Click here to switch to the map view.

The map label for this gene is phnD [H]

Identifier: 17229720

GI number: 17229720

Start: 2671097

End: 2672098

Strand: Reverse

Name: phnD [H]

Synonym: all2228

Alternate gene names: 17229720

Gene position: 2672098-2671097 (Counterclockwise)

Preceding gene: 17229721

Following gene: 17229719

Centisome position: 41.66

GC content: 36.43

Gene sequence:

>1002_bases
ATGAACAGAAGGTTATTTATTCAGCAGGCTTCTTTATTTACCCTAACTTTGGCAAGTTCCAAGATACTTTCAGCCTGTAA
TTCCAACGCTAATGATAGTAGCGCAGCACTTAAAGAAATTAACTTTGGTGTTCTGTCTACAGAATCTCAAGATAATCAAA
AACCAATTTGGGAACCTTTTGCTGCTGCTATGTCTCAGGAAGTTGGCATCCCCATTAAACCATTCTATGTTACACAGTAT
GCCGCAGTTATAGAAGCTATGCGCTTTGGTAAAGTTCAAGCAGCTTGGTTAGGTGGTAAATCTTATATTGAAGCAGCGAG
AGTTGCTAATGCAGAAGCTTTTGCTCAGGTTGTCAGTGCAGATGGAACTAGAGGCTACTATTCTCATTTAATTGCTAATA
AAGATAATCCTATTACGGCGGAAGCTAAAGCAGTCGGTGGTGATAAATATGTGATTCAGAATGCTGCTAAACTTACCTTT
GCTTTTAATGAACCCAATTCTACATCTGGGTTTTTAGTTCCTAGTTACTATATTTTTACAAAAAATAATATTGAACCTAA
AAAAGCTTTTAAACGCTTGATTTTTGCAGGTAATCATGAAGCTTGCGCTCTGGCTGTAGCAAATAAACAGGTAGATGTAG
CTACTGTCAGCAATGAAGCATTAAGTCGTTTGGAAAGAACCAATCCTACAGCTCGACAGAAGATTGAAATTATTTGGCAA
TCACCGCTAATTCCTAGTGATCCGATTGTTTATCGTCAGGACTTACCAGCAGATATTAAAAACAGGTTGCAAAAGTTTTT
CTATAACTATAAAGATGCAAAAGTTTTAACACCATTTGAAATTTCTGGTTTTGTGCAGGCTGAAGACAAAAATTGGCATA
CAATTCGAGAATTAGAAATTGCTAAAAAAATTCAAGAGACTCAAGCTAAAGAAAATCTGAGCGCGCAAGAAAAACAGCAA
AAAATAGCAGAACTGAATCAGCAACTCAAAGAGATTCAATAA

Upstream 100 bases:

>100_bases
CGCGCGCTTCAAGGACGTTAATTATTTTTTGTGTTGACTGTTGACTGTTGACGGTTAACTGTTGACAGTTAACAAACCTC
TTTACCTCACAACTAGGTTT

Downstream 100 bases:

>100_bases
ATTTACATTTATAGGTATAAAAAAGTGCAATCGCAACATCAGCTAATTAGTAACTTGTCACCTAGCGTAGTAGCAATGTT
AGAGCAAGAAGCAAAACTTG

Product: ABC tranporter, phosphate-binding protein

Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNRRLFIQQASLFTLTLASSKILSACNSNANDSSAALKEINFGVLSTESQDNQKPIWEPFAAAMSQEVGIPIKPFYVTQY
AAVIEAMRFGKVQAAWLGGKSYIEAARVANAEAFAQVVSADGTRGYYSHLIANKDNPITAEAKAVGGDKYVIQNAAKLTF
AFNEPNSTSGFLVPSYYIFTKNNIEPKKAFKRLIFAGNHEACALAVANKQVDVATVSNEALSRLERTNPTARQKIEIIWQ
SPLIPSDPIVYRQDLPADIKNRLQKFFYNYKDAKVLTPFEISGFVQAEDKNWHTIRELEIAKKIQETQAKENLSAQEKQQ
KIAELNQQLKEIQ

Sequences:

>Translated_333_residues
MNRRLFIQQASLFTLTLASSKILSACNSNANDSSAALKEINFGVLSTESQDNQKPIWEPFAAAMSQEVGIPIKPFYVTQY
AAVIEAMRFGKVQAAWLGGKSYIEAARVANAEAFAQVVSADGTRGYYSHLIANKDNPITAEAKAVGGDKYVIQNAAKLTF
AFNEPNSTSGFLVPSYYIFTKNNIEPKKAFKRLIFAGNHEACALAVANKQVDVATVSNEALSRLERTNPTARQKIEIIWQ
SPLIPSDPIVYRQDLPADIKNRLQKFFYNYKDAKVLTPFEISGFVQAEDKNWHTIRELEIAKKIQETQAKENLSAQEKQQ
KIAELNQQLKEIQ
>Mature_333_residues
MNRRLFIQQASLFTLTLASSKILSACNSNANDSSAALKEINFGVLSTESQDNQKPIWEPFAAAMSQEVGIPIKPFYVTQY
AAVIEAMRFGKVQAAWLGGKSYIEAARVANAEAFAQVVSADGTRGYYSHLIANKDNPITAEAKAVGGDKYVIQNAAKLTF
AFNEPNSTSGFLVPSYYIFTKNNIEPKKAFKRLIFAGNHEACALAVANKQVDVATVSNEALSRLERTNPTARQKIEIIWQ
SPLIPSDPIVYRQDLPADIKNRLQKFFYNYKDAKVLTPFEISGFVQAEDKNWHTIRELEIAKKIQETQAKENLSAQEKQQ
KIAELNQQLKEIQ

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates [H]

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790543, Length=336, Percent_Identity=41.0714285714286, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017797
- InterPro:   IPR005770 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37147; Mature: 37147

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRLFIQQASLFTLTLASSKILSACNSNANDSSAALKEINFGVLSTESQDNQKPIWEPF
CCCEEEEEECCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCHHHH
AAAMSQEVGIPIKPFYVTQYAAVIEAMRFGKVQAAWLGGKSYIEAARVANAEAFAQVVSA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHC
DGTRGYYSHLIANKDNPITAEAKAVGGDKYVIQNAAKLTFAFNEPNSTSGFLVPSYYIFT
CCCCHHHHHHHCCCCCCCEEEHHHCCCCCEEEECCEEEEEEECCCCCCCCEEEEEEEEEE
KNNIEPKKAFKRLIFAGNHEACALAVANKQVDVATVSNEALSRLERTNPTARQKIEIIWQ
CCCCCHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHCCCHHHHEEEEEEE
SPLIPSDPIVYRQDLPADIKNRLQKFFYNYKDAKVLTPFEISGFVQAEDKNWHTIRELEI
CCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEECCEEECCEEEECCCCCHHHHHHHH
AKKIQETQAKENLSAQEKQQKIAELNQQLKEIQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRRLFIQQASLFTLTLASSKILSACNSNANDSSAALKEINFGVLSTESQDNQKPIWEPF
CCCEEEEEECCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCHHHH
AAAMSQEVGIPIKPFYVTQYAAVIEAMRFGKVQAAWLGGKSYIEAARVANAEAFAQVVSA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHC
DGTRGYYSHLIANKDNPITAEAKAVGGDKYVIQNAAKLTFAFNEPNSTSGFLVPSYYIFT
CCCCHHHHHHHCCCCCCCEEEHHHCCCCCEEEECCEEEEEEECCCCCCCCEEEEEEEEEE
KNNIEPKKAFKRLIFAGNHEACALAVANKQVDVATVSNEALSRLERTNPTARQKIEIIWQ
CCCCCHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCHHHHHHHHHCCCHHHHEEEEEEE
SPLIPSDPIVYRQDLPADIKNRLQKFFYNYKDAKVLTPFEISGFVQAEDKNWHTIRELEI
CCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEECCEEECCEEEECCCCCHHHHHHHH
AKKIQETQAKENLSAQEKQQKIAELNQQLKEIQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]

Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]