAACCAGATGCTCGACAAAAAATCATTGTTTTAGTTGCCAGTTGTATG
ATGATCAGTTGCTGGCTTCAGTTTTACTTTGTTTTGGATAAATGGTTACAAGAATATCCTAGTTTATTAGCTGAAAACTT
TGGGCGTAGTACTTTTGTCATTACTAGAGAAGAGCAACAAAAAATTCCTACTAATGGAGTTGTAATTTTGGATAGACTGC
AACCATTAGTTGAGGAACAAATTGCTGAAAGACCTTGGTCAGAGGTTGAAAGATGGCTTCTGGAAGCAAATGTTAGAGTT
GGTCAATTAGGTAGGGAAGTGTTAGATAATAATTTGGCACAATATGAAGAAAAAGTACTCTGGCGTGTTGAACCGCGTGT
AGTCAATAATAAGTCAGGCTACAGGTTAGATTTACTCAGTATTTGGACAGGCCCGACTGCTAATCCCCGTGGTTATTTTC
TGCGGAAATCATGCCAAATTGACCCAGTGGCAACAACGCCAATTAATACTACTACTAACAGTAGAATACCGGAGGAGAAA
AAAGCCGTTGCAGAAATACAATGCGATCGCTTGAATAAATTATTCTCAGGTGCAGCGCCACCGCAGCAGTGA

Upstream 100 bases:

>100_bases
ACTCGTTAAGTTACACCGCTATAACTATTATTTTATTGATACGTAATAGGTAGGCGAAAGCAAGAATATTTGTATTTAAA
AATATAAAGGGAGGTAACTT

Downstream 100 bases:

>100_bases
GGGAATGGGTAATGGGGAGAATGACTATGATGAGAACTTTTGTAATTGCTAAGAATGTATTTCAGGAAGTGGTACGCGAT
CGCATCCTGTATATTATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNLLFKDLFGIFKIFEDVYERIRKILIPTTAYSWQTFIYLSVFSWIMSYFATGYIRDIIALCGWLFLIAGTAWYTTDDPL
RVPGTFMPVGAVITGFLVSVFAFSNQEDVITSRTIVLWPTISALITAIPEFIEGSDTDSKTRIPKPDARQKIIVLVASCM
MISCWLQFYFVLDKWLQEYPSLLAENFGRSTFVITREEQQKIPTNGVVILDRLQPLVEEQIAERPWSEVERWLLEANVRV
GQLGREVLDNNLAQYEEKVLWRVEPRVVNNKSGYRLDLLSIWTGPTANPRGYFLRKSCQIDPVATTPINTTTNSRIPEEK
KAVAEIQCDRLNKLFSGAAPPQQ

Sequences:

>Translated_343_residues
MNLLFKDLFGIFKIFEDVYERIRKILIPTTAYSWQTFIYLSVFSWIMSYFATGYIRDIIALCGWLFLIAGTAWYTTDDPL
RVPGTFMPVGAVITGFLVSVFAFSNQEDVITSRTIVLWPTISALITAIPEFIEGSDTDSKTRIPKPDARQKIIVLVASCM
MISCWLQFYFVLDKWLQEYPSLLAENFGRSTFVITREEQQKIPTNGVVILDRLQPLVEEQIAERPWSEVERWLLEANVRV
GQLGREVLDNNLAQYEEKVLWRVEPRVVNNKSGYRLDLLSIWTGPTANPRGYFLRKSCQIDPVATTPINTTTNSRIPEEK
KAVAEIQCDRLNKLFSGAAPPQQ
>Mature_343_residues
MNLLFKDLFGIFKIFEDVYERIRKILIPTTAYSWQTFIYLSVFSWIMSYFATGYIRDIIALCGWLFLIAGTAWYTTDDPL
RVPGTFMPVGAVITGFLVSVFAFSNQEDVITSRTIVLWPTISALITAIPEFIEGSDTDSKTRIPKPDARQKIIVLVASCM
MISCWLQFYFVLDKWLQEYPSLLAENFGRSTFVITREEQQKIPTNGVVILDRLQPLVEEQIAERPWSEVERWLLEANVRV
GQLGREVLDNNLAQYEEKVLWRVEPRVVNNKSGYRLDLLSIWTGPTANPRGYFLRKSCQIDPVATTPINTTTNSRIPEEK
KAVAEIQCDRLNKLFSGAAPPQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2393_NOSS1 (P46079)

Other databases:

- EMBL:   BA000019
- EMBL:   U09240
- EMBL:   S76266
- PIR:   AB2105
- RefSeq:   NP_486433.1
- STRING:   P46079
- GeneID:   1105990
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2393
- NMPDR:   fig|103690.1.peg.2700
- eggNOG:   NOG69118
- HOGENOM:   HBG311992
- OMA:   WLFLIAG
- ProtClustDB:   CLSK516685
- BioCyc:   NSP103690:ALR2393-MONOMER
- InterPro:   IPR020360
- ProDom:   PD079309

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39313; Mature: 39313

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLFKDLFGIFKIFEDVYERIRKILIPTTAYSWQTFIYLSVFSWIMSYFATGYIRDIIA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCGWLFLIAGTAWYTTDDPLRVPGTFMPVGAVITGFLVSVFAFSNQEDVITSRTIVLWPT
HHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEHHH
ISALITAIPEFIEGSDTDSKTRIPKPDARQKIIVLVASCMMISCWLQFYFVLDKWLQEYP
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLAENFGRSTFVITREEQQKIPTNGVVILDRLQPLVEEQIAERPWSEVERWLLEANVRV
HHHHHHCCCCEEEEEECHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
GQLGREVLDNNLAQYEEKVLWRVEPRVVNNKSGYRLDLLSIWTGPTANPRGYFLRKSCQI
HHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCEEEEEEEECCCCCCCCCCEEECCCCC
DPVATTPINTTTNSRIPEEKKAVAEIQCDRLNKLFSGAAPPQQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNLLFKDLFGIFKIFEDVYERIRKILIPTTAYSWQTFIYLSVFSWIMSYFATGYIRDIIA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCGWLFLIAGTAWYTTDDPLRVPGTFMPVGAVITGFLVSVFAFSNQEDVITSRTIVLWPT
HHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEEEHHH
ISALITAIPEFIEGSDTDSKTRIPKPDARQKIIVLVASCMMISCWLQFYFVLDKWLQEYP
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLAENFGRSTFVITREEQQKIPTNGVVILDRLQPLVEEQIAERPWSEVERWLLEANVRV
HHHHHHCCCCEEEEEECHHHCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHH
GQLGREVLDNNLAQYEEKVLWRVEPRVVNNKSGYRLDLLSIWTGPTANPRGYFLRKSCQI
HHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCEEEEEEEECCCCCCCCCCEEECCCCC
DPVATTPINTTTNSRIPEEKKAVAEIQCDRLNKLFSGAAPPQQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 7883709