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The map label for this gene is trg [C]

Identifier: 17229654

GI number: 17229654

Start: 2596466

End: 2598724

Strand: Reverse

Name: trg [C]

Synonym: all2162

Alternate gene names: 17229654

Gene position: 2598724-2596466 (Counterclockwise)

Preceding gene: 17229655

Following gene: 17229653

Centisome position: 40.52

GC content: 43.51

Gene sequence:

>2259_bases
ATGATTAATAAAACCGACATGGCTAAGAGTGATGATGCTCAAAATCAACCATCATTGATTTCTGCTAAACAATCCAGTAA
TGGGATTGGACGAATCTCCAATAAGCTGAGTCATCTTGTTAATCAGCAGAATTTAGGAGTTTATTACCAACGCTTAAGCT
TAAAAACAAAAGCCGTAGCTTTAGCGATCGCACTCGGTACACTCCCCATTTTAACCGTTGGTGCGATCGCCTACAACTTA
CTCAATAAATCAATTATCCAACAAACGTCTCAAGCTCAACAAACAACCGCCACTAAATTAACCGACACAGTTAACCGCTT
CATGTTGGGACGTTATGCAGATATTCAATTTATTTCCCGCCTACCATTTTTAGCAAATCCCCAAGTTAGTAGTAGAACAA
GTAAAGAAGAAAAACAACTAGTATTAGATAGTATTATCGAAATTTATCAAAATTACGAAAGTATTGCTGTATTCGATATT
CAAGGGGATGTGATTGCCCAGTCTACAGGGGAAAGTTTATATAATCAAAAAGGTCAAAGTTATTTTCAAGAAACGCTCCA
GAAAGAAGCACCCATTATTCAACAATCAGAACCATCAAGTATTGATATAACTGCACCAGTGAAAGATATTACCACAGATC
AAATTATCGCTGTGGTCAGAGCTAAGATGCCCATCAAAGCTCTAGAAGCGGTCATCAAAGACTATGCTGTTAATGGCAAT
ACATATAATTTACTCGATACCTCAGGGATAATTTTCCTCAGCCCAGAAAAAGAACTATTAGGTAAAGAAGCCAAAGCCAA
TTATCCCGATTTAGCCGCACCTCTAGATAGTAAAAAAGTTGCCAGTTTCCTTACCACTCCCAAAGTTAATAAAAAACCCG
TATTACTTAGTTATGTACCACCGCAAAACTTAGCGGGACTACCAGACCTAAACTGGCAAGTTCTCTTGACCACCGATGCA
GATGCTTTATTCCAACCACAACGACAGCTATTGTGGACAATTCTTTTGGGTACAGTATTTGCAGCTTGTGCAGTAGGAGC
GATCGCAGCTTGGTTAGCTAACCGTACCATACAACCCCTATCCAACGCGACCACCACCTTAGCAAAACTCGGTCAAGGTG
AATTCCCCAGCCGTATAGAAGTAGAAAGGGAAGACGAGTTAGGCGCATTGGCTACCAACATTAACCAAGTCGCCGAACAT
CTGCAAATTGTGGTCAAACAAAAAGGATTTGTCGTCACCAACCCTGACCAAGAATGGCAACCACAAGATGTTTTACAATT
ACAACTCCTCGAACTACTCAGCAATGTTGAAGGTGTCGCCAAAGGTGACTTAACAGTCCGTGCAGACGTGACGGCTGGCG
AAATCGGTACAGTTGCGGACTTTTTCAACTCCATAGTCGAAAACCTCCGCGATATCGTCACCCAAGTCAAACAAGCAGCT
GGTCAATTAAACACTGCTATCGGTTCCAACGAAGGTGCAATCCGTCAACTAGCAGAAGAAGCCCTCACCCAAGCCACGGA
AATCAACCGTACCCTAGACGCAGTTGATAAGATGACCCATTCCATGCAGGCCGTAGCCGACAGCGCCCAACAAGCAGCCA
CCGTAGCTAATCATGCAGCCTTTACCGCCACCAAAAGTGGACAAGCAATGGACTTGACAGTACAAAACATCTTGTCCTTA
CGCACCACCGTCGGCGAAACTGCCAAAAAAGTTAAACGCCTGGGAGAATCTTCACAACAAATTTCCCGCGTCGTCTCCAT
CATTAACCAAATCGCCACCCAAACCAACCTCCTCGCCATCAACGCAGGTATCGAAGCCGCCCGTGCTGGAGAAGAAGGCG
AAGGTTTTGGCGTAGTCGCCGAAGAAATTGGCGAACTAGCCGCTAGAAGTGCAGTCGCTACCCAAGAAATTGAGCAAATT
GTCGAGAACATTCAACGGGAAACTAACGAAGTCGTCAAGGCGATGGAAGTAGGAACTACCCAAGTAGTGGAAGGGACAAG
AATTGTGGAAGAAGCCAAACAAAGCCTGGGTCAAATATTAGATGTATCACGGCAAATCGACTCTTTAATTCAATCAATTT
CCACCGCTACTGTATCGCAAGTAGAGACATCACAAACTGTTAATAGACTCATGCAAGATATCGCCTCTGTCTCACAACGC
AGCAGCGATTCCTCCCGCCTAGTAGCCCAATCTCTCAAACAAACTGTAGAAATTTCTCATCAGTTACAAAAAACTGTGGG
TACCTTTAAAGTGAGTTAA

Upstream 100 bases:

>100_bases
AGATGCTCAAGCAATTGTCAATTCTTCTGTACTTATTGGTAATCAAAAGTATCAATAAAATATTTTCTGTTCTCATTAAT
TATTTTCCCTAACTGCAATT

Downstream 100 bases:

>100_bases
GAGTTCGTTGTTGACTGTTAACTGTTAACTAATGACAACTGACCAATGACAACTGACAACTGACCACTGACAAAAACTAT
GTCAAAAGATAAAGAATTAG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MINKTDMAKSDDAQNQPSLISAKQSSNGIGRISNKLSHLVNQQNLGVYYQRLSLKTKAVALAIALGTLPILTVGAIAYNL
LNKSIIQQTSQAQQTTATKLTDTVNRFMLGRYADIQFISRLPFLANPQVSSRTSKEEKQLVLDSIIEIYQNYESIAVFDI
QGDVIAQSTGESLYNQKGQSYFQETLQKEAPIIQQSEPSSIDITAPVKDITTDQIIAVVRAKMPIKALEAVIKDYAVNGN
TYNLLDTSGIIFLSPEKELLGKEAKANYPDLAAPLDSKKVASFLTTPKVNKKPVLLSYVPPQNLAGLPDLNWQVLLTTDA
DALFQPQRQLLWTILLGTVFAACAVGAIAAWLANRTIQPLSNATTTLAKLGQGEFPSRIEVEREDELGALATNINQVAEH
LQIVVKQKGFVVTNPDQEWQPQDVLQLQLLELLSNVEGVAKGDLTVRADVTAGEIGTVADFFNSIVENLRDIVTQVKQAA
GQLNTAIGSNEGAIRQLAEEALTQATEINRTLDAVDKMTHSMQAVADSAQQAATVANHAAFTATKSGQAMDLTVQNILSL
RTTVGETAKKVKRLGESSQQISRVVSIINQIATQTNLLAINAGIEAARAGEEGEGFGVVAEEIGELAARSAVATQEIEQI
VENIQRETNEVVKAMEVGTTQVVEGTRIVEEAKQSLGQILDVSRQIDSLIQSISTATVSQVETSQTVNRLMQDIASVSQR
SSDSSRLVAQSLKQTVEISHQLQKTVGTFKVS

Sequences:

>Translated_752_residues
MINKTDMAKSDDAQNQPSLISAKQSSNGIGRISNKLSHLVNQQNLGVYYQRLSLKTKAVALAIALGTLPILTVGAIAYNL
LNKSIIQQTSQAQQTTATKLTDTVNRFMLGRYADIQFISRLPFLANPQVSSRTSKEEKQLVLDSIIEIYQNYESIAVFDI
QGDVIAQSTGESLYNQKGQSYFQETLQKEAPIIQQSEPSSIDITAPVKDITTDQIIAVVRAKMPIKALEAVIKDYAVNGN
TYNLLDTSGIIFLSPEKELLGKEAKANYPDLAAPLDSKKVASFLTTPKVNKKPVLLSYVPPQNLAGLPDLNWQVLLTTDA
DALFQPQRQLLWTILLGTVFAACAVGAIAAWLANRTIQPLSNATTTLAKLGQGEFPSRIEVEREDELGALATNINQVAEH
LQIVVKQKGFVVTNPDQEWQPQDVLQLQLLELLSNVEGVAKGDLTVRADVTAGEIGTVADFFNSIVENLRDIVTQVKQAA
GQLNTAIGSNEGAIRQLAEEALTQATEINRTLDAVDKMTHSMQAVADSAQQAATVANHAAFTATKSGQAMDLTVQNILSL
RTTVGETAKKVKRLGESSQQISRVVSIINQIATQTNLLAINAGIEAARAGEEGEGFGVVAEEIGELAARSAVATQEIEQI
VENIQRETNEVVKAMEVGTTQVVEGTRIVEEAKQSLGQILDVSRQIDSLIQSISTATVSQVETSQTVNRLMQDIASVSQR
SSDSSRLVAQSLKQTVEISHQLQKTVGTFKVS
>Mature_752_residues
MINKTDMAKSDDAQNQPSLISAKQSSNGIGRISNKLSHLVNQQNLGVYYQRLSLKTKAVALAIALGTLPILTVGAIAYNL
LNKSIIQQTSQAQQTTATKLTDTVNRFMLGRYADIQFISRLPFLANPQVSSRTSKEEKQLVLDSIIEIYQNYESIAVFDI
QGDVIAQSTGESLYNQKGQSYFQETLQKEAPIIQQSEPSSIDITAPVKDITTDQIIAVVRAKMPIKALEAVIKDYAVNGN
TYNLLDTSGIIFLSPEKELLGKEAKANYPDLAAPLDSKKVASFLTTPKVNKKPVLLSYVPPQNLAGLPDLNWQVLLTTDA
DALFQPQRQLLWTILLGTVFAACAVGAIAAWLANRTIQPLSNATTTLAKLGQGEFPSRIEVEREDELGALATNINQVAEH
LQIVVKQKGFVVTNPDQEWQPQDVLQLQLLELLSNVEGVAKGDLTVRADVTAGEIGTVADFFNSIVENLRDIVTQVKQAA
GQLNTAIGSNEGAIRQLAEEALTQATEINRTLDAVDKMTHSMQAVADSAQQAATVANHAAFTATKSGQAMDLTVQNILSL
RTTVGETAKKVKRLGESSQQISRVVSIINQIATQTNLLAINAGIEAARAGEEGEGFGVVAEEIGELAARSAVATQEIEQI
VENIQRETNEVVKAMEVGTTQVVEGTRIVEEAKQSLGQILDVSRQIDSLIQSISTATVSQVETSQTVNRLMQDIASVSQR
SSDSSRLVAQSLKQTVEISHQLQKTVGTFKVS

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=321, Percent_Identity=29.2834890965732, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1788195, Length=278, Percent_Identity=28.7769784172662, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI2367378, Length=326, Percent_Identity=28.2208588957055, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI1788194, Length=324, Percent_Identity=26.2345679012346, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1789453, Length=338, Percent_Identity=27.2189349112426, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003018
- InterPro:   IPR003660
- InterPro:   IPR016132 [H]

Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 81383; Mature: 81383

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKTDMAKSDDAQNQPSLISAKQSSNGIGRISNKLSHLVNQQNLGVYYQRLSLKTKAVA
CCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAIALGTLPILTVGAIAYNLLNKSIIQQTSQAQQTTATKLTDTVNRFMLGRYADIQFISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LPFLANPQVSSRTSKEEKQLVLDSIIEIYQNYESIAVFDIQGDVIAQSTGESLYNQKGQS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
YFQETLQKEAPIIQQSEPSSIDITAPVKDITTDQIIAVVRAKMPIKALEAVIKDYAVNGN
HHHHHHHHCCCCCCCCCCCCEEEECCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TYNLLDTSGIIFLSPEKELLGKEAKANYPDLAAPLDSKKVASFLTTPKVNKKPVLLSYVP
EEEEEECCCEEEECCCHHHHCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECC
PQNLAGLPDLNWQVLLTTDADALFQPQRQLLWTILLGTVFAACAVGAIAAWLANRTIQPL
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SNATTTLAKLGQGEFPSRIEVEREDELGALATNINQVAEHLQIVVKQKGFVVTNPDQEWQ
HHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PQDVLQLQLLELLSNVEGVAKGDLTVRADVTAGEIGTVADFFNSIVENLRDIVTQVKQAA
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GQLNTAIGSNEGAIRQLAEEALTQATEINRTLDAVDKMTHSMQAVADSAQQAATVANHAA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTATKSGQAMDLTVQNILSLRTTVGETAKKVKRLGESSQQISRVVSIINQIATQTNLLAI
HEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEE
NAGIEAARAGEEGEGFGVVAEEIGELAARSAVATQEIEQIVENIQRETNEVVKAMEVGTT
ECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QVVEGTRIVEEAKQSLGQILDVSRQIDSLIQSISTATVSQVETSQTVNRLMQDIASVSQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SSDSSRLVAQSLKQTVEISHQLQKTVGTFKVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MINKTDMAKSDDAQNQPSLISAKQSSNGIGRISNKLSHLVNQQNLGVYYQRLSLKTKAVA
CCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LAIALGTLPILTVGAIAYNLLNKSIIQQTSQAQQTTATKLTDTVNRFMLGRYADIQFISR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LPFLANPQVSSRTSKEEKQLVLDSIIEIYQNYESIAVFDIQGDVIAQSTGESLYNQKGQS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
YFQETLQKEAPIIQQSEPSSIDITAPVKDITTDQIIAVVRAKMPIKALEAVIKDYAVNGN
HHHHHHHHCCCCCCCCCCCCEEEECCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
TYNLLDTSGIIFLSPEKELLGKEAKANYPDLAAPLDSKKVASFLTTPKVNKKPVLLSYVP
EEEEEECCCEEEECCCHHHHCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECC
PQNLAGLPDLNWQVLLTTDADALFQPQRQLLWTILLGTVFAACAVGAIAAWLANRTIQPL
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
SNATTTLAKLGQGEFPSRIEVEREDELGALATNINQVAEHLQIVVKQKGFVVTNPDQEWQ
HHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PQDVLQLQLLELLSNVEGVAKGDLTVRADVTAGEIGTVADFFNSIVENLRDIVTQVKQAA
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GQLNTAIGSNEGAIRQLAEEALTQATEINRTLDAVDKMTHSMQAVADSAQQAATVANHAA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTATKSGQAMDLTVQNILSLRTTVGETAKKVKRLGESSQQISRVVSIINQIATQTNLLAI
HEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEE
NAGIEAARAGEEGEGFGVVAEEIGELAARSAVATQEIEQIVENIQRETNEVVKAMEVGTT
ECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QVVEGTRIVEEAKQSLGQILDVSRQIDSLIQSISTATVSQVETSQTVNRLMQDIASVSQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SSDSSRLVAQSLKQTVEISHQLQKTVGTFKVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]