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The map label for this gene is yfhF [C]

Identifier: 17229877

GI number: 17229877

Start: 2871965

End: 2872321

Strand: Direct

Name: yfhF [C]

Synonym: alr2385

Alternate gene names: 17229877

Gene position: 2871965-2872321 (Clockwise)

Preceding gene: 17229870

Following gene: 17229878

Centisome position: 44.78

GC content: 44.54

Gene sequence:

>357_bases
ATGACACAAGCAACTCAGTCTCAACAAAGCGGGATACTGTTGAGCGAAGCCGCTTTGCGGCAAGTAAAGTCCCTCCAAGA
AAAGCAAGGTCAAGATTTATGCTTGAGGGTAGGAGTACGCCAAGGTGGCTGCTCTGGGATGTCTTACATGATGGACTTTG
AACAGGAAAGCCAGATCACTCCTCAGGATGAAGTTTTTGATTACGATGGCTTCAAAATTGTCTGCGATCGCAAAAGTATT
TTATATCTTTATGGCTTAATGCTTGATTATAGCGATGCCATGATCGGTGGTGGTTTCCAATTTACCAATCCTAATGCTAC
TCAGACCTGCGGTTGCGGTAAGTCATTTGGGGTGTAA

Upstream 100 bases:

>100_bases
CATTGTCGCTAGAATGAATAAAAAAACTAGTAAAGACAAACCAAGGGCAATCACAAGCCCGAAGCGGATATTTTACATCA
TTTAAGGAGTTGAAAAGCGG

Downstream 100 bases:

>100_bases
GATTGTCAATTGTCAGTGGTCAGTTGTTAGTTCCGAGTAACTACTGACTAATGACTAATGACTAATGACTAATAACTAAT
GACTAACACTGTTGATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTQATQSQQSGILLSEAALRQVKSLQEKQGQDLCLRVGVRQGGCSGMSYMMDFEQESQITPQDEVFDYDGFKIVCDRKSI
LYLYGLMLDYSDAMIGGGFQFTNPNATQTCGCGKSFGV

Sequences:

>Translated_118_residues
MTQATQSQQSGILLSEAALRQVKSLQEKQGQDLCLRVGVRQGGCSGMSYMMDFEQESQITPQDEVFDYDGFKIVCDRKSI
LYLYGLMLDYSDAMIGGGFQFTNPNATQTCGCGKSFGV
>Mature_117_residues
TQATQSQQSGILLSEAALRQVKSLQEKQGQDLCLRVGVRQGGCSGMSYMMDFEQESQITPQDEVFDYDGFKIVCDRKSIL
YLYGLMLDYSDAMIGGGFQFTNPNATQTCGCGKSFGV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family. Ycf83 subfamily [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=113, Percent_Identity=31.858407079646, Blast_Score=79, Evalue=1e-15,
Organism=Homo sapiens, GI160420328, Length=85, Percent_Identity=40, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=44.8598130841121, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=39.622641509434, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1787974, Length=108, Percent_Identity=34.2592592592593, Blast_Score=73, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25146411, Length=110, Percent_Identity=33.6363636363636, Blast_Score=78, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI193209025, Length=112, Percent_Identity=33.9285714285714, Blast_Score=78, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6323001, Length=107, Percent_Identity=38.3177570093458, Blast_Score=79, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=38.8888888888889, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12992; Mature: 12861

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQATQSQQSGILLSEAALRQVKSLQEKQGQDLCLRVGVRQGGCSGMSYMMDFEQESQIT
CCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCC
PQDEVFDYDGFKIVCDRKSILYLYGLMLDYSDAMIGGGFQFTNPNATQTCGCGKSFGV
CCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQATQSQQSGILLSEAALRQVKSLQEKQGQDLCLRVGVRQGGCSGMSYMMDFEQESQIT
CCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCC
PQDEVFDYDGFKIVCDRKSILYLYGLMLDYSDAMIGGGFQFTNPNATQTCGCGKSFGV
CCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCEECCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]