| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is foxA [H]
Identifier: 17229677
GI number: 17229677
Start: 2624916
End: 2627477
Strand: Direct
Name: foxA [H]
Synonym: alr2185
Alternate gene names: 17229677
Gene position: 2624916-2627477 (Clockwise)
Preceding gene: 17229676
Following gene: 17229678
Centisome position: 40.93
GC content: 41.61
Gene sequence:
>2562_bases ATGAGTATGAAAATCGCTATTTTCCTGGCTGGGGCGTTAGCTCTGGTCGCTATTCAACCTGTCTGGGCAGAAAGTATCAA CCAGATGGAAGTGGAGGAACAAAAATCACTTACCGCCTCTGTTAAGAAAAGGCTGAGGACTGTTAAAGAGAAAGAATGGC TGGCGCAGGCAAATACAGCAGTTATCCAGGTAACTGGCGTGAAAGCCAATCCTACTGACAAAGGTGTAGAGATACTTCTA GAAACTTCCCAAGGAGAAAAACTACAAATTACAAATCGTAGTGCAGGTAATAGCTATATCACTGATATTTCTAATGCACA ACTACGTTTACCGAGTGGAGAATCCTTCACATTCCGCTCCGATAAACCAATTGCAGGTATTACTGAGATTACCGTCACAA ATCAAGATGCTAATACTATCCGAGTCAGCATAGTTGGGGAAACCATCTTACCAACTGCCGAGTTGTTTGATAGTGATGAG GGATTAATTTTTGGTCTGACATCTGTGACAGCTTCATTACCACCCCAACAGCCAGAAACTCAGTCAGAACAGCCATCACC AGCAGCAGAAGAGCCAATTGAATTGGTGGTGACAGGGGAAAAAGATGGCTATCAAGTTCCTAATACTGCAACCGTTACAC GAACGAATACGCCCATTATCGATATACCCCAGTCTATTCAAGTTGTTCCCCGTCAGGTACTCGAAGACCAACAAATTACC CGCGTTGATGATGCACTCCGCAATGTTCCTGGTGTACTTGGTAGTACCAACGCTTTTATCGGTAATCAAATCACAATTCG TGGTTTTAGCACTTCTAACCTGCCGATTTTAAGAGATGGCTTTAGGATATACGAAAACTTCTCGTTTCAAGAAACATCAA ATTTAGAGCGTATTGAAGTTTTAAAAGGCCCAGCTTCGGTGCAGTATGGTCAACTAGACCCAGGTGGGGTAATTAACCTA GTTACTAAAAAACCACTATCAGAACCGTTTTACGAAATTCAGGCTCAATTTGGTAGTTATGGACTGATAAGACCCAGTTT TGATGTTTCCGGGCCGTTGACTGACGATGGTAAATTGCTTTATCGACTGAACGCAACTTATCAACGGGAGGAAGGGTTTC GGGACTTTAATACAGAAACAGAAAGGTTTTTTATTGCCCCTAGCTTGACATGGAAGATTAGCGATCGCACTAACGTAGAC TTTTCCCTAGAATATCTCGATAGTACACGACCATTTGATACAAGTTTAGTAGCTTTTGGTAGGAGTGTGGCTGATGTTCC TTATAGTCGCGTTTTTAATGACCCTGATGACTTTATTGATACAAAATCTTTCAGTATCGCCTACAACTTAGAACATCGCT TCAGCGATAACTGGACTCTACGCAATAGTTTCCGATATCTGCAACAAGATTTATTTACCCAAGCCACCCTGGCTGGTTCC CTCAATGAAACTACAGGGATTCTCACTCGCACCTATGCCCAACGCGAGTATAAATCAGATGATTACTCACTGCAAACAAA TGTTGTCGGTAAGTTTACTACAGGTTCTATCAAACATACACTGCTAGCTGGCGTTGATTTTAATCGGGGTCTTCTCGATG ATTTAGTCTTCAGAGGTACACGAACGACATTAAATATATTCAATCCAGTTTATGGAGTCCCTCCTAGAACAGATTTTTCC ACATTACCGCCAGCTACTCCATTTAAGAACGAAACAACTAGGCTAGGATTTTATCTGCAAGACCAAATTGCATTGAATAA CCAATTTACTGTATTGGCTGGTTTACGCTACGATACTGTTGATTTTAAAGATACTTTCACAGATGAAAGTAAATACGATA GTGCCTGGAGTCCAGTAATTGGTTTGGTTTATAAACCAGTGGAAAATCTTTCTATTTACACCAGCTATTCCCGGTCATTT GTACCAAGTTTTTCCAGAGATGCTAACGGCGATTTTCTGCAACCGGAACGTGGCGCAGGATACGAAGTAGGTATCAAAGC AGAATTACTTCAAGGCAATCTTTTTGCGACATTAGCTTACTTCGATATTACCAAACAGAATGTATCCACAGCTGATCCTG ACGTTTTGGGAGCATCCGTAGCCACTGGTGAACAGCGCAGTCGTGGTATTGAACTCAGCGCAGTTGGCACAATTGCACCA GGATGGAATATTATTGCTGGCTACGCTTACACTGATGCTGAAATTAGCAAAGATAACACTATAGCTGTGGGCAATCGCTT ACCAGGAACTCCCAAACACAGTGCGAATCTTTGGACAACCTACGAAATTCAAAAGGGTAGTTTACAAGGCTTAGGTTTTG GACTTGGCGTTAATTATGTTGGTAAACGGTTCGGCAACTTTCAAAATGATTTTGAGGTGGATAGTTATTTTCTCACCAAT GCTGCTCTATTTTATCGCCAAAATAACTGGCGAGTTGGACTGAATTTCAACAACATTTTTGACATTAATTATATTAGTAG TGCTGCCACATTGACCAGAACTCGCTCTATTGAACCAGGGCAACCATTTACTGTAGTTGGCTCAATTTCGTTGGAATTTT AG
Upstream 100 bases:
>100_bases TATTAAATCCGTATAATTTTTTTTACTCACTTTTGCAAAAAATTATTAACTATCAGCTAACTAACCTGATCATGGTTGCG TAGCAAGGATGTATTGGTAA
Downstream 100 bases:
>100_bases GGCAGTGTTGATGATGCTTAAAAGCTTGAGGGTTAACCGCATATTAAAGCTTTTGTTGCTGGCTATTTTCAGCAGTTTCA TGATTATAGCCTGTGGCGAT
Product: ferrichrome-iron receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 853; Mature: 852
Protein sequence:
>853_residues MSMKIAIFLAGALALVAIQPVWAESINQMEVEEQKSLTASVKKRLRTVKEKEWLAQANTAVIQVTGVKANPTDKGVEILL ETSQGEKLQITNRSAGNSYITDISNAQLRLPSGESFTFRSDKPIAGITEITVTNQDANTIRVSIVGETILPTAELFDSDE GLIFGLTSVTASLPPQQPETQSEQPSPAAEEPIELVVTGEKDGYQVPNTATVTRTNTPIIDIPQSIQVVPRQVLEDQQIT RVDDALRNVPGVLGSTNAFIGNQITIRGFSTSNLPILRDGFRIYENFSFQETSNLERIEVLKGPASVQYGQLDPGGVINL VTKKPLSEPFYEIQAQFGSYGLIRPSFDVSGPLTDDGKLLYRLNATYQREEGFRDFNTETERFFIAPSLTWKISDRTNVD FSLEYLDSTRPFDTSLVAFGRSVADVPYSRVFNDPDDFIDTKSFSIAYNLEHRFSDNWTLRNSFRYLQQDLFTQATLAGS LNETTGILTRTYAQREYKSDDYSLQTNVVGKFTTGSIKHTLLAGVDFNRGLLDDLVFRGTRTTLNIFNPVYGVPPRTDFS TLPPATPFKNETTRLGFYLQDQIALNNQFTVLAGLRYDTVDFKDTFTDESKYDSAWSPVIGLVYKPVENLSIYTSYSRSF VPSFSRDANGDFLQPERGAGYEVGIKAELLQGNLFATLAYFDITKQNVSTADPDVLGASVATGEQRSRGIELSAVGTIAP GWNIIAGYAYTDAEISKDNTIAVGNRLPGTPKHSANLWTTYEIQKGSLQGLGFGLGVNYVGKRFGNFQNDFEVDSYFLTN AALFYRQNNWRVGLNFNNIFDINYISSAATLTRTRSIEPGQPFTVVGSISLEF
Sequences:
>Translated_853_residues MSMKIAIFLAGALALVAIQPVWAESINQMEVEEQKSLTASVKKRLRTVKEKEWLAQANTAVIQVTGVKANPTDKGVEILL ETSQGEKLQITNRSAGNSYITDISNAQLRLPSGESFTFRSDKPIAGITEITVTNQDANTIRVSIVGETILPTAELFDSDE GLIFGLTSVTASLPPQQPETQSEQPSPAAEEPIELVVTGEKDGYQVPNTATVTRTNTPIIDIPQSIQVVPRQVLEDQQIT RVDDALRNVPGVLGSTNAFIGNQITIRGFSTSNLPILRDGFRIYENFSFQETSNLERIEVLKGPASVQYGQLDPGGVINL VTKKPLSEPFYEIQAQFGSYGLIRPSFDVSGPLTDDGKLLYRLNATYQREEGFRDFNTETERFFIAPSLTWKISDRTNVD FSLEYLDSTRPFDTSLVAFGRSVADVPYSRVFNDPDDFIDTKSFSIAYNLEHRFSDNWTLRNSFRYLQQDLFTQATLAGS LNETTGILTRTYAQREYKSDDYSLQTNVVGKFTTGSIKHTLLAGVDFNRGLLDDLVFRGTRTTLNIFNPVYGVPPRTDFS TLPPATPFKNETTRLGFYLQDQIALNNQFTVLAGLRYDTVDFKDTFTDESKYDSAWSPVIGLVYKPVENLSIYTSYSRSF VPSFSRDANGDFLQPERGAGYEVGIKAELLQGNLFATLAYFDITKQNVSTADPDVLGASVATGEQRSRGIELSAVGTIAP GWNIIAGYAYTDAEISKDNTIAVGNRLPGTPKHSANLWTTYEIQKGSLQGLGFGLGVNYVGKRFGNFQNDFEVDSYFLTN AALFYRQNNWRVGLNFNNIFDINYISSAATLTRTRSIEPGQPFTVVGSISLEF >Mature_852_residues SMKIAIFLAGALALVAIQPVWAESINQMEVEEQKSLTASVKKRLRTVKEKEWLAQANTAVIQVTGVKANPTDKGVEILLE TSQGEKLQITNRSAGNSYITDISNAQLRLPSGESFTFRSDKPIAGITEITVTNQDANTIRVSIVGETILPTAELFDSDEG LIFGLTSVTASLPPQQPETQSEQPSPAAEEPIELVVTGEKDGYQVPNTATVTRTNTPIIDIPQSIQVVPRQVLEDQQITR VDDALRNVPGVLGSTNAFIGNQITIRGFSTSNLPILRDGFRIYENFSFQETSNLERIEVLKGPASVQYGQLDPGGVINLV TKKPLSEPFYEIQAQFGSYGLIRPSFDVSGPLTDDGKLLYRLNATYQREEGFRDFNTETERFFIAPSLTWKISDRTNVDF SLEYLDSTRPFDTSLVAFGRSVADVPYSRVFNDPDDFIDTKSFSIAYNLEHRFSDNWTLRNSFRYLQQDLFTQATLAGSL NETTGILTRTYAQREYKSDDYSLQTNVVGKFTTGSIKHTLLAGVDFNRGLLDDLVFRGTRTTLNIFNPVYGVPPRTDFST LPPATPFKNETTRLGFYLQDQIALNNQFTVLAGLRYDTVDFKDTFTDESKYDSAWSPVIGLVYKPVENLSIYTSYSRSFV PSFSRDANGDFLQPERGAGYEVGIKAELLQGNLFATLAYFDITKQNVSTADPDVLGASVATGEQRSRGIELSAVGTIAPG WNIIAGYAYTDAEISKDNTIAVGNRLPGTPKHSANLWTTYEIQKGSLQGLGFGLGVNYVGKRFGNFQNDFEVDSYFLTNA ALFYRQNNWRVGLNFNNIFDINYISSAATLTRTRSIEPGQPFTVVGSISLEF
Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=670, Percent_Identity=31.4925373134328, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI1787024, Length=774, Percent_Identity=25.1937984496124, Blast_Score=193, Evalue=4e-50, Organism=Escherichia coli, GI1787344, Length=699, Percent_Identity=26.3233190271817, Blast_Score=157, Evalue=3e-39, Organism=Escherichia coli, GI1788478, Length=139, Percent_Identity=32.3741007194245, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1790405, Length=264, Percent_Identity=26.1363636363636, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 94550; Mature: 94418
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMKIAIFLAGALALVAIQPVWAESINQMEVEEQKSLTASVKKRLRTVKEKEWLAQANTA CCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VIQVTGVKANPTDKGVEILLETSQGEKLQITNRSAGNSYITDISNAQLRLPSGESFTFRS EEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCEEECCCCCEEEECC DKPIAGITEITVTNQDANTIRVSIVGETILPTAELFDSDEGLIFGLTSVTASLPPQQPET CCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCEEEEEEHHHCCCCCCCCCC QSEQPSPAAEEPIELVVTGEKDGYQVPNTATVTRTNTPIIDIPQSIQVVPRQVLEDQQIT CCCCCCCCCCCCEEEEEECCCCCEECCCCEEEEECCCCEEECCHHHHHHHHHHHCCCHHH RVDDALRNVPGVLGSTNAFIGNQITIRGFSTSNLPILRDGFRIYENFSFQETSNLERIEV HHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCEEECCCEEEECCCCCCCCCCCEEEE LKGPASVQYGQLDPGGVINLVTKKPLSEPFYEIQAQFGSYGLIRPSFDVSGPLTDDGKLL ECCCCCEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCEE YRLNATYQREEGFRDFNTETERFFIAPSLTWKISDRTNVDFSLEYLDSTRPFDTSLVAFG EEECCCEECCCCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHC RSVADVPYSRVFNDPDDFIDTKSFSIAYNLEHRFSDNWTLRNSFRYLQQDLFTQATLAGS CHHHCCCHHHHCCCCHHHCCCCCEEEEEEECEECCCCCEEHHHHHHHHHHHHHHHHHCCC LNETTGILTRTYAQREYKSDDYSLQTNVVGKFTTGSIKHTLLAGVDFNRGLLDDLVFRGT CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHCCC RTTLNIFNPVYGVPPRTDFSTLPPATPFKNETTRLGFYLQDQIALNNQFTVLAGLRYDTV CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECEECCC DFKDTFTDESKYDSAWSPVIGLVYKPVENLSIYTSYSRSFVPSFSRDANGDFLQPERGAG CCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC YEVGIKAELLQGNLFATLAYFDITKQNVSTADPDVLGASVATGEQRSRGIELSAVGTIAP EEECEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCEECCCCHHHCCEEEEEEEEECC GWNIIAGYAYTDAEISKDNTIAVGNRLPGTPKHSANLWTTYEIQKGSLQGLGFGLGVNYV CCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCHHHH GKRFGNFQNDFEVDSYFLTNAALFYRQNNWRVGLNFNNIFDINYISSAATLTRTRSIEPG HHHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCEEEEEECCCHHHHHEECCCCCC QPFTVVGSISLEF CCEEEEEEEEECC >Mature Secondary Structure SMKIAIFLAGALALVAIQPVWAESINQMEVEEQKSLTASVKKRLRTVKEKEWLAQANTA CEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VIQVTGVKANPTDKGVEILLETSQGEKLQITNRSAGNSYITDISNAQLRLPSGESFTFRS EEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCEEECCCCCEEEECC DKPIAGITEITVTNQDANTIRVSIVGETILPTAELFDSDEGLIFGLTSVTASLPPQQPET CCCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCEEEEEEHHHCCCCCCCCCC QSEQPSPAAEEPIELVVTGEKDGYQVPNTATVTRTNTPIIDIPQSIQVVPRQVLEDQQIT CCCCCCCCCCCCEEEEEECCCCCEECCCCEEEEECCCCEEECCHHHHHHHHHHHCCCHHH RVDDALRNVPGVLGSTNAFIGNQITIRGFSTSNLPILRDGFRIYENFSFQETSNLERIEV HHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCEEECCCEEEECCCCCCCCCCCEEEE LKGPASVQYGQLDPGGVINLVTKKPLSEPFYEIQAQFGSYGLIRPSFDVSGPLTDDGKLL ECCCCCEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCEE YRLNATYQREEGFRDFNTETERFFIAPSLTWKISDRTNVDFSLEYLDSTRPFDTSLVAFG EEECCCEECCCCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEECCCCCCCHHHHHHC RSVADVPYSRVFNDPDDFIDTKSFSIAYNLEHRFSDNWTLRNSFRYLQQDLFTQATLAGS CHHHCCCHHHHCCCCHHHCCCCCEEEEEEECEECCCCCEEHHHHHHHHHHHHHHHHHCCC LNETTGILTRTYAQREYKSDDYSLQTNVVGKFTTGSIKHTLLAGVDFNRGLLDDLVFRGT CCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHCCC RTTLNIFNPVYGVPPRTDFSTLPPATPFKNETTRLGFYLQDQIALNNQFTVLAGLRYDTV CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEECEECCC DFKDTFTDESKYDSAWSPVIGLVYKPVENLSIYTSYSRSFVPSFSRDANGDFLQPERGAG CCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC YEVGIKAELLQGNLFATLAYFDITKQNVSTADPDVLGASVATGEQRSRGIELSAVGTIAP EEECEEEEEECCCEEEEEEEEEEECCCCCCCCCCCCCCEECCCCHHHCCEEEEEEEEECC GWNIIAGYAYTDAEISKDNTIAVGNRLPGTPKHSANLWTTYEIQKGSLQGLGFGLGVNYV CCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCHHHH GKRFGNFQNDFEVDSYFLTNAALFYRQNNWRVGLNFNNIFDINYISSAATLTRTRSIEPG HHHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCEEEEEECCCHHHHHEECCCCCC QPFTVVGSISLEF CCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 10103258; 7642488 [H]