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The map label for this gene is 17229626

Identifier: 17229626

GI number: 17229626

Start: 2560329

End: 2561441

Strand: Reverse

Name: 17229626

Synonym: all2134

Alternate gene names: NA

Gene position: 2561441-2560329 (Counterclockwise)

Preceding gene: 17229637

Following gene: 17229625

Centisome position: 39.94

GC content: 54.27

Gene sequence:

>1113_bases
ATGGATTTTTTTTCCTTGTTCTTAATGGACTTCGTTAAGCAGTTGCAGTCCCCAACACTTGGGTTTTTGATTGGTGGTAT
GGTCATTGCCGCTCTCGGTAGCGAATTGATAATTCCAGAGGCGATTTGTCAGATCATCGTCTTCATGTTGCTCACCAAAA
TCGGTCTGACCGGTGGTATTGCGATCCGCAATTCCAACCTGACAGAGATGGTGTTACCCGCAGCGTCTGCTGTAGCAGTA
GGGGTTCTTGTTGTATTCATCGCGCGCTATACCTTGGCCAAGCTGCCGAAGGTCAACACCGTAGATGCGATTGCGACCGG
GGGGTTGTTTGGTGCTGTGAGTGGCTCTACCATGGCTGCCGCCCTGACGCTACTGGAAGAACAAAAAATCCAATACGAGG
CATGGGCAGCCGCACTCTATCCCTTCATGGATATCCCCGCGCTCGTAACGGCGATTGTGGTGGCCAACATTTATCTCAAC
AAGAAGAAGCGTAGTGCAGCAGGCGAGTATCTCAGCAAGCAGAGTGTTGCAGCAGGCGAGTATCCCGATCAGCAGGATTA
TCCCAGCAGTCGGCAAGAGTATCTCCGCAAGCAGCAGTCTGCTGATAATCGGGTCAAAATATGGCCGATCGTCAAGGAAA
GCCTCCAGGGCCCTGCCCTATCGGCAATGTTGCTCGGCATTGCTCTTGGCCTGTTCACCCAGCCGGAAAGTGTCTATAAA
AGCTTCTACGACCCCCTCTTCCGAGGCTTGCTTTCGATCTTGATGCTGGTTATGGGTATGGAGGCTTGGTCAAGGATTGG
CGAACTACGGAAGGTAGCCCAGTGGTACGTTGTGTATAGCGTAGTGGCACCGTTGGTGCATGGGTTCATCGCCTTCGGTC
TCGGCATGATTGCCCACTACGCCACGGGATTCAGCCTGGGCGGTGTTGTGATCCTGGCCGTCATCGCCGCCTCCAGTTCA
GACATCTCAGGTCCACCCACGTTGCGAGCCGGAATTCCGTCGGCCAATCCCTCCGCCTACATCGGTGCCTCCACAGCTAT
CGGTACACCCATTGCCATTGGCTTGGCAATACCGCTCTTCCTCGGTCTCGCCCAGGCGATAGGCGGCCGCTAA

Upstream 100 bases:

>100_bases
GAAACACCTGTCGGCAGGATTGAAGCGTTGCACCCTTACTTCTTAAAGCTCACTTATCACAATAATCGCTCTTTTTTAGA
GGAGGCAGAAGGAGGTATTC

Downstream 100 bases:

>100_bases
TCTAGAGGGGTTACGGTCGCGTTCTGTCGACCCTCCCTTGACCCAGCAGACCAAGCAACTCAATATATAAGATCAATTAC
GGTAAGGAGGTAACTAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Conserved Domain Protein; Sodium Bicarbonate Cotransporter; Sodium Dependent Bicarbonate Transporter; SBT Type Permease Sodium-Bicarbonate; Membrane Permease; Domain Transmembrane Protein

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MDFFSLFLMDFVKQLQSPTLGFLIGGMVIAALGSELIIPEAICQIIVFMLLTKIGLTGGIAIRNSNLTEMVLPAASAVAV
GVLVVFIARYTLAKLPKVNTVDAIATGGLFGAVSGSTMAAALTLLEEQKIQYEAWAAALYPFMDIPALVTAIVVANIYLN
KKKRSAAGEYLSKQSVAAGEYPDQQDYPSSRQEYLRKQQSADNRVKIWPIVKESLQGPALSAMLLGIALGLFTQPESVYK
SFYDPLFRGLLSILMLVMGMEAWSRIGELRKVAQWYVVYSVVAPLVHGFIAFGLGMIAHYATGFSLGGVVILAVIAASSS
DISGPPTLRAGIPSANPSAYIGASTAIGTPIAIGLAIPLFLGLAQAIGGR

Sequences:

>Translated_370_residues
MDFFSLFLMDFVKQLQSPTLGFLIGGMVIAALGSELIIPEAICQIIVFMLLTKIGLTGGIAIRNSNLTEMVLPAASAVAV
GVLVVFIARYTLAKLPKVNTVDAIATGGLFGAVSGSTMAAALTLLEEQKIQYEAWAAALYPFMDIPALVTAIVVANIYLN
KKKRSAAGEYLSKQSVAAGEYPDQQDYPSSRQEYLRKQQSADNRVKIWPIVKESLQGPALSAMLLGIALGLFTQPESVYK
SFYDPLFRGLLSILMLVMGMEAWSRIGELRKVAQWYVVYSVVAPLVHGFIAFGLGMIAHYATGFSLGGVVILAVIAASSS
DISGPPTLRAGIPSANPSAYIGASTAIGTPIAIGLAIPLFLGLAQAIGGR
>Mature_370_residues
MDFFSLFLMDFVKQLQSPTLGFLIGGMVIAALGSELIIPEAICQIIVFMLLTKIGLTGGIAIRNSNLTEMVLPAASAVAV
GVLVVFIARYTLAKLPKVNTVDAIATGGLFGAVSGSTMAAALTLLEEQKIQYEAWAAALYPFMDIPALVTAIVVANIYLN
KKKRSAAGEYLSKQSVAAGEYPDQQDYPSSRQEYLRKQQSADNRVKIWPIVKESLQGPALSAMLLGIALGLFTQPESVYK
SFYDPLFRGLLSILMLVMGMEAWSRIGELRKVAQWYVVYSVVAPLVHGFIAFGLGMIAHYATGFSLGGVVILAVIAASSS
DISGPPTLRAGIPSANPSAYIGASTAIGTPIAIGLAIPLFLGLAQAIGGR

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39226; Mature: 39226

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFFSLFLMDFVKQLQSPTLGFLIGGMVIAALGSELIIPEAICQIIVFMLLTKIGLTGGI
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCE
AIRNSNLTEMVLPAASAVAVGVLVVFIARYTLAKLPKVNTVDAIATGGLFGAVSGSTMAA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCHHHHH
ALTLLEEQKIQYEAWAAALYPFMDIPALVTAIVVANIYLNKKKRSAAGEYLSKQSVAAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YPDQQDYPSSRQEYLRKQQSADNRVKIWPIVKESLQGPALSAMLLGIALGLFTQPESVYK
CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHH
SFYDPLFRGLLSILMLVMGMEAWSRIGELRKVAQWYVVYSVVAPLVHGFIAFGLGMIAHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGFSLGGVVILAVIAASSSDISGPPTLRAGIPSANPSAYIGASTAIGTPIAIGLAIPLF
HHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHCCCHHHHHHHHHHH
LGLAQAIGGR
HHHHHHHCCC
>Mature Secondary Structure
MDFFSLFLMDFVKQLQSPTLGFLIGGMVIAALGSELIIPEAICQIIVFMLLTKIGLTGGI
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCE
AIRNSNLTEMVLPAASAVAVGVLVVFIARYTLAKLPKVNTVDAIATGGLFGAVSGSTMAA
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCHHHHH
ALTLLEEQKIQYEAWAAALYPFMDIPALVTAIVVANIYLNKKKRSAAGEYLSKQSVAAGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YPDQQDYPSSRQEYLRKQQSADNRVKIWPIVKESLQGPALSAMLLGIALGLFTQPESVYK
CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHH
SFYDPLFRGLLSILMLVMGMEAWSRIGELRKVAQWYVVYSVVAPLVHGFIAFGLGMIAHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGFSLGGVVILAVIAASSSDISGPPTLRAGIPSANPSAYIGASTAIGTPIAIGLAIPLF
HHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHCCCHHHHHHHHHHH
LGLAQAIGGR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA