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The map label for this gene is infC [C]

Identifier: 17229860

GI number: 17229860

Start: 2851802

End: 2852236

Strand: Reverse

Name: infC [C]

Synonym: all2368

Alternate gene names: 17229860

Gene position: 2852236-2851802 (Counterclockwise)

Preceding gene: 17229862

Following gene: 17229859

Centisome position: 44.47

GC content: 43.22

Gene sequence:

>435_bases
TTGATTGACCATGAGAATAACAATCGTGGTTTAATCGATACCTACGAAGCTCTACAATTAGCCCAGAGTGTAGAGCTTGA
CCTAGTTGTAGTTTCGCAAAGCAAAGACACTCCAGTAGCGAAAATTCTTAACTACGGTAAGCTACAGTATCAGAAGAAAA
AACGCCAGGGTCAAAGTGCTAGACCCACCGTCAAAGAAGTCCGATTCCGCCCCAACGTTGGTGCGGCTGATTATAATTTA
CGTATTGAGCAAGCGCTTCAGTGGTTGAGTAAAGGTGATTCCGTTAAATTTGCTATTCGTTTACGGGGTCGGGAAAATCA
ATATCGAGAACAAGCCGGACAAATGCTAGAACGCATTGTGACTGATCTGAGTCAAGTAGGAAAAGTCCAGTCACTTGATA
AACGCTCGCTCATTGTTCAAATTATGCCCGCTTAA

Upstream 100 bases:

>100_bases
AGTAATACTTGCAAGACAGAGCATTGAAAATTAGGAGGAAGCGATTATCGTAGTCCAAAAGCAGCTGATTAATTCCCAAA
TCAAGTCACCCCAGGTCTTC

Downstream 100 bases:

>100_bases
AGCTTAAAATACTCTCAGCGCTCTATGCTTTGTTGCGTAGAGCGCTAATTGTTTATTTCAGGAGAGTATATCTATATAAA
AGATATAAATCTCGTAATTA

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MIDHENNNRGLIDTYEALQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSARPTVKEVRFRPNVGAADYNL
RIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQVGKVQSLDKRSLIVQIMPA

Sequences:

>Translated_144_residues
MIDHENNNRGLIDTYEALQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSARPTVKEVRFRPNVGAADYNL
RIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQVGKVQSLDKRSLIVQIMPA
>Mature_144_residues
MIDHENNNRGLIDTYEALQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSARPTVKEVRFRPNVGAADYNL
RIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIVTDLSQVGKVQSLDKRSLIVQIMPA

Specific function: IF-3 Binds To The 30s Ribosomal Subunit And Shifts The Equilibrum Between 70s Ribosomes And Their 50s And 30s Subunits In Favor Of The Free Subunits, Thus Enhancing The Availability Of 30s Subunits On Which Protein Synthesis Initiation Begins. IF-3 Is Als

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=147, Percent_Identity=30.6122448979592, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 16439; Mature: 16439

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00938 IF3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDHENNNRGLIDTYEALQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSA
CCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCC
RPTVKEVRFRPNVGAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIV
CCHHHHHEECCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
TDLSQVGKVQSLDKRSLIVQIMPA
HHHHHHCCHHCCCCCCEEEEEECC
>Mature Secondary Structure
MIDHENNNRGLIDTYEALQLAQSVELDLVVVSQSKDTPVAKILNYGKLQYQKKKRQGQSA
CCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCC
RPTVKEVRFRPNVGAADYNLRIEQALQWLSKGDSVKFAIRLRGRENQYREQAGQMLERIV
CCHHHHHEECCCCCCCCCCEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
TDLSQVGKVQSLDKRSLIVQIMPA
HHHHHHCCHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]