| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is cph2 [H]
Identifier: 17229731
GI number: 17229731
Start: 2686257
End: 2691380
Strand: Reverse
Name: cph2 [H]
Synonym: all2239
Alternate gene names: 17229731
Gene position: 2691380-2686257 (Counterclockwise)
Preceding gene: 17229735
Following gene: 17229730
Centisome position: 41.96
GC content: 42.06
Gene sequence:
>5124_bases ATGAATCAACGCTCCCCTCTAACCATTTTGCTGATTGATGATTGCGCCGAAGATCGGGAGATATATCGTTTGTTTTTGCA GCAGGATAGATTACATACCTACGAGATTTTTCAATTTGAGACAGCACAAGAGGCAATGGCATGGTGTGAGCAACAGACAC CAGATGTGATTTTGCTGGATTATTTACTGCCGGATCACGATGGATTAGAGTTTTTGCAAAAACTAAGAGAACACCTAAAT AATAACCAATCTGCTGTGATTATGCTCACAGGACAAGGTGACGAAAGTGTCGCTGTCTGTGCTATGAAAAATGGCGCTCA AGATTATTTGGTGAAAAATTCTCTGACACCGGAAACCTTACAAAGTACAATTCATTATGCTGTAGAACGGATGCTGCTGA CAAGACAGTTAGAAAAAAGTCGGCAACAGCAACAGCTAATGGTGGCGATCGCTTTAATAATTAGGCAATCCCTGAAGCTA GAAGATATTTTGAGTGTCACAGTCGCGGAAGTGCGCCAGTTTTTGCAAGCAGACCGGGTACTAATCTATCAATTTCAACC CGATATGAGTGGAATTGTGGTCGCAGAGTCTATACTTCCCGGTTGGATAGCGACGAAAGGAGCGCAAATTGAAGATAAGT GCTTTCAAGATAGTGCAGGACATAACCATCAACTAAAAAAACGAGCGATTAATGATATTTATCAGGCAGGCTTAACGAAC TGTTATTTAGAACTACTAGAGCAGTTTCAAGTTAAAGCCACTCTGATAGTACCCATTATGGTGACAAATAAATCATGGGG ATTATTAATTGCTCACCAATGTGCTGCACCCCATCATTGGCAGTCATTTGAACTGGACTTATTGGAGCAGTTGGCGGTGC AGATAGCGATCGCAATTCAGCAAGCCAGTGCCTATGAGCAAATACAGACGGAACTACAAGAACGAAAACGAGTAGAAGCA ACTCTCCGCGAGAGCGAACAACGGTTTCGCCAGATGGCTGATACGGCTCCCGTACTGATTTGGATGTCGGGACTCGATAA ACTTTGCTACTACTTCAATAAAACCTGGTTAGATTTTACTGGCAAAACCTTAGAAAAAGAAGTAGGTGATGGTTGGGTTC AAGGAGTGCATCCCGATGACTTAAAAGATTGCTTAGACACTTACGTCAATGCCTTTGATGCCCGCCAAAATTTTCAAATG GAATATCGGCTCAAACGCTTTGATGGACAATATTGTTGGATTTTGGATACAGGCACTCCCCGTTTCACCACGGAAGGAGT GTTTCTGGGTTATATCGGTTCCTGTGTAGATATTAGCGAACGGAAGCAAACAGAAGCTGCTCTACAGCAGAACGAAGAGC GATTAACTATGGCTCTAGATGCTGCGTGTATGGGTAACTGGGAATGGAATATTCAAACAGGTGGAATTCACTGGTCGGAG AATTTGGAAAAACTATTTGGCATGGTTCCGGGAACCTTCAATGGTCATTTTGAAATGGTTGTGTCGCTGATACACCCAGA TGATCGAGAGAGGGTTTTACAATCCATTAATTGTGCTGTCTACAACAGAGAAGATTACAACATCGAATTTCGCTTTATTA AACTTGATGGTACGCCACGTTGGGCGCTCAGTAGAGGTAAAGTTTTCTACGACCAAAACGGTAACCCTCTGCGGATGAGT GGTATAGATTTTGATATCACAGAACGCAAACAGGCGGAGTCTGCCCTGCAAGAGAGTGAAGCGCGGTTTCAGGCTTTTAT GAATAACAGCCCCTCAGCTTCCTGGATTACCGATGACCACGGCCGAATGCTTTATCTAAGCCAGACCTATGTCCGTACCT TTCAACTGCCATTTGACAAGGTAGAGGATGTGACGGGCAAAACAGTTTTTGAGCTTTATACCCCAGAAGTAGCCCAGCCG TTTTTGGATAATATTCACCGGGTAGCACAAACGCAACAAATCCTCGAAACCATTGAAAAAGCTCCCAGATTGGATGGTAC GTTGGGGGATTTTTTAGTCTATAAATTCCCCTTACCTGCAACTACGGGGGAATTATTTATTGGTGGTGTAGCAGTTGATA TTAGCGATAAAATTCGGGCAGAACAGGCATTACAAAAACTTAATCAAGAACTGGAAGCGAGAGTTGCAGAACGCACTGCC GCTTTAAGGGAAAGTGAAGAACGCTGGCATTTGGCACTAAGAGGCAGCAATGATGGCATCTGGGACAGAAACATCACAAC TAATGAAGTTTTCTTCTCAATTCGATGGGAAGAAATGTTGGGCTTTAGCAGTGAGGAACTGGGGCGAAATCGAGAATCAT GGTTAAGCCGGATTCATCCTGATGATCACGATCGCATTATGAAGGCGATCGCCGACCATTTAGCCCACAAAACACCCTTT TTCCAAGAAGAATATCGGCTACAGCGCAAAGATGGCTCCTATATATGGATATTAGATCGGGGTCAGGCTTTATGGGATGA ATCAGGCAATGCTATTCGCATGAGCGGCTCGGCAACAGATATTACTAAACGCAAGGAAACAGAAGCTCAGTTATTAACCG TTTCCGAATTGCAACAAGCGATTCTTTCAAGCATCGATTATGCAGTCATTTCTACCAATTCCGAGGGCATAATTCAAACT TTTAACCTTGCTGCTCAAAAGATGTTGGGTTACTCAGCCGATGAGGTGATTGGTAAGTTAACACCAAACATTTTTCATGA GCCAGAGGAACTCAAACAACGGATGAATGAACTCAAACAAGAGATGGGTAGAGAAGTTACCCCTGAGGATTTCCTGGTCA AAACCCAGCAAGATAGTGATGAATTAGAATGGACTTTTATTCGTAAAGATGGTTCGCGTTTCCCTGTTGCTCTCTCGGTT AAACCCATGTTTAATCAAGAGGGAAAGCCTATCGGTGGTGTGGGAATTGCCAAAGATATTACTCAGCAAAAACAGATAGA AGCTCAACTTCGCAAAAATACCTCTACTCTTGCTGCGGCACAAAGAATTGCTCATTTGGGCAGTTGGGAACTGGATTTGT CAACGCAAAACTTAATCTGGTCACAAGAGGTTTTTCGCATATTTGGCCACCATCCTGAGTCCGGGACACCAAGTTACGAC GAAATGCTTGATTGTATTCATCCGGATGATCGCAACTACCACGATGTTGTCTTACATCAAGCTATTACACAAAGACAAGC TTATGAACTAGAGTATCGTTTTTATCGCGCTGACGGCAGTTTGGGTTATTTACTATCACGAGGCGAAGTTATATTAAACA CTCATGGGCAACCATACCAGTTAATCAGCACTATCTTAGACATTACTGAGCGTAAACAAACAGAAGAAAAACTACGTAAC CTTTCAGATCGACTGACCTTGGCAGTCAGCTCAGCCAATCTCGGTATTTGGGACTGGGATATGATACAGGAAGCGGAATG GGATAACCGAATGTATGAACTATATGATTTGCAAGGGTTTGAGAATAAAGTAAAGTCCCAAGATTGGATAGATAGGCTCC ATCCAGATGACCGAGATGAAGCAATGATGGCCTTTGAAGATGCCATCAAGGGAGTCAGAGAATTTGATACAGAATTTCGG ATTGTTCTAAAAAATGGCGGTATCCGCTTTATCAAAGCCTCCGCTTTAGTTCAACGCAATGAGTGGGGTGAACCACTACG CATGGTTGGGATTAACTATGATATTACCGAGCGCAAACAAGTAGAAGCCGCCTTACGGGAAAGTGAAAAGCGCTATGCTA CCTTGACAGAAGCGGCTCCCGTTGCTATTTTTCGGCTTGATACTGCTAGTAATTGTATTTACGTCAACGAACGTTGGAGT TTAATGACGGGTAAACCAACACAAGCGGCATTGCAGAAAGGATGGTTAGAAAATATCCATGAAGAAGATCGCTATCACCT GGTGGTAGATTGTTCTGGCCCCTGCGGAAAACAATGTAGTTCATTTGAAACTTGTCGGCGAGAGGTAAGATATGTACGTC CAGACGGCAGCATCACCTGGTTCTACATCCAGATAGTACCCGAAACCGACCTAAATGGAAATATCCTTGGTTATATAGGT AGCTTGACAGATATCACCGCCCGCAAAAAAATCGAGTCCGAAGTTATTCACCATCGTGATTTGCGAGAAGCAATTTTTAA TGAATCAGCCGATGCTCTTTTTTTAGTAGACATAGACACGCAATTAATTTTTGATTGTAATGACCGTGCAGTTGATTTGT TTGAAGTGGACAATAAGGAAGAATTACTCAATATTCAGGGAAACACACTACAACGTTACCAATTTACTCCCGAACAATTG GGTGAAATTACCCAGGAACTAAATCAAAAATCTTGGTGGAGTCGAGAAATTGAATATGCCACTCGCAAAGGTAATTTTTT CTGGGGGAATTTAGCTGCCAAACAAATTACTGTAGCTGGTCAGGGGATTAATTTAGTACGATTGTCTGATATTAGCGATC GCAAACAAGCTGTAGAACAAATACAGCGATCGCTAGATGAAAAAGAAACCTTACTCAAAGAAATTCATCATCGGGTTAAA AACAACCTGCAAATAATCTCTAGTTTGCTCAGGATGCAATCTAGACGTTCTTTTGATGAAACAACTTTGTTGCTATTTAC AGAATCCCAAAATCGTGTACAGTCGATGGCTTTGATTCACGAGCAACTTTATCAGTCAGCAGATATTAATCAAATTAACT TTAGCGACTACATCAAAAATCTGACAGATAGCTTATTTCGTTGCTATGGGGTCAGTCAAAAGAATATAATGATCAATATA GAAACAAACAGCATTAAATTGGATCTAGATAATGCTATTCCCTGCGGATTAATCATTAATGAGTTGGTGTCTAATTGCCT GAAATACGCATTTCCAGAACAAAAACAAGGCAATAAGATTATAATTTCCCTGGAAACCGTCCCAGGAAATCAATTAACTC TCTTAGTTAAAGATAACGGTATTGGCATTCCCGAAACATTAGATTGGGAAAATGCCAACTCTTTAGGCTTAAGAATTGTC AAAAACCTCGTGAGGCAAATCAAAGGCAAGATTCTTTTAGAGCGCGATCGTGGTACTACTTTCTCCATTCGCTTCCCCCA ATAA
Upstream 100 bases:
>100_bases CTATTTTTAGATATAGCTTGATTTAAGAAGAATTTTTAATTCAGCAAATAGAGAATCTCAATTTTTTGACGAAATCCGAT CGCCTTTTTGTATATAGCTT
Downstream 100 bases:
>100_bases TTACCACAGCACCAAAGACTGGCGCAAGCCAGAATGGTCAAAATAAGCCTGTACTGTTGCCGTAATAGTCCATGTTAATC AGGTAGTGTATCTTATTGTT
Product: two-component hybrid sensor and regulator
Products: NA
Alternate protein names: Bacteriophytochrome cph2 [H]
Number of amino acids: Translated: 1707; Mature: 1707
Protein sequence:
>1707_residues MNQRSPLTILLIDDCAEDREIYRLFLQQDRLHTYEIFQFETAQEAMAWCEQQTPDVILLDYLLPDHDGLEFLQKLREHLN NNQSAVIMLTGQGDESVAVCAMKNGAQDYLVKNSLTPETLQSTIHYAVERMLLTRQLEKSRQQQQLMVAIALIIRQSLKL EDILSVTVAEVRQFLQADRVLIYQFQPDMSGIVVAESILPGWIATKGAQIEDKCFQDSAGHNHQLKKRAINDIYQAGLTN CYLELLEQFQVKATLIVPIMVTNKSWGLLIAHQCAAPHHWQSFELDLLEQLAVQIAIAIQQASAYEQIQTELQERKRVEA TLRESEQRFRQMADTAPVLIWMSGLDKLCYYFNKTWLDFTGKTLEKEVGDGWVQGVHPDDLKDCLDTYVNAFDARQNFQM EYRLKRFDGQYCWILDTGTPRFTTEGVFLGYIGSCVDISERKQTEAALQQNEERLTMALDAACMGNWEWNIQTGGIHWSE NLEKLFGMVPGTFNGHFEMVVSLIHPDDRERVLQSINCAVYNREDYNIEFRFIKLDGTPRWALSRGKVFYDQNGNPLRMS GIDFDITERKQAESALQESEARFQAFMNNSPSASWITDDHGRMLYLSQTYVRTFQLPFDKVEDVTGKTVFELYTPEVAQP FLDNIHRVAQTQQILETIEKAPRLDGTLGDFLVYKFPLPATTGELFIGGVAVDISDKIRAEQALQKLNQELEARVAERTA ALRESEERWHLALRGSNDGIWDRNITTNEVFFSIRWEEMLGFSSEELGRNRESWLSRIHPDDHDRIMKAIADHLAHKTPF FQEEYRLQRKDGSYIWILDRGQALWDESGNAIRMSGSATDITKRKETEAQLLTVSELQQAILSSIDYAVISTNSEGIIQT FNLAAQKMLGYSADEVIGKLTPNIFHEPEELKQRMNELKQEMGREVTPEDFLVKTQQDSDELEWTFIRKDGSRFPVALSV KPMFNQEGKPIGGVGIAKDITQQKQIEAQLRKNTSTLAAAQRIAHLGSWELDLSTQNLIWSQEVFRIFGHHPESGTPSYD EMLDCIHPDDRNYHDVVLHQAITQRQAYELEYRFYRADGSLGYLLSRGEVILNTHGQPYQLISTILDITERKQTEEKLRN LSDRLTLAVSSANLGIWDWDMIQEAEWDNRMYELYDLQGFENKVKSQDWIDRLHPDDRDEAMMAFEDAIKGVREFDTEFR IVLKNGGIRFIKASALVQRNEWGEPLRMVGINYDITERKQVEAALRESEKRYATLTEAAPVAIFRLDTASNCIYVNERWS LMTGKPTQAALQKGWLENIHEEDRYHLVVDCSGPCGKQCSSFETCRREVRYVRPDGSITWFYIQIVPETDLNGNILGYIG SLTDITARKKIESEVIHHRDLREAIFNESADALFLVDIDTQLIFDCNDRAVDLFEVDNKEELLNIQGNTLQRYQFTPEQL GEITQELNQKSWWSREIEYATRKGNFFWGNLAAKQITVAGQGINLVRLSDISDRKQAVEQIQRSLDEKETLLKEIHHRVK NNLQIISSLLRMQSRRSFDETTLLLFTESQNRVQSMALIHEQLYQSADINQINFSDYIKNLTDSLFRCYGVSQKNIMINI ETNSIKLDLDNAIPCGLIINELVSNCLKYAFPEQKQGNKIIISLETVPGNQLTLLVKDNGIGIPETLDWENANSLGLRIV KNLVRQIKGKILLERDRGTTFSIRFPQ
Sequences:
>Translated_1707_residues MNQRSPLTILLIDDCAEDREIYRLFLQQDRLHTYEIFQFETAQEAMAWCEQQTPDVILLDYLLPDHDGLEFLQKLREHLN NNQSAVIMLTGQGDESVAVCAMKNGAQDYLVKNSLTPETLQSTIHYAVERMLLTRQLEKSRQQQQLMVAIALIIRQSLKL EDILSVTVAEVRQFLQADRVLIYQFQPDMSGIVVAESILPGWIATKGAQIEDKCFQDSAGHNHQLKKRAINDIYQAGLTN CYLELLEQFQVKATLIVPIMVTNKSWGLLIAHQCAAPHHWQSFELDLLEQLAVQIAIAIQQASAYEQIQTELQERKRVEA TLRESEQRFRQMADTAPVLIWMSGLDKLCYYFNKTWLDFTGKTLEKEVGDGWVQGVHPDDLKDCLDTYVNAFDARQNFQM EYRLKRFDGQYCWILDTGTPRFTTEGVFLGYIGSCVDISERKQTEAALQQNEERLTMALDAACMGNWEWNIQTGGIHWSE NLEKLFGMVPGTFNGHFEMVVSLIHPDDRERVLQSINCAVYNREDYNIEFRFIKLDGTPRWALSRGKVFYDQNGNPLRMS GIDFDITERKQAESALQESEARFQAFMNNSPSASWITDDHGRMLYLSQTYVRTFQLPFDKVEDVTGKTVFELYTPEVAQP FLDNIHRVAQTQQILETIEKAPRLDGTLGDFLVYKFPLPATTGELFIGGVAVDISDKIRAEQALQKLNQELEARVAERTA ALRESEERWHLALRGSNDGIWDRNITTNEVFFSIRWEEMLGFSSEELGRNRESWLSRIHPDDHDRIMKAIADHLAHKTPF FQEEYRLQRKDGSYIWILDRGQALWDESGNAIRMSGSATDITKRKETEAQLLTVSELQQAILSSIDYAVISTNSEGIIQT FNLAAQKMLGYSADEVIGKLTPNIFHEPEELKQRMNELKQEMGREVTPEDFLVKTQQDSDELEWTFIRKDGSRFPVALSV KPMFNQEGKPIGGVGIAKDITQQKQIEAQLRKNTSTLAAAQRIAHLGSWELDLSTQNLIWSQEVFRIFGHHPESGTPSYD EMLDCIHPDDRNYHDVVLHQAITQRQAYELEYRFYRADGSLGYLLSRGEVILNTHGQPYQLISTILDITERKQTEEKLRN LSDRLTLAVSSANLGIWDWDMIQEAEWDNRMYELYDLQGFENKVKSQDWIDRLHPDDRDEAMMAFEDAIKGVREFDTEFR IVLKNGGIRFIKASALVQRNEWGEPLRMVGINYDITERKQVEAALRESEKRYATLTEAAPVAIFRLDTASNCIYVNERWS LMTGKPTQAALQKGWLENIHEEDRYHLVVDCSGPCGKQCSSFETCRREVRYVRPDGSITWFYIQIVPETDLNGNILGYIG SLTDITARKKIESEVIHHRDLREAIFNESADALFLVDIDTQLIFDCNDRAVDLFEVDNKEELLNIQGNTLQRYQFTPEQL GEITQELNQKSWWSREIEYATRKGNFFWGNLAAKQITVAGQGINLVRLSDISDRKQAVEQIQRSLDEKETLLKEIHHRVK NNLQIISSLLRMQSRRSFDETTLLLFTESQNRVQSMALIHEQLYQSADINQINFSDYIKNLTDSLFRCYGVSQKNIMINI ETNSIKLDLDNAIPCGLIINELVSNCLKYAFPEQKQGNKIIISLETVPGNQLTLLVKDNGIGIPETLDWENANSLGLRIV KNLVRQIKGKILLERDRGTTFSIRFPQ >Mature_1707_residues MNQRSPLTILLIDDCAEDREIYRLFLQQDRLHTYEIFQFETAQEAMAWCEQQTPDVILLDYLLPDHDGLEFLQKLREHLN NNQSAVIMLTGQGDESVAVCAMKNGAQDYLVKNSLTPETLQSTIHYAVERMLLTRQLEKSRQQQQLMVAIALIIRQSLKL EDILSVTVAEVRQFLQADRVLIYQFQPDMSGIVVAESILPGWIATKGAQIEDKCFQDSAGHNHQLKKRAINDIYQAGLTN CYLELLEQFQVKATLIVPIMVTNKSWGLLIAHQCAAPHHWQSFELDLLEQLAVQIAIAIQQASAYEQIQTELQERKRVEA TLRESEQRFRQMADTAPVLIWMSGLDKLCYYFNKTWLDFTGKTLEKEVGDGWVQGVHPDDLKDCLDTYVNAFDARQNFQM EYRLKRFDGQYCWILDTGTPRFTTEGVFLGYIGSCVDISERKQTEAALQQNEERLTMALDAACMGNWEWNIQTGGIHWSE NLEKLFGMVPGTFNGHFEMVVSLIHPDDRERVLQSINCAVYNREDYNIEFRFIKLDGTPRWALSRGKVFYDQNGNPLRMS GIDFDITERKQAESALQESEARFQAFMNNSPSASWITDDHGRMLYLSQTYVRTFQLPFDKVEDVTGKTVFELYTPEVAQP FLDNIHRVAQTQQILETIEKAPRLDGTLGDFLVYKFPLPATTGELFIGGVAVDISDKIRAEQALQKLNQELEARVAERTA ALRESEERWHLALRGSNDGIWDRNITTNEVFFSIRWEEMLGFSSEELGRNRESWLSRIHPDDHDRIMKAIADHLAHKTPF FQEEYRLQRKDGSYIWILDRGQALWDESGNAIRMSGSATDITKRKETEAQLLTVSELQQAILSSIDYAVISTNSEGIIQT FNLAAQKMLGYSADEVIGKLTPNIFHEPEELKQRMNELKQEMGREVTPEDFLVKTQQDSDELEWTFIRKDGSRFPVALSV KPMFNQEGKPIGGVGIAKDITQQKQIEAQLRKNTSTLAAAQRIAHLGSWELDLSTQNLIWSQEVFRIFGHHPESGTPSYD EMLDCIHPDDRNYHDVVLHQAITQRQAYELEYRFYRADGSLGYLLSRGEVILNTHGQPYQLISTILDITERKQTEEKLRN LSDRLTLAVSSANLGIWDWDMIQEAEWDNRMYELYDLQGFENKVKSQDWIDRLHPDDRDEAMMAFEDAIKGVREFDTEFR IVLKNGGIRFIKASALVQRNEWGEPLRMVGINYDITERKQVEAALRESEKRYATLTEAAPVAIFRLDTASNCIYVNERWS LMTGKPTQAALQKGWLENIHEEDRYHLVVDCSGPCGKQCSSFETCRREVRYVRPDGSITWFYIQIVPETDLNGNILGYIG SLTDITARKKIESEVIHHRDLREAIFNESADALFLVDIDTQLIFDCNDRAVDLFEVDNKEELLNIQGNTLQRYQFTPEQL GEITQELNQKSWWSREIEYATRKGNFFWGNLAAKQITVAGQGINLVRLSDISDRKQAVEQIQRSLDEKETLLKEIHHRVK NNLQIISSLLRMQSRRSFDETTLLLFTESQNRVQSMALIHEQLYQSADINQINFSDYIKNLTDSLFRCYGVSQKNIMINI ETNSIKLDLDNAIPCGLIINELVSNCLKYAFPEQKQGNKIIISLETVPGNQLTLLVKDNGIGIPETLDWENANSLGLRIV KNLVRQIKGKILLERDRGTTFSIRFPQ
Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 GGDEF domains [H]
Homologues:
Organism=Escherichia coli, GI1788381, Length=332, Percent_Identity=30.7228915662651, Blast_Score=140, Evalue=1e-33, Organism=Escherichia coli, GI1786599, Length=123, Percent_Identity=30.0813008130081, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR003018 - InterPro: IPR016132 - InterPro: IPR001294 - InterPro: IPR013515 [H]
Pfam domain/function: PF00563 EAL; PF01590 GAF; PF00990 GGDEF; PF00360 Phytochrome [H]
EC number: NA
Molecular weight: Translated: 196495; Mature: 196495
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS50046 PHYTOCHROME_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRSPLTILLIDDCAEDREIYRLFLQQDRLHTYEIFQFETAQEAMAWCEQQTPDVILLD CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCEEEEE YLLPDHDGLEFLQKLREHLNNNQSAVIMLTGQGDESVAVCAMKNGAQDYLVKNSLTPETL EECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCHHHHEECCCCHHHH QSTIHYAVERMLLTRQLEKSRQQQQLMVAIALIIRQSLKLEDILSVTVAEVRQFLQADRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCE LIYQFQPDMSGIVVAESILPGWIATKGAQIEDKCFQDSAGHNHQLKKRAINDIYQAGLTN EEEEECCCCCCEEEEHHHCCCHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH CYLELLEQFQVKATLIVPIMVTNKSWGLLIAHQCAAPHHWQSFELDLLEQLAVQIAIAIQ HHHHHHHHHCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH QASAYEQIQTELQERKRVEATLRESEQRFRQMADTAPVLIWMSGLDKLCYYFNKTWLDFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHEECC GKTLEKEVGDGWVQGVHPDDLKDCLDTYVNAFDARQNFQMEYRLKRFDGQYCWILDTGTP CCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCEEEEEECCCC RFTTEGVFLGYIGSCVDISERKQTEAALQQNEERLTMALDAACMGNWEWNIQTGGIHWSE CEEECCEEEEHHCCCCCHHHHHHHHHHHHCCHHHHHHEEHHHHCCCEEEEEEECCEEHHH NLEKLFGMVPGTFNGHFEMVVSLIHPDDRERVLQSINCAVYNREDYNIEFRFIKLDGTPR HHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCEEEEEEEEECCCCC WALSRGKVFYDQNGNPLRMSGIDFDITERKQAESALQESEARFQAFMNNSPSASWITDDH EEECCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC GRMLYLSQTYVRTFQLPFDKVEDVTGKTVFELYTPEVAQPFLDNIHRVAQTQQILETIEK CCEEEEEHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH APRLDGTLGDFLVYKFPLPATTGELFIGGVAVDISDKIRAEQALQKLNQELEARVAERTA CCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH ALRESEERWHLALRGSNDGIWDRNITTNEVFFSIRWEEMLGFSSEELGRNRESWLSRIHP HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHHCCCHHHHHHHCCC DDHDRIMKAIADHLAHKTPFFQEEYRLQRKDGSYIWILDRGQALWDESGNAIRMSGSATD CHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCEEEECCCCCC ITKRKETEAQLLTVSELQQAILSSIDYAVISTNSEGIIQTFNLAAQKMLGYSADEVIGKL CHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHC TPNIFHEPEELKQRMNELKQEMGREVTPEDFLVKTQQDSDELEWTFIRKDGSRFPVALSV CCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCEEEEEEEECCCCCCEEEEE KPMFNQEGKPIGGVGIAKDITQQKQIEAQLRKNTSTLAAAQRIAHLGSWELDLSTQNLIW CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCCCHHHH SQEVFRIFGHHPESGTPSYDEMLDCIHPDDRNYHDVVLHQAITQRQAYELEYRFYRADGS HHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCC LGYLLSRGEVILNTHGQPYQLISTILDITERKQTEEKLRNLSDRLTLAVSSANLGIWDWD EEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECCCCCCCCHH MIQEAEWDNRMYELYDLQGFENKVKSQDWIDRLHPDDRDEAMMAFEDAIKGVREFDTEFR HHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE IVLKNGGIRFIKASALVQRNEWGEPLRMVGINYDITERKQVEAALRESEKRYATLTEAAP EEEECCCEEEEEHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEHHCCCC VAIFRLDTASNCIYVNERWSLMTGKPTQAALQKGWLENIHEEDRYHLVVDCSGPCGKQCS EEEEEEECCCCEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC SFETCRREVRYVRPDGSITWFYIQIVPETDLNGNILGYIGSLTDITARKKIESEVIHHRD HHHHHHHHHEEECCCCCEEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH LREAIFNESADALFLVDIDTQLIFDCNDRAVDLFEVDNKEELLNIQGNTLQRYQFTPEQL HHHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEECCCHHHEEECCCCEEEEEECCHHHH GEITQELNQKSWWSREIEYATRKGNFFWGNLAAKQITVAGQGINLVRLSDISDRKQAVEQ HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCEEEEEECCCCHHHHHHHH IQRSLDEKETLLKEIHHRVKNNLQIISSLLRMQSRRSFDETTLLLFTESQNRVQSMALIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHH EQLYQSADINQINFSDYIKNLTDSLFRCYGVSQKNIMINIETNSIKLDLDNAIPCGLIIN HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCHHHHHH ELVSNCLKYAFPEQKQGNKIIISLETVPGNQLTLLVKDNGIGIPETLDWENANSLGLRIV HHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHH KNLVRQIKGKILLERDRGTTFSIRFPQ HHHHHHHCCCEEEEECCCCEEEEECCC >Mature Secondary Structure MNQRSPLTILLIDDCAEDREIYRLFLQQDRLHTYEIFQFETAQEAMAWCEQQTPDVILLD CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCCCCEEEEE YLLPDHDGLEFLQKLREHLNNNQSAVIMLTGQGDESVAVCAMKNGAQDYLVKNSLTPETL EECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCHHHHEECCCCHHHH QSTIHYAVERMLLTRQLEKSRQQQQLMVAIALIIRQSLKLEDILSVTVAEVRQFLQADRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCE LIYQFQPDMSGIVVAESILPGWIATKGAQIEDKCFQDSAGHNHQLKKRAINDIYQAGLTN EEEEECCCCCCEEEEHHHCCCHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH CYLELLEQFQVKATLIVPIMVTNKSWGLLIAHQCAAPHHWQSFELDLLEQLAVQIAIAIQ HHHHHHHHHCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH QASAYEQIQTELQERKRVEATLRESEQRFRQMADTAPVLIWMSGLDKLCYYFNKTWLDFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCHHEECC GKTLEKEVGDGWVQGVHPDDLKDCLDTYVNAFDARQNFQMEYRLKRFDGQYCWILDTGTP CCHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCEEEEEECCCC RFTTEGVFLGYIGSCVDISERKQTEAALQQNEERLTMALDAACMGNWEWNIQTGGIHWSE CEEECCEEEEHHCCCCCHHHHHHHHHHHHCCHHHHHHEEHHHHCCCEEEEEEECCEEHHH NLEKLFGMVPGTFNGHFEMVVSLIHPDDRERVLQSINCAVYNREDYNIEFRFIKLDGTPR HHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCEEEECCCCCEEEEEEEEECCCCC WALSRGKVFYDQNGNPLRMSGIDFDITERKQAESALQESEARFQAFMNNSPSASWITDDH EEECCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC GRMLYLSQTYVRTFQLPFDKVEDVTGKTVFELYTPEVAQPFLDNIHRVAQTQQILETIEK CCEEEEEHHHHHHCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH APRLDGTLGDFLVYKFPLPATTGELFIGGVAVDISDKIRAEQALQKLNQELEARVAERTA CCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH ALRESEERWHLALRGSNDGIWDRNITTNEVFFSIRWEEMLGFSSEELGRNRESWLSRIHP HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHCCCHHHHCCCHHHHHHHCCC DDHDRIMKAIADHLAHKTPFFQEEYRLQRKDGSYIWILDRGQALWDESGNAIRMSGSATD CHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCEEEECCCCCC ITKRKETEAQLLTVSELQQAILSSIDYAVISTNSEGIIQTFNLAAQKMLGYSADEVIGKL CHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHC TPNIFHEPEELKQRMNELKQEMGREVTPEDFLVKTQQDSDELEWTFIRKDGSRFPVALSV CCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCEEEEEEEECCCCCCEEEEE KPMFNQEGKPIGGVGIAKDITQQKQIEAQLRKNTSTLAAAQRIAHLGSWELDLSTQNLIW CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCCCHHHH SQEVFRIFGHHPESGTPSYDEMLDCIHPDDRNYHDVVLHQAITQRQAYELEYRFYRADGS HHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCC LGYLLSRGEVILNTHGQPYQLISTILDITERKQTEEKLRNLSDRLTLAVSSANLGIWDWD EEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECCCCCCCCHH MIQEAEWDNRMYELYDLQGFENKVKSQDWIDRLHPDDRDEAMMAFEDAIKGVREFDTEFR HHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE IVLKNGGIRFIKASALVQRNEWGEPLRMVGINYDITERKQVEAALRESEKRYATLTEAAP EEEECCCEEEEEHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHEEHHCCCC VAIFRLDTASNCIYVNERWSLMTGKPTQAALQKGWLENIHEEDRYHLVVDCSGPCGKQCS EEEEEEECCCCEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC SFETCRREVRYVRPDGSITWFYIQIVPETDLNGNILGYIGSLTDITARKKIESEVIHHRD HHHHHHHHHEEECCCCCEEEEEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH LREAIFNESADALFLVDIDTQLIFDCNDRAVDLFEVDNKEELLNIQGNTLQRYQFTPEQL HHHHHHCCCCCEEEEEEECCEEEEECCCCEEEEEECCCHHHEEECCCCEEEEEECCHHHH GEITQELNQKSWWSREIEYATRKGNFFWGNLAAKQITVAGQGINLVRLSDISDRKQAVEQ HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEEECCCEEEEEECCCCHHHHHHHH IQRSLDEKETLLKEIHHRVKNNLQIISSLLRMQSRRSFDETTLLLFTESQNRVQSMALIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHH EQLYQSADINQINFSDYIKNLTDSLFRCYGVSQKNIMINIETNSIKLDLDNAIPCGLIIN HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCHHHHHH ELVSNCLKYAFPEQKQGNKIIISLETVPGNQLTLLVKDNGIGIPETLDWENANSLGLRIV HHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHH KNLVRQIKGKILLERDRGTTFSIRFPQ HHHHHHHCCCEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 10978170; 11063585 [H]