| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is hpuB [H]
Identifier: 17229645
GI number: 17229645
Start: 2584214
End: 2586622
Strand: Direct
Name: hpuB [H]
Synonym: alr2153
Alternate gene names: 17229645
Gene position: 2584214-2586622 (Clockwise)
Preceding gene: 17229636
Following gene: 17229646
Centisome position: 40.29
GC content: 40.39
Gene sequence:
>2409_bases GTGAAGATAGGCTTTTTATTTTTGAATATTTTCGTAATAAATCTTATTTATGTAACTGCGGTATTCGCTGCTGAAGAGCA AGATTCAGAAGCAATACCAAATATTCGTGAACTTGAATTTACCCATAGAAGTGCTGATTGGCTCACCCAAAAACCAGATA CTATTCCTGTGAATTTAGATGGGAAGAATCCCAAATGTCCTGATGGTTATGAGGTGATAGAAAATCGAGAGGATGAAAAA CAACCGGAAGTTTGCAAACGCAAGCGAGATACAAATCAGGAAGAGAACGAAGAAGCAGATATTGAGATTACGGTGACGGG AACTAGAACACCGCGATCGCTTGATGAATCCCCAGGAACAATTACAGTTATTGATGCAGAAGATATTGATAATCAACTTA TTCAGAATTTAGATGATTTAATCCGCTATGAACCGGGGGTATCGACGAGTGGAGATGCGAGACGTTATGGTTTCCAAGAC TTCAATATCCGGGGGATTGATGGGAATCGGGTTTTGCTACAAGTCGATGGGGTGCGTTTACCGGATTCCTTTGATTTTGG TAGCACCCAACTAGGAAGAAATTACATCGATACAGAAACCCTGCGACGGGTAGAAATTATTCGCGGTTCTGCCTCTACTT TGTACGGTAGTGATGCGATTGGTGGTGTCGTCACCTTCATTACCAAAGATCCCAGCGATTATTTGAACGAATCGGGAGAC GATGGGTATTTTAGCAATAAATTTGTCTACGATAGTGCCAATCGGGGAATTGGTAACACAACTACAATTGCAGGTAGATT GGGTGATGTGGAGGGATTGTTAATTTACACCAGACGGGATGGATACGAACCACAAATAAATAGCGATCGCGCTCCCAATC CCCAAACTACCGATGCAAATAGTTGGTTGACAAAATTAGTATTTAATTTGGGTGATTTTGATCAACTCAAATTAACTGGA GAGTTTATTAATCGCACCACAGACACCAATGTTTTAACCTCCCGTGGGATTAACTTTGGTGTCCGTACAGATAGCTTAAC AGCAACGGATGAAATTAAGCGTAATCGATATAATTTAAGCTACGAACATAACAATCCCGATAGCAATTTATTCTTCCAAG TTTTACGCAGCCAAATTTATTATCAAGAAGCAACCAGCACCGAAGAATCAAACGAATTACGTCGCGCAACTGCACCAATT ACAACGGGAGCAGTTAACCGTCGTCGCTTTCGTAGTTCGATTTATCAACAAAATACCTTTGGTGGAGATATTCAGCTAGA AAGTAATTTTCAAACTGGAGATATTAACCATAGACTAGTTTATGGTGCCGAACTTTCCAATACCAAAACATCCCGACTGC GCGATGGTTTTCAAGAAAATATTGCTGCACCTGGAATTATCGGCGAAAGAACCAATCGAGTGGGCCCTGATGCGTTTCCT GTCAAAGATATTGCCGACACAGATAATACGAGGTTTGGTGTTTATTTACAAAATGAAATTACCTGGGGAAATCTAACAAT TATTCCTGGTATTCGTTACGATTCATATAGTTTGAATCCCAACCCAGACGATATCTATCGCGCGAACTCGCGTAATTTTC CTACATCTAATTTTTCCGATTCTGCCATTTCACCGAGGCTGGGATTGGTTTATAGCTTCACATCAGAAGTGACTGGATTT GCTCAATATTCTCGTGGATTTCGCGCACCAACAGGCGAAGATATTAACCCCGGTTTTACCAATCCTGGTCAATATACAGT CATTCCCAATCCCGATTTAAAAGCCGAAACCAGTAATAATTTTGAATTAGGATTACGCGGTTCATTTCCCTCTGGAAAAT TTAGTATTAGCGGTTTTTACAACAACTATAATAACTTTATTGACACCTTTGGACGAGTCATTCCTACCCCTGGATTAATA GTTGGTTCTTTCCAAACAGTGAATCGCGGTGAAGTGAGAATTTATGGAGTAGAAGCCAAGGGAGAATTAAAATTAGGTTC GGGATTTAGCTTACTAGCAAGTTCTAGTTACACTGTCGGAGACGACTTAGAAGAAAATCAACCCCTCGTATCCGTCGATC CCTTCCGCTTAGTGACAGGATTAAGATATCGCGCACCCCAAAATCGCTGGGGAACTGAATTAATCGGTAGTTACGCAGCA AGTCCCAGACTTCCTAAAACTGAAGAAATACCAAATCCCTTTGTCCCTGATAGTTATTTCACATTAGACTTAATTGGGTA TTACAATTTGAGCGACAATGCAACGTTAAATATTGGGGTTTTCAATCTTCTCAATGAAAAATATTGGCGACGTGGTGACG TGCGAGGATTGAGTGCAAATGATGGGAATTTAGATTTATTTGTGCAACCAGGTATTAGTTTAGTTGCAGGTTTAACAGTG AGATTTTAA
Upstream 100 bases:
>100_bases ATGCGATCGCATAGATTAAGTGGCAAATATGGACAAATATAATTTTTGCATCCTTGCAGTCGTGATTACGGTGAATTGAC TGATTTTTGAGGTTGATCAG
Downstream 100 bases:
>100_bases AGCATCAGCAATAAAACATCAATACGAACAGTAGTTAATGTAAATAGACAATTGCTTATGAACACACAAAAAGAATCGAC AACAAAACTTGTGGGTGTAC
Product: outer membrane heme receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MKIGFLFLNIFVINLIYVTAVFAAEEQDSEAIPNIRELEFTHRSADWLTQKPDTIPVNLDGKNPKCPDGYEVIENREDEK QPEVCKRKRDTNQEENEEADIEITVTGTRTPRSLDESPGTITVIDAEDIDNQLIQNLDDLIRYEPGVSTSGDARRYGFQD FNIRGIDGNRVLLQVDGVRLPDSFDFGSTQLGRNYIDTETLRRVEIIRGSASTLYGSDAIGGVVTFITKDPSDYLNESGD DGYFSNKFVYDSANRGIGNTTTIAGRLGDVEGLLIYTRRDGYEPQINSDRAPNPQTTDANSWLTKLVFNLGDFDQLKLTG EFINRTTDTNVLTSRGINFGVRTDSLTATDEIKRNRYNLSYEHNNPDSNLFFQVLRSQIYYQEATSTEESNELRRATAPI TTGAVNRRRFRSSIYQQNTFGGDIQLESNFQTGDINHRLVYGAELSNTKTSRLRDGFQENIAAPGIIGERTNRVGPDAFP VKDIADTDNTRFGVYLQNEITWGNLTIIPGIRYDSYSLNPNPDDIYRANSRNFPTSNFSDSAISPRLGLVYSFTSEVTGF AQYSRGFRAPTGEDINPGFTNPGQYTVIPNPDLKAETSNNFELGLRGSFPSGKFSISGFYNNYNNFIDTFGRVIPTPGLI VGSFQTVNRGEVRIYGVEAKGELKLGSGFSLLASSSYTVGDDLEENQPLVSVDPFRLVTGLRYRAPQNRWGTELIGSYAA SPRLPKTEEIPNPFVPDSYFTLDLIGYYNLSDNATLNIGVFNLLNEKYWRRGDVRGLSANDGNLDLFVQPGISLVAGLTV RF
Sequences:
>Translated_802_residues MKIGFLFLNIFVINLIYVTAVFAAEEQDSEAIPNIRELEFTHRSADWLTQKPDTIPVNLDGKNPKCPDGYEVIENREDEK QPEVCKRKRDTNQEENEEADIEITVTGTRTPRSLDESPGTITVIDAEDIDNQLIQNLDDLIRYEPGVSTSGDARRYGFQD FNIRGIDGNRVLLQVDGVRLPDSFDFGSTQLGRNYIDTETLRRVEIIRGSASTLYGSDAIGGVVTFITKDPSDYLNESGD DGYFSNKFVYDSANRGIGNTTTIAGRLGDVEGLLIYTRRDGYEPQINSDRAPNPQTTDANSWLTKLVFNLGDFDQLKLTG EFINRTTDTNVLTSRGINFGVRTDSLTATDEIKRNRYNLSYEHNNPDSNLFFQVLRSQIYYQEATSTEESNELRRATAPI TTGAVNRRRFRSSIYQQNTFGGDIQLESNFQTGDINHRLVYGAELSNTKTSRLRDGFQENIAAPGIIGERTNRVGPDAFP VKDIADTDNTRFGVYLQNEITWGNLTIIPGIRYDSYSLNPNPDDIYRANSRNFPTSNFSDSAISPRLGLVYSFTSEVTGF AQYSRGFRAPTGEDINPGFTNPGQYTVIPNPDLKAETSNNFELGLRGSFPSGKFSISGFYNNYNNFIDTFGRVIPTPGLI VGSFQTVNRGEVRIYGVEAKGELKLGSGFSLLASSSYTVGDDLEENQPLVSVDPFRLVTGLRYRAPQNRWGTELIGSYAA SPRLPKTEEIPNPFVPDSYFTLDLIGYYNLSDNATLNIGVFNLLNEKYWRRGDVRGLSANDGNLDLFVQPGISLVAGLTV RF >Mature_802_residues MKIGFLFLNIFVINLIYVTAVFAAEEQDSEAIPNIRELEFTHRSADWLTQKPDTIPVNLDGKNPKCPDGYEVIENREDEK QPEVCKRKRDTNQEENEEADIEITVTGTRTPRSLDESPGTITVIDAEDIDNQLIQNLDDLIRYEPGVSTSGDARRYGFQD FNIRGIDGNRVLLQVDGVRLPDSFDFGSTQLGRNYIDTETLRRVEIIRGSASTLYGSDAIGGVVTFITKDPSDYLNESGD DGYFSNKFVYDSANRGIGNTTTIAGRLGDVEGLLIYTRRDGYEPQINSDRAPNPQTTDANSWLTKLVFNLGDFDQLKLTG EFINRTTDTNVLTSRGINFGVRTDSLTATDEIKRNRYNLSYEHNNPDSNLFFQVLRSQIYYQEATSTEESNELRRATAPI TTGAVNRRRFRSSIYQQNTFGGDIQLESNFQTGDINHRLVYGAELSNTKTSRLRDGFQENIAAPGIIGERTNRVGPDAFP VKDIADTDNTRFGVYLQNEITWGNLTIIPGIRYDSYSLNPNPDDIYRANSRNFPTSNFSDSAISPRLGLVYSFTSEVTGF AQYSRGFRAPTGEDINPGFTNPGQYTVIPNPDLKAETSNNFELGLRGSFPSGKFSISGFYNNYNNFIDTFGRVIPTPGLI VGSFQTVNRGEVRIYGVEAKGELKLGSGFSLLASSSYTVGDDLEENQPLVSVDPFRLVTGLRYRAPQNRWGTELIGSYAA SPRLPKTEEIPNPFVPDSYFTLDLIGYYNLSDNATLNIGVFNLLNEKYWRRGDVRGLSANDGNLDLFVQPGISLVAGLTV RF
Specific function: Acts as a receptor for hemoglobin or the hemoglobin/haptoglobin complex and is required for heme uptake [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=130, Percent_Identity=37.6923076923077, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1790405, Length=212, Percent_Identity=32.5471698113208, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 89574; Mature: 89574
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGFLFLNIFVINLIYVTAVFAAEEQDSEAIPNIRELEFTHRSADWLTQKPDTIPVNLD CEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCHHHCCCCCEEEEEEC GKNPKCPDGYEVIENREDEKQPEVCKRKRDTNQEENEEADIEITVTGTRTPRSLDESPGT CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCE ITVIDAEDIDNQLIQNLDDLIRYEPGVSTSGDARRYGFQDFNIRGIDGNRVLLQVDGVRL EEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEEECCCCEEEEEECCEEC PDSFDFGSTQLGRNYIDTETLRRVEIIRGSASTLYGSDAIGGVVTFITKDPSDYLNESGD CCCCCCCCHHHCCCCCCHHHHHHHHEEECCCCEECCCCCCCCEEEEEECCCHHHHCCCCC DGYFSNKFVYDSANRGIGNTTTIAGRLGDVEGLLIYTRRDGYEPQINSDRAPNPQTTDAN CCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH SWLTKLVFNLGDFDQLKLTGEFINRTTDTNVLTSRGINFGVRTDSLTATDEIKRNRYNLS HHHHHHHHCCCCCHHEEEEHHHHCCCCCCCCHHHCCCEEEEECCCCCCHHHHHCCCEEEE YEHNNPDSNLFFQVLRSQIYYQEATSTEESNELRRATAPITTGAVNRRRFRSSIYQQNTF EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC GGDIQLESNFQTGDINHRLVYGAELSNTKTSRLRDGFQENIAAPGIIGERTNRVGPDAFP CCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VKDIADTDNTRFGVYLQNEITWGNLTIIPGIRYDSYSLNPNPDDIYRANSRNFPTSNFSD CCHHCCCCCCEEEEEEECEEEECCEEEECCCEECCCCCCCCHHHHEECCCCCCCCCCCCC SAISPRLGLVYSFTSEVTGFAQYSRGFRAPTGEDINPGFTNPGQYTVIPNPDLKAETSNN CCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC FELGLRGSFPSGKFSISGFYNNYNNFIDTFGRVIPTPGLIVGSFQTVNRGEVRIYGVEAK EEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCEECCCCEEEEEEECCC GELKLGSGFSLLASSSYTVGDDLEENQPLVSVDPFRLVTGLRYRAPQNRWGTELIGSYAA CCEEECCCEEEEECCCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHC SPRLPKTEEIPNPFVPDSYFTLDLIGYYNLSDNATLNIGVFNLLNEKYWRRGDVRGLSAN CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEECCC DGNLDLFVQPGISLVAGLTVRF CCCEEEEECCCCCEEECEEECC >Mature Secondary Structure MKIGFLFLNIFVINLIYVTAVFAAEEQDSEAIPNIRELEFTHRSADWLTQKPDTIPVNLD CEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEECCCCHHHCCCCCEEEEEEC GKNPKCPDGYEVIENREDEKQPEVCKRKRDTNQEENEEADIEITVTGTRTPRSLDESPGT CCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCE ITVIDAEDIDNQLIQNLDDLIRYEPGVSTSGDARRYGFQDFNIRGIDGNRVLLQVDGVRL EEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCEEEECCCCEEEEEECCEEC PDSFDFGSTQLGRNYIDTETLRRVEIIRGSASTLYGSDAIGGVVTFITKDPSDYLNESGD CCCCCCCCHHHCCCCCCHHHHHHHHEEECCCCEECCCCCCCCEEEEEECCCHHHHCCCCC DGYFSNKFVYDSANRGIGNTTTIAGRLGDVEGLLIYTRRDGYEPQINSDRAPNPQTTDAN CCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHH SWLTKLVFNLGDFDQLKLTGEFINRTTDTNVLTSRGINFGVRTDSLTATDEIKRNRYNLS HHHHHHHHCCCCCHHEEEEHHHHCCCCCCCCHHHCCCEEEEECCCCCCHHHHHCCCEEEE YEHNNPDSNLFFQVLRSQIYYQEATSTEESNELRRATAPITTGAVNRRRFRSSIYQQNTF EECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC GGDIQLESNFQTGDINHRLVYGAELSNTKTSRLRDGFQENIAAPGIIGERTNRVGPDAFP CCEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC VKDIADTDNTRFGVYLQNEITWGNLTIIPGIRYDSYSLNPNPDDIYRANSRNFPTSNFSD CCHHCCCCCCEEEEEEECEEEECCEEEECCCEECCCCCCCCHHHHEECCCCCCCCCCCCC SAISPRLGLVYSFTSEVTGFAQYSRGFRAPTGEDINPGFTNPGQYTVIPNPDLKAETSNN CCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC FELGLRGSFPSGKFSISGFYNNYNNFIDTFGRVIPTPGLIVGSFQTVNRGEVRIYGVEAK EEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCEECCCCEEEEEEECCC GELKLGSGFSLLASSSYTVGDDLEENQPLVSVDPFRLVTGLRYRAPQNRWGTELIGSYAA CCEEECCCEEEEECCCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCCCHHHHHHHHC SPRLPKTEEIPNPFVPDSYFTLDLIGYYNLSDNATLNIGVFNLLNEKYWRRGDVRGLSAN CCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHCCCCCEECCC DGNLDLFVQPGISLVAGLTVRF CCCEEEEECCCCCEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]