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The map label for this gene is ydjX [C]

Identifier: 17229699

GI number: 17229699

Start: 2645595

End: 2646443

Strand: Direct

Name: ydjX [C]

Synonym: alr2207

Alternate gene names: 17229699

Gene position: 2645595-2646443 (Clockwise)

Preceding gene: 17229698

Following gene: 17229700

Centisome position: 41.25

GC content: 42.4

Gene sequence:

>849_bases
ATGTTACAACCTACAAGTATTAATTTGATAATTCTCCAAAGTCACAAGAGAACTATCGCAGATATGCCAACCAGGAACTG
GCAAAAGTTGATTAGGCTTGTTTTCCTGATGCTGCTGGCATTTGGTGTTACCTTAATATTGGCTACAGAACCAGCTTTTG
GACAAGAATCGGCTCAAAACGCTCCAGGGTTTAATCCCCAAGCATGGTTAAAAAATGCTTTGCAGTGGATTGATGGTCTT
GGTGCTGTGGGAGCATTAGCATTTATCCTCCTTTATATCATTGCCACTGTTGCCTTTTTACCAGGATCAATCCTTACTCT
CGGTGCAGGTGTGGTCTTTGGCGTGGTTTGGGGTTCGCTTTATGTCTTCATTGGTGCAACTATAGGTGCTACCGCCGCTT
TCTTGGTCGGACGTTATTTGGCTAGGGGATGGGTTGCTAAGAAGATTGTCGGGAATCAGAAATTTCGGGCGATTGATGAA
GCGGTAGGTAGAGAAGGGCTGAAAATTGTACTATTAACGCGACTTTCTCCTATATTCCCTTTCAATTTGTTGAACTATGC
CTATGGCGTAACAGGAGTTTCCCTCAAAGATTATGTTCTTGCTTCCATTGGCATGATTCCCGGTACAATTATGTATGTTT
ATATCGGTTCTTTAGCTGGTAGTATTGCCACTATTGGTACTGAATCTCAACCTGGGAATCCTGGCGTACAGTGGGCAATT
CGGATTATCGGCTTTATCGCTACGGTTGCTGTGACAATTTATGTGACTAAAGTTGCTCGCAAGGCTTTAGAAGATGAAGT
TTTAGAGTCCACAAACGATGATGAAAATAAACAAATCAACCTGAATTAG

Upstream 100 bases:

>100_bases
CAAAATTGTCCTCCTGTCTTGCCCTTCAAGCTGTTAAATTACGCCTTTGGTGTGACTCAGAAAGCTTTAAACACAACTGT
TTAATCGGGAGAAATCACCC

Downstream 100 bases:

>100_bases
TTAATCAAAGACTTATTTCGTAGTTGGGGACTTTATATTGCCAAAGGTGCATTTGAAAAAGAATCTCCTTTATTTTGTGA
ACCTGGGTTTTTCTTAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MLQPTSINLIILQSHKRTIADMPTRNWQKLIRLVFLMLLAFGVTLILATEPAFGQESAQNAPGFNPQAWLKNALQWIDGL
GAVGALAFILLYIIATVAFLPGSILTLGAGVVFGVVWGSLYVFIGATIGATAAFLVGRYLARGWVAKKIVGNQKFRAIDE
AVGREGLKIVLLTRLSPIFPFNLLNYAYGVTGVSLKDYVLASIGMIPGTIMYVYIGSLAGSIATIGTESQPGNPGVQWAI
RIIGFIATVAVTIYVTKVARKALEDEVLESTNDDENKQINLN

Sequences:

>Translated_282_residues
MLQPTSINLIILQSHKRTIADMPTRNWQKLIRLVFLMLLAFGVTLILATEPAFGQESAQNAPGFNPQAWLKNALQWIDGL
GAVGALAFILLYIIATVAFLPGSILTLGAGVVFGVVWGSLYVFIGATIGATAAFLVGRYLARGWVAKKIVGNQKFRAIDE
AVGREGLKIVLLTRLSPIFPFNLLNYAYGVTGVSLKDYVLASIGMIPGTIMYVYIGSLAGSIATIGTESQPGNPGVQWAI
RIIGFIATVAVTIYVTKVARKALEDEVLESTNDDENKQINLN
>Mature_282_residues
MLQPTSINLIILQSHKRTIADMPTRNWQKLIRLVFLMLLAFGVTLILATEPAFGQESAQNAPGFNPQAWLKNALQWIDGL
GAVGALAFILLYIIATVAFLPGSILTLGAGVVFGVVWGSLYVFIGATIGATAAFLVGRYLARGWVAKKIVGNQKFRAIDE
AVGREGLKIVLLTRLSPIFPFNLLNYAYGVTGVSLKDYVLASIGMIPGTIMYVYIGSLAGSIATIGTESQPGNPGVQWAI
RIIGFIATVAVTIYVTKVARKALEDEVLESTNDDENKQINLN

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Homo sapiens, GI223555958, Length=222, Percent_Identity=27.4774774774775, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI87081964, Length=138, Percent_Identity=40.5797101449275, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1788049, Length=155, Percent_Identity=32.258064516129, Blast_Score=78, Evalue=5e-16,
Organism=Drosophila melanogaster, GI21356469, Length=177, Percent_Identity=29.3785310734463, Blast_Score=78, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 30385; Mature: 30385

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQPTSINLIILQSHKRTIADMPTRNWQKLIRLVFLMLLAFGVTLILATEPAFGQESAQN
CCCCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APGFNPQAWLKNALQWIDGLGAVGALAFILLYIIATVAFLPGSILTLGAGVVFGVVWGSL
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YVFIGATIGATAAFLVGRYLARGWVAKKIVGNQKFRAIDEAVGREGLKIVLLTRLSPIFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHCCCCCC
FNLLNYAYGVTGVSLKDYVLASIGMIPGTIMYVYIGSLAGSIATIGTESQPGNPGVQWAI
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RIIGFIATVAVTIYVTKVARKALEDEVLESTNDDENKQINLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC
>Mature Secondary Structure
MLQPTSINLIILQSHKRTIADMPTRNWQKLIRLVFLMLLAFGVTLILATEPAFGQESAQN
CCCCCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
APGFNPQAWLKNALQWIDGLGAVGALAFILLYIIATVAFLPGSILTLGAGVVFGVVWGSL
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YVFIGATIGATAAFLVGRYLARGWVAKKIVGNQKFRAIDEAVGREGLKIVLLTRLSPIFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHCCCCCC
FNLLNYAYGVTGVSLKDYVLASIGMIPGTIMYVYIGSLAGSIATIGTESQPGNPGVQWAI
HHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RIIGFIATVAVTIYVTKVARKALEDEVLESTNDDENKQINLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]