Click here to switch to the map view.

The map label for this gene is omp85 [H]

Identifier: 17229761

GI number: 17229761

Start: 2731307

End: 2733808

Strand: Direct

Name: omp85 [H]

Synonym: alr2269

Alternate gene names: 17229761

Gene position: 2731307-2733808 (Clockwise)

Preceding gene: 17229760

Following gene: 17229762

Centisome position: 42.59

GC content: 48.16

Gene sequence:

>2502_bases
GTGGCGGCTGTAGCAATCACAGCACCCTTGAGTAGTTCATTAACTGCAAATGCCCAAACTCCTACAAATTCAGAACAAAC
ATTAGAGGCGATCGCCCCAGCGACAAATCAGCAGCCAGAACAAGATGTGCGTTCAGAATCCCCGGAGGATTTCACAACTG
TCAAGGCGCTGGCAGATATGCAATCCCCATCTGTGGAATTCTCAACAGATAAGTCAACTAAATCCGCAGCAACGACGAAA
AAAGATGTAATTGTACCCACTTTAGAGACATTAGTGGCTACAAAACCGCCCATTCAAGAAAGCAACCCTACGACTAAGAT
AGCGTCTGTAGAAATTGGCAAACCAACATCGACTGCGGTTTTTAGGAGTCAGTATCAGACAATAAATTATGGTAGTTATG
GGCGATCGCTCACATCAGGTGTTAGCGCATCACCATCACCACAGAAAACAGCAAATTTACCCTCACCAGCTCCTAACCCC
CTGGAAACTAGAGCGACAACAGCCAAGCAACTTGTACAAGCCCCAGAACAACCTGCACCCCAGCCAGAAGTAGCCCCCCC
AACCACCGAGCAACCAGCACCTGCACCAGCCCCTGGGACTACACCAGGGACAGAAAATTTCAACACTCCTAACGCCACAC
CTGAAACCACAGAACCCCGTGTATTAGTTTCAGAAGTCCTCGTAAGACCGCAATCAGGACAACTAACTCCCGAATTAGAA
ACCCAAGTTTATAACGTAATTCGTACTCAGCCAGGACGGACAACCACCCGTTCCCAGTTACAAGAAGATATTAACGCTAT
CTTTGGCACAGGCTTTTTCTCCAACGTCCAAGCATCACCAGAAGATACACCATTAGGGGTGCGAGTCAGCTTCATCGTCC
AGCCCAACCCCGTCTTAAGCAAAGTAGAAATTCAAGCCAACCCTGGGACTAACGTTCCCTCAGTCCTACCCCAGGCTACT
GCTGATGAAATTTTCCGCGCTCAGTATGGCAAAATTCTCAACTTGCGGGATTTACAAGAAGGGATTAAGGAATTAACCAA
ACGTTATCAAGACCAAGGTTACGTTCTCGCCAATGTTGTAGGCGCGCCCCAGGTTTCCGAAAATGGAGTTGTCACCCTGC
AAGTAGCCGAAGGGGTCGTTGAGAATATTAGCGTCCGCTTTCGCAACAAAGAAGGACAGGATGTCAACGAACAAGGACAA
CCAATTCGGGGACGGACACAGGACTATATCATCACGCGAGAAGTGGAATTGAAACCAGGACAGGTATTCAACCGCAACAC
CGTCCAGAAAGACCTACAACGCGTATTCGGGACAGGATTGTTTGAAGATGTCAATGTTTCCCTTGACCCCGGTACAGACC
CCACCAAGGTGAATGTGGTGGTAAATGTGGTAGAACGCAGCAGTGGTTCAATTGCGGCTGGTGCTGGTATCAGTTCTTCT
AGTGGTTTGTTTGGTACAGTCAGCTATCAACAGCAAAACCTCAACGGCAGAAATCAAAAACTAGGCGCAGAAGTACAACT
AGGCGAACGAGAATTGTTGTTTGACCTGCGGTTCACCGACCCTTGGATTGGTGGTGATCCTTACCGCACCTCTTACACCG
CCAATATTTTCCGCCGTCGTTCTATCTCCTTGATTTTCGACGGGAAGGACGAAGATATCAGAACATTCGACCCTGGTAAT
CCTAATGATACAAACGGGCAAGACCGTCCTCGTGTCACCCGTCTAGGTGGTGGTGTTACCTTCACCCGCCCTCTATCGGC
TAATCCTTTTGAAAGAGCAGAATGGACAGCCTCAGCAGGTTTGCAGTATCAGCGAGTTAGTACCCGCGATGCTGATGGTA
ACTTGAGAAAAGACGGGGCTGTGTTTGATGATAATGGCAACCGCACCAGTGAAATCGTTCCCCTCAGCTTTTCTGGGACG
GGAGAAGATGACTTATTACTAGTGCAACTAGGCGCACAGCGCGACCTCCGCAATAATCCCTTGCAGCCTACTAGCGGTTC
TTTCTTACGTTTTGGTGTAGATCAATCAGTACCTGTCGGCTCAGGTAATATTTTCCTCACTAGGTTCCGGGGTAGCTACA
GTCAATATCTCCCCGTGAAATTTACAGGTTTTAGCAAAGGGCCGGAAACCATAGCCTTTAACATCCAAGGTGGCACAGTC
CTTGGTGATTTGCCCCCCTATGAAGCCTTTACCCTTGGTGGTAGTAACTCAGTACGTGGTTATGAAGAAGGTGCTTTAGG
TAGCGGACGCAGTTTTGTGCAAGCATCTGTTGAGTATCGTTTTCCTGTTTTCTCTGTAGTTAGTGGCGCTCTATTTTTTG
ACGTTGGTAGCGACTTAGGAACCAGTACCAGAACTGCTGAAGTGCTGAATAAAAGCGGTAGCGGCTACGGTTATGGTCTT
GGTGTACGTGTGCAATCACCATTGGGGCCAATTCGTATTGACTATGGTATCAACGATGACGGTGATAGCCGCATCAATTT
CGGTATTGGAGAAAGGTTTTAG

Upstream 100 bases:

>100_bases
TTTTTTTACCTTTGGCATAAACAAGCAATTGCCTGGTAATGGTGTGTGGATGTGAAGAGGAAGAAAGGAATTAAAGACGA
TGCGTTTATCTCCCGTATTA

Downstream 100 bases:

>100_bases
GTTGCTTAACTGTTAACGGCTACGGATTTTCAGGGTGTTTACCAAAGATGAATTATGAATAACAAAAATCTCTATATACT
GGCTGTATTCGTATGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 833; Mature: 832

Protein sequence:

>833_residues
MAAVAITAPLSSSLTANAQTPTNSEQTLEAIAPATNQQPEQDVRSESPEDFTTVKALADMQSPSVEFSTDKSTKSAATTK
KDVIVPTLETLVATKPPIQESNPTTKIASVEIGKPTSTAVFRSQYQTINYGSYGRSLTSGVSASPSPQKTANLPSPAPNP
LETRATTAKQLVQAPEQPAPQPEVAPPTTEQPAPAPAPGTTPGTENFNTPNATPETTEPRVLVSEVLVRPQSGQLTPELE
TQVYNVIRTQPGRTTTRSQLQEDINAIFGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLSKVEIQANPGTNVPSVLPQAT
ADEIFRAQYGKILNLRDLQEGIKELTKRYQDQGYVLANVVGAPQVSENGVVTLQVAEGVVENISVRFRNKEGQDVNEQGQ
PIRGRTQDYIITREVELKPGQVFNRNTVQKDLQRVFGTGLFEDVNVSLDPGTDPTKVNVVVNVVERSSGSIAAGAGISSS
SGLFGTVSYQQQNLNGRNQKLGAEVQLGERELLFDLRFTDPWIGGDPYRTSYTANIFRRRSISLIFDGKDEDIRTFDPGN
PNDTNGQDRPRVTRLGGGVTFTRPLSANPFERAEWTASAGLQYQRVSTRDADGNLRKDGAVFDDNGNRTSEIVPLSFSGT
GEDDLLLVQLGAQRDLRNNPLQPTSGSFLRFGVDQSVPVGSGNIFLTRFRGSYSQYLPVKFTGFSKGPETIAFNIQGGTV
LGDLPPYEAFTLGGSNSVRGYEEGALGSGRSFVQASVEYRFPVFSVVSGALFFDVGSDLGTSTRTAEVLNKSGSGYGYGL
GVRVQSPLGPIRIDYGINDDGDSRINFGIGERF

Sequences:

>Translated_833_residues
MAAVAITAPLSSSLTANAQTPTNSEQTLEAIAPATNQQPEQDVRSESPEDFTTVKALADMQSPSVEFSTDKSTKSAATTK
KDVIVPTLETLVATKPPIQESNPTTKIASVEIGKPTSTAVFRSQYQTINYGSYGRSLTSGVSASPSPQKTANLPSPAPNP
LETRATTAKQLVQAPEQPAPQPEVAPPTTEQPAPAPAPGTTPGTENFNTPNATPETTEPRVLVSEVLVRPQSGQLTPELE
TQVYNVIRTQPGRTTTRSQLQEDINAIFGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLSKVEIQANPGTNVPSVLPQAT
ADEIFRAQYGKILNLRDLQEGIKELTKRYQDQGYVLANVVGAPQVSENGVVTLQVAEGVVENISVRFRNKEGQDVNEQGQ
PIRGRTQDYIITREVELKPGQVFNRNTVQKDLQRVFGTGLFEDVNVSLDPGTDPTKVNVVVNVVERSSGSIAAGAGISSS
SGLFGTVSYQQQNLNGRNQKLGAEVQLGERELLFDLRFTDPWIGGDPYRTSYTANIFRRRSISLIFDGKDEDIRTFDPGN
PNDTNGQDRPRVTRLGGGVTFTRPLSANPFERAEWTASAGLQYQRVSTRDADGNLRKDGAVFDDNGNRTSEIVPLSFSGT
GEDDLLLVQLGAQRDLRNNPLQPTSGSFLRFGVDQSVPVGSGNIFLTRFRGSYSQYLPVKFTGFSKGPETIAFNIQGGTV
LGDLPPYEAFTLGGSNSVRGYEEGALGSGRSFVQASVEYRFPVFSVVSGALFFDVGSDLGTSTRTAEVLNKSGSGYGYGL
GVRVQSPLGPIRIDYGINDDGDSRINFGIGERF
>Mature_832_residues
AAVAITAPLSSSLTANAQTPTNSEQTLEAIAPATNQQPEQDVRSESPEDFTTVKALADMQSPSVEFSTDKSTKSAATTKK
DVIVPTLETLVATKPPIQESNPTTKIASVEIGKPTSTAVFRSQYQTINYGSYGRSLTSGVSASPSPQKTANLPSPAPNPL
ETRATTAKQLVQAPEQPAPQPEVAPPTTEQPAPAPAPGTTPGTENFNTPNATPETTEPRVLVSEVLVRPQSGQLTPELET
QVYNVIRTQPGRTTTRSQLQEDINAIFGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLSKVEIQANPGTNVPSVLPQATA
DEIFRAQYGKILNLRDLQEGIKELTKRYQDQGYVLANVVGAPQVSENGVVTLQVAEGVVENISVRFRNKEGQDVNEQGQP
IRGRTQDYIITREVELKPGQVFNRNTVQKDLQRVFGTGLFEDVNVSLDPGTDPTKVNVVVNVVERSSGSIAAGAGISSSS
GLFGTVSYQQQNLNGRNQKLGAEVQLGERELLFDLRFTDPWIGGDPYRTSYTANIFRRRSISLIFDGKDEDIRTFDPGNP
NDTNGQDRPRVTRLGGGVTFTRPLSANPFERAEWTASAGLQYQRVSTRDADGNLRKDGAVFDDNGNRTSEIVPLSFSGTG
EDDLLLVQLGAQRDLRNNPLQPTSGSFLRFGVDQSVPVGSGNIFLTRFRGSYSQYLPVKFTGFSKGPETIAFNIQGGTVL
GDLPPYEAFTLGGSNSVRGYEEGALGSGRSFVQASVEYRFPVFSVVSGALFFDVGSDLGTSTRTAEVLNKSGSGYGYGLG
VRVQSPLGPIRIDYGINDDGDSRINFGIGERF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 89634; Mature: 89503

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
0.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVAITAPLSSSLTANAQTPTNSEQTLEAIAPATNQQPEQDVRSESPEDFTTVKALADM
CCEEEEECCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHC
QSPSVEFSTDKSTKSAATTKKDVIVPTLETLVATKPPIQESNPTTKIASVEIGKPTSTAV
CCCCEEECCCCCCHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHH
FRSQYQTINYGSYGRSLTSGVSASPSPQKTANLPSPAPNPLETRATTAKQLVQAPEQPAP
HHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QPEVAPPTTEQPAPAPAPGTTPGTENFNTPNATPETTEPRVLVSEVLVRPQSGQLTPELE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
TQVYNVIRTQPGRTTTRSQLQEDINAIFGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
KVEIQANPGTNVPSVLPQATADEIFRAQYGKILNLRDLQEGIKELTKRYQDQGYVLANVV
EEEEEECCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
GAPQVSENGVVTLQVAEGVVENISVRFRNKEGQDVNEQGQPIRGRTQDYIITREVELKPG
CCCCCCCCCEEEEEEHHCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
QVFNRNTVQKDLQRVFGTGLFEDVNVSLDPGTDPTKVNVVVNVVERSSGSIAAGAGISSS
CCCCCHHHHHHHHHHHCCCCEECCEEEECCCCCCEEEEEEEEEEECCCCCEEECCCCCCC
SGLFGTVSYQQQNLNGRNQKLGAEVQLGERELLFDLRFTDPWIGGDPYRTSYTANIFRRR
CCCEEEEEEHHCCCCCCCCCCCCEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCC
SISLIFDGKDEDIRTFDPGNPNDTNGQDRPRVTRLGGGVTFTRPLSANPFERAEWTASAG
EEEEEECCCCCCCEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHCC
LQYQRVSTRDADGNLRKDGAVFDDNGNRTSEIVPLSFSGTGEDDLLLVQLGAQRDLRNNP
CEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC
LQPTSGSFLRFGVDQSVPVGSGNIFLTRFRGSYSQYLPVKFTGFSKGPETIAFNIQGGTV
CCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCEE
LGDLPPYEAFTLGGSNSVRGYEEGALGSGRSFVQASVEYRFPVFSVVSGALFFDVGSDLG
ECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCEEEEECCCCCC
TSTRTAEVLNKSGSGYGYGLGVRVQSPLGPIRIDYGINDDGDSRINFGIGERF
CCHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
AAVAITAPLSSSLTANAQTPTNSEQTLEAIAPATNQQPEQDVRSESPEDFTTVKALADM
CEEEEECCCCCCCEECCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHC
QSPSVEFSTDKSTKSAATTKKDVIVPTLETLVATKPPIQESNPTTKIASVEIGKPTSTAV
CCCCEEECCCCCCHHHCCCCCCEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHH
FRSQYQTINYGSYGRSLTSGVSASPSPQKTANLPSPAPNPLETRATTAKQLVQAPEQPAP
HHHHCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
QPEVAPPTTEQPAPAPAPGTTPGTENFNTPNATPETTEPRVLVSEVLVRPQSGQLTPELE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
TQVYNVIRTQPGRTTTRSQLQEDINAIFGTGFFSNVQASPEDTPLGVRVSFIVQPNPVLS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
KVEIQANPGTNVPSVLPQATADEIFRAQYGKILNLRDLQEGIKELTKRYQDQGYVLANVV
EEEEEECCCCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
GAPQVSENGVVTLQVAEGVVENISVRFRNKEGQDVNEQGQPIRGRTQDYIITREVELKPG
CCCCCCCCCEEEEEEHHCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
QVFNRNTVQKDLQRVFGTGLFEDVNVSLDPGTDPTKVNVVVNVVERSSGSIAAGAGISSS
CCCCCHHHHHHHHHHHCCCCEECCEEEECCCCCCEEEEEEEEEEECCCCCEEECCCCCCC
SGLFGTVSYQQQNLNGRNQKLGAEVQLGERELLFDLRFTDPWIGGDPYRTSYTANIFRRR
CCCEEEEEEHHCCCCCCCCCCCCEEEECCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCC
SISLIFDGKDEDIRTFDPGNPNDTNGQDRPRVTRLGGGVTFTRPLSANPFERAEWTASAG
EEEEEECCCCCCCEECCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHCC
LQYQRVSTRDADGNLRKDGAVFDDNGNRTSEIVPLSFSGTGEDDLLLVQLGAQRDLRNNP
CEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC
LQPTSGSFLRFGVDQSVPVGSGNIFLTRFRGSYSQYLPVKFTGFSKGPETIAFNIQGGTV
CCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCEE
LGDLPPYEAFTLGGSNSVRGYEEGALGSGRSFVQASVEYRFPVFSVVSGALFFDVGSDLG
ECCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCEEEEECCCCCC
TSTRTAEVLNKSGSGYGYGLGVRVQSPLGPIRIDYGINDDGDSRINFGIGERF
CCHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]