| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is lpxA [H]
Identifier: 17229764
GI number: 17229764
Start: 2735644
End: 2736402
Strand: Direct
Name: lpxA [H]
Synonym: alr2272
Alternate gene names: 17229764
Gene position: 2735644-2736402 (Clockwise)
Preceding gene: 17229763
Following gene: 17229765
Centisome position: 42.65
GC content: 47.04
Gene sequence:
>759_bases GTGCAAGTCGGTGCTTATGCTGTGATTGGAGCGCACGTCAAAGTCGGCCCGGAAACAATTATTGGCGCTCATGCTGTGAT AGAAGGGCCTTGTGAGATTGGGGCGCGAAATCAGATTTTTACAGGTGCAGCTATCGGCATGGAACCGCAGGATCTCAAGT TTGTGGGAGAACCAACCTGGGTCAAAATTGGCGACAATAACTTGATTCGGGAGTATGTCACCATTAACCGGGCAACTGGA GCAGGAGAAGCCACAATTATTGGCAATAATAATTTGTTAATGGCTTACACTCACGTAGCTCATAATTGTGTAGTTGAAGA CTCCGTAGTCATAGCCAACTCTGTCGCTTTGGCTGGTCATGTCCACATCGAATCACGCGCTAGGTTAAGCGGTGTTTTAG GTGTTCATCAATTCGTACGTATTGGTAGACAGGCAATGGTAGGTGGAATGGCACGAATTGACCGTGATGTACCGCCATAT ATGTTGGTAGAAGGTAATCCAGGCAGGATTAGAACCCTCAATTTGGTGGGACTCAAGCGCTCTGGTATGGAAGCCAGCGA CCTGCAACTGCTCAAAAAAGCTTTTCGTATCCTTTACCGTTCTAACTTGCTCTTTAAAGAAGCATTAGAAGAGTTGGAAA CCTTAGGTGATACAGAACACTTACAACACCTGCGCCGCTTCCTATTGCTATCACAAATGCCAGGAAGACGGGGCTTAATT CCCGGCAGAGGAAAATCGGGTGGGAGTGATGAATCATAG
Upstream 100 bases:
>100_bases CAAAGCACTGGCTCCTCAAGACAGTTCTGGAGATTCACCCTTGAAGACGCTTATTCATCCAACTGCTGTAATTCATCCAA ATTCGGAACTGCACCCAACG
Downstream 100 bases:
>100_bases GCAGGAGGTAGGAAGCAGAGGAGCCGGGTGGCAGGGGGCAGGGGGCAGGGGAGCAGGGGAGCAGAGGAGAGAAGTTACTC AACGATTTTCCCCTTCCCCA
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MQVGAYAVIGAHVKVGPETIIGAHAVIEGPCEIGARNQIFTGAAIGMEPQDLKFVGEPTWVKIGDNNLIREYVTINRATG AGEATIIGNNNLLMAYTHVAHNCVVEDSVVIANSVALAGHVHIESRARLSGVLGVHQFVRIGRQAMVGGMARIDRDVPPY MLVEGNPGRIRTLNLVGLKRSGMEASDLQLLKKAFRILYRSNLLFKEALEELETLGDTEHLQHLRRFLLLSQMPGRRGLI PGRGKSGGSDES
Sequences:
>Translated_252_residues MQVGAYAVIGAHVKVGPETIIGAHAVIEGPCEIGARNQIFTGAAIGMEPQDLKFVGEPTWVKIGDNNLIREYVTINRATG AGEATIIGNNNLLMAYTHVAHNCVVEDSVVIANSVALAGHVHIESRARLSGVLGVHQFVRIGRQAMVGGMARIDRDVPPY MLVEGNPGRIRTLNLVGLKRSGMEASDLQLLKKAFRILYRSNLLFKEALEELETLGDTEHLQHLRRFLLLSQMPGRRGLI PGRGKSGGSDES >Mature_252_residues MQVGAYAVIGAHVKVGPETIIGAHAVIEGPCEIGARNQIFTGAAIGMEPQDLKFVGEPTWVKIGDNNLIREYVTINRATG AGEATIIGNNNLLMAYTHVAHNCVVEDSVVIANSVALAGHVHIESRARLSGVLGVHQFVRIGRQAMVGGMARIDRDVPPY MLVEGNPGRIRTLNLVGLKRSGMEASDLQLLKKAFRILYRSNLLFKEALEELETLGDTEHLQHLRRFLLLSQMPGRRGLI PGRGKSGGSDES
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=218, Percent_Identity=40.8256880733945, Blast_Score=179, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 27288; Mature: 27288
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVGAYAVIGAHVKVGPETIIGAHAVIEGPCEIGARNQIFTGAAIGMEPQDLKFVGEPTW CCCCCEEEEECEEEECCHHHEECHHEEECCCCCCCCCCEEECEECCCCCCCCEEECCCCE VKIGDNNLIREYVTINRATGAGEATIIGNNNLLMAYTHVAHNCVVEDSVVIANSVALAGH EEECCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEHHHHCEEECCCEEEEECEEEEEE VHIESRARLSGVLGVHQFVRIGRQAMVGGMARIDRDVPPYMLVEGNPGRIRTLNLVGLKR EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECC SGMEASDLQLLKKAFRILYRSNLLFKEALEELETLGDTEHLQHLRRFLLLSQMPGRRGLI CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC PGRGKSGGSDES CCCCCCCCCCCC >Mature Secondary Structure MQVGAYAVIGAHVKVGPETIIGAHAVIEGPCEIGARNQIFTGAAIGMEPQDLKFVGEPTW CCCCCEEEEECEEEECCHHHEECHHEEECCCCCCCCCCEEECEECCCCCCCCEEECCCCE VKIGDNNLIREYVTINRATGAGEATIIGNNNLLMAYTHVAHNCVVEDSVVIANSVALAGH EEECCCCCEEEEEEEECCCCCCCEEEEECCCEEEEEEHHHHCEEECCCEEEEECEEEEEE VHIESRARLSGVLGVHQFVRIGRQAMVGGMARIDRDVPPYMLVEGNPGRIRTLNLVGLKR EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEEECC SGMEASDLQLLKKAFRILYRSNLLFKEALEELETLGDTEHLQHLRRFLLLSQMPGRRGLI CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC PGRGKSGGSDES CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA