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The map label for this gene is 17229621

Identifier: 17229621

GI number: 17229621

Start: 2553022

End: 2555898

Strand: Reverse

Name: 17229621

Synonym: all2129

Alternate gene names: NA

Gene position: 2555898-2553022 (Counterclockwise)

Preceding gene: 17229625

Following gene: 17229620

Centisome position: 39.85

GC content: 43.2

Gene sequence:

>2877_bases
ATGGCAAGAGCGAGTTATGGCCCAGAGGCAAAAAAGCGATCGCGGCATTTATTACAGGTACTATTAGCTTATGCTAATGA
TGAGCTAGGCTGCGATGAAGCGGCTTTAGATGCTCTGCGTCCCCAAATACAAACTCGCTGGCAAAGTGAAACTCGCCTAG
TTGTCAGAACTAAAGTCAGATTTTTGCAGGCTTTAACGGGGTTAACATCAGATGAGTTAACATCTGAACAAATCAAAGAA
GCCTTAAAACGGTTTGCAGATTTCTTAGAAATATTAGAAGACAATCGCCCATCTCGCAGTGGTTCCGAAACTTGGCACTT
CACCCTCAATCTTTGGTACAAACACCAAGATATAGCAGCCAACTTACAAAAATTTGATTCCCACTGGGAAAGTCGCCGTC
CAGAAAAATCCAAGGAAGTCACAGCAGCAAAAGCGGATAAACAAGCAAATCCCCCCACTCCCCAGCTAAATTGGCAAGAA
CTATGCCGCGCCAACCTCAACAACCGCCTGACAACCAATCCCCTTACCAGTGCAGATGGTGTCACTTTTGAATTGAATCA
GGTTTACGTACCTTTGGGCTTAGTGCAGCGAAAACAGCGTTTACGTCGTCGTGATGATGTCACTCCCCAAGAGGGTTCGC
GTTTATATGAACCAGAGGACTTGGATATTACTCAAACCTTTGACCATAATGAATTTATTCAACAGGTACTAGGAAAAAAG
CAAAGTCAGCGAATTGCCATTGTTGGTGAACCAGGCGCAGGGAAAACTACTTTCTTGCAAAGAATTGCTGCTTGGGTGTT
AGATAATACCGCAGATTTACCAGTTTGGATTTCCCTAGCAGATTTACAAGGTAAAACGCTGGAACAGTATTTAATTCAAG
ACTGGCTACCTTCAGCTATGCGTAAACTTAGGGTTTCACCAGAACTTGAAGACGCATTTTGTGAACAGTTCAACCAAGGA
AGAGTTTGGTTACTGCTGGATGCGGTGGATGAAATGGCCATTGAATCTACCAGCGCCTTGGCGAAAATTGCTAGTTTCCT
GAAAAGCTGGGTAGGAGATGCCACAATTATTCTTACCTGTCGGCTGAATGTTTGGGATGGGGGTAAGAATGCTTTAGAAA
ACTTTGACACTTACTGCAATCTACATTTTACCTACGGCCAGGATCAAACACAGGAGTGGTTAGGGCAATTTATTTGTCGA
TGGTTTCAGTACAATCCAGCTTTAGGCGAAAAACTGCAACATGAGTTAAAGCAACCAGAAAGGCGGCGCGTCAAAGATAC
GGTAAAAAATCCCTTACGCTTGGCGTTGTTGTGTCGGATTTGGGGCATCACTCAGGGAGAATTACCTCATAGTAAGGCGA
TGCTTTATCAGCAGTTTGTGGAAGCAATTTATGAGTGGAAACAAGACATTTTCCCTACTACTTCCACTCAGCGACAGGAG
TTAAACCGAGCGTTGGGAAAATTAGCGCTGTTGGCAATCGCTCAAGAACAAACAAAGTTTCGCCTCAGACATCGTTTTGT
CTGCCAAGTTTTAGGCGCTCCCGAAGATGAACTGTTCCAACTAGCACTCCAGTTAGGTTGGTTGAATCAAGTAGGTATTT
CCGAAACTCAAGGGGAAAAAGTTTATGCTTTTTACCATCCCACATTTCAAGAATATTTTGCGGCTCAGGCTATTACAGAT
TGGAGAGTAGGAGGGGATTATCTGTTTTCAGGGGAAAGCAGTTACCGGATTTTTGAGCCGCAATGGCGAGAGGTAATACT
ATTGTGGCTGGGTAGGGATGATGTACCACAAGTAGAAAAAGAGGCGTTGATTAACGCACTGATTCAGTTTAAGGATGGCT
GCGGGGGATTCTATAATTATCAAGCTTATTTTTTGGCAGCCCAGGGAATTGCTGAATTTACCAATTGTCAACAAGCTGAG
ACGATGATTCAGCAGTTAATTAAGTGGCGTTTTGGCTACTTTGATTCACAAAAGCAAAAATGGTGCAGATATCCATCACC
CATTGTAGAAGGTGCGCGGATAGCTTTACTCAAAACAGATCGCCTAAAAGCGATCGCCTGCTTAGAGCAATTTATCACGT
CCTGTGACAATGAGTTTGATAGTTGGAATGCAGCCTATAGTTTAGGTAAGATTTTCGACCCTGGAAACAAGATTGCGATC
GCTTCTTTGGAAAATATTGTTAAAATAGCTCGGCATGAGACTATTCGTTGGCAAGCTGCCTATAGTTTAGGCAGAGTCGA
TGCAGAAAATCCCACGGCTATGACTGCATTGCTGCAAATTATCGCAACTACTCACAATGAATCTACTCGTCGTAAGGCTG
CTTATAGTTTAGGCAAACTTGATTCCCTCAACACCACAGCTATTACCACATTAGAAAAAATTGCCCAATCAGCCACAGAT
TCCTCCCAAGGCCGCCAAGCCACCGAGAATCTAGTAACTTTACGCGGTGAAGAAATTACACATAAATGGCAAGGTAAACG
ACAACAAAAACAAAAGGTACTTTACCCTGTACCTGAAAAAATCACAGCCTTAATCCGTGGTATCTCCTCGTGTGAGGATG
AAGACACCAAAAGACGTAGAGCCTACAAACTAGCACAACTTGACCCAGGTAATAAAATTGCCTTGACCACCTTACTACAA
TTGCTCAAGTCAACCCAACGCGAATCGCTACGCAAACGCACAGCAGACAATTTAAAAGAAATCCTCATTGATGCACAGTT
ACCACAAGTAATTTTCTACCTGAAAGATTGCTTTTTTCCCACAGCAAGGGAAAACGAGTTGGAATCACACCGAGATTGTT
ACAAAGTGCTGTGGTACTGTGCCGAAAATCTGACTTATCAGGAATTTTACCAGTGTTGGCTCATGAATGATTTATAG

Upstream 100 bases:

>100_bases
GGTGCAACCGGAAATGCTTGTGCAATCGAGTTTAGATGCTTAGGGGAAGTTGCTAAACTTGGGGGAATCCCCGAACTTTG
TTGAGTATGCAGCTACGATA

Downstream 100 bases:

>100_bases
TCAAATGCCCTGCGGGTAAGGATTTTCAGCAATAAATTCACCACAGCCAAAATTTTTTTTGAAAAAACTGCATAAACAAA
TAAACCCCAACCTATGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Transduction Protein With Nacht Domain Protein; NACHT Domain Family; Signal Transduction Protein; WD Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; WD40 Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat Domain Protein

Number of amino acids: Translated: 958; Mature: 957

Protein sequence:

>958_residues
MARASYGPEAKKRSRHLLQVLLAYANDELGCDEAALDALRPQIQTRWQSETRLVVRTKVRFLQALTGLTSDELTSEQIKE
ALKRFADFLEILEDNRPSRSGSETWHFTLNLWYKHQDIAANLQKFDSHWESRRPEKSKEVTAAKADKQANPPTPQLNWQE
LCRANLNNRLTTNPLTSADGVTFELNQVYVPLGLVQRKQRLRRRDDVTPQEGSRLYEPEDLDITQTFDHNEFIQQVLGKK
QSQRIAIVGEPGAGKTTFLQRIAAWVLDNTADLPVWISLADLQGKTLEQYLIQDWLPSAMRKLRVSPELEDAFCEQFNQG
RVWLLLDAVDEMAIESTSALAKIASFLKSWVGDATIILTCRLNVWDGGKNALENFDTYCNLHFTYGQDQTQEWLGQFICR
WFQYNPALGEKLQHELKQPERRRVKDTVKNPLRLALLCRIWGITQGELPHSKAMLYQQFVEAIYEWKQDIFPTTSTQRQE
LNRALGKLALLAIAQEQTKFRLRHRFVCQVLGAPEDELFQLALQLGWLNQVGISETQGEKVYAFYHPTFQEYFAAQAITD
WRVGGDYLFSGESSYRIFEPQWREVILLWLGRDDVPQVEKEALINALIQFKDGCGGFYNYQAYFLAAQGIAEFTNCQQAE
TMIQQLIKWRFGYFDSQKQKWCRYPSPIVEGARIALLKTDRLKAIACLEQFITSCDNEFDSWNAAYSLGKIFDPGNKIAI
ASLENIVKIARHETIRWQAAYSLGRVDAENPTAMTALLQIIATTHNESTRRKAAYSLGKLDSLNTTAITTLEKIAQSATD
SSQGRQATENLVTLRGEEITHKWQGKRQQKQKVLYPVPEKITALIRGISSCEDEDTKRRRAYKLAQLDPGNKIALTTLLQ
LLKSTQRESLRKRTADNLKEILIDAQLPQVIFYLKDCFFPTARENELESHRDCYKVLWYCAENLTYQEFYQCWLMNDL

Sequences:

>Translated_958_residues
MARASYGPEAKKRSRHLLQVLLAYANDELGCDEAALDALRPQIQTRWQSETRLVVRTKVRFLQALTGLTSDELTSEQIKE
ALKRFADFLEILEDNRPSRSGSETWHFTLNLWYKHQDIAANLQKFDSHWESRRPEKSKEVTAAKADKQANPPTPQLNWQE
LCRANLNNRLTTNPLTSADGVTFELNQVYVPLGLVQRKQRLRRRDDVTPQEGSRLYEPEDLDITQTFDHNEFIQQVLGKK
QSQRIAIVGEPGAGKTTFLQRIAAWVLDNTADLPVWISLADLQGKTLEQYLIQDWLPSAMRKLRVSPELEDAFCEQFNQG
RVWLLLDAVDEMAIESTSALAKIASFLKSWVGDATIILTCRLNVWDGGKNALENFDTYCNLHFTYGQDQTQEWLGQFICR
WFQYNPALGEKLQHELKQPERRRVKDTVKNPLRLALLCRIWGITQGELPHSKAMLYQQFVEAIYEWKQDIFPTTSTQRQE
LNRALGKLALLAIAQEQTKFRLRHRFVCQVLGAPEDELFQLALQLGWLNQVGISETQGEKVYAFYHPTFQEYFAAQAITD
WRVGGDYLFSGESSYRIFEPQWREVILLWLGRDDVPQVEKEALINALIQFKDGCGGFYNYQAYFLAAQGIAEFTNCQQAE
TMIQQLIKWRFGYFDSQKQKWCRYPSPIVEGARIALLKTDRLKAIACLEQFITSCDNEFDSWNAAYSLGKIFDPGNKIAI
ASLENIVKIARHETIRWQAAYSLGRVDAENPTAMTALLQIIATTHNESTRRKAAYSLGKLDSLNTTAITTLEKIAQSATD
SSQGRQATENLVTLRGEEITHKWQGKRQQKQKVLYPVPEKITALIRGISSCEDEDTKRRRAYKLAQLDPGNKIALTTLLQ
LLKSTQRESLRKRTADNLKEILIDAQLPQVIFYLKDCFFPTARENELESHRDCYKVLWYCAENLTYQEFYQCWLMNDL
>Mature_957_residues
ARASYGPEAKKRSRHLLQVLLAYANDELGCDEAALDALRPQIQTRWQSETRLVVRTKVRFLQALTGLTSDELTSEQIKEA
LKRFADFLEILEDNRPSRSGSETWHFTLNLWYKHQDIAANLQKFDSHWESRRPEKSKEVTAAKADKQANPPTPQLNWQEL
CRANLNNRLTTNPLTSADGVTFELNQVYVPLGLVQRKQRLRRRDDVTPQEGSRLYEPEDLDITQTFDHNEFIQQVLGKKQ
SQRIAIVGEPGAGKTTFLQRIAAWVLDNTADLPVWISLADLQGKTLEQYLIQDWLPSAMRKLRVSPELEDAFCEQFNQGR
VWLLLDAVDEMAIESTSALAKIASFLKSWVGDATIILTCRLNVWDGGKNALENFDTYCNLHFTYGQDQTQEWLGQFICRW
FQYNPALGEKLQHELKQPERRRVKDTVKNPLRLALLCRIWGITQGELPHSKAMLYQQFVEAIYEWKQDIFPTTSTQRQEL
NRALGKLALLAIAQEQTKFRLRHRFVCQVLGAPEDELFQLALQLGWLNQVGISETQGEKVYAFYHPTFQEYFAAQAITDW
RVGGDYLFSGESSYRIFEPQWREVILLWLGRDDVPQVEKEALINALIQFKDGCGGFYNYQAYFLAAQGIAEFTNCQQAET
MIQQLIKWRFGYFDSQKQKWCRYPSPIVEGARIALLKTDRLKAIACLEQFITSCDNEFDSWNAAYSLGKIFDPGNKIAIA
SLENIVKIARHETIRWQAAYSLGRVDAENPTAMTALLQIIATTHNESTRRKAAYSLGKLDSLNTTAITTLEKIAQSATDS
SQGRQATENLVTLRGEEITHKWQGKRQQKQKVLYPVPEKITALIRGISSCEDEDTKRRRAYKLAQLDPGNKIALTTLLQL
LKSTQRESLRKRTADNLKEILIDAQLPQVIFYLKDCFFPTARENELESHRDCYKVLWYCAENLTYQEFYQCWLMNDL

Specific function: Unknown

COG id: COG5635

COG function: function code T; Predicted NTPase (NACHT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 110349; Mature: 110217

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARASYGPEAKKRSRHLLQVLLAYANDELGCDEAALDALRPQIQTRWQSETRLVVRTKVR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FLQALTGLTSDELTSEQIKEALKRFADFLEILEDNRPSRSGSETWHFTLNLWYKHQDIAA
HHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECHHHHH
NLQKFDSHWESRRPEKSKEVTAAKADKQANPPTPQLNWQELCRANLNNRLTTNPLTSADG
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
VTFELNQVYVPLGLVQRKQRLRRRDDVTPQEGSRLYEPEDLDITQTFDHNEFIQQVLGKK
CEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCCC
QSQRIAIVGEPGAGKTTFLQRIAAWVLDNTADLPVWISLADLQGKTLEQYLIQDWLPSAM
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
RKLRVSPELEDAFCEQFNQGRVWLLLDAVDEMAIESTSALAKIASFLKSWVGDATIILTC
HHHCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
RLNVWDGGKNALENFDTYCNLHFTYGQDQTQEWLGQFICRWFQYNPALGEKLQHELKQPE
EEEECCCCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
RRRVKDTVKNPLRLALLCRIWGITQGELPHSKAMLYQQFVEAIYEWKQDIFPTTSTQRQE
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LNRALGKLALLAIAQEQTKFRLRHRFVCQVLGAPEDELFQLALQLGWLNQVGISETQGEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCCE
VYAFYHPTFQEYFAAQAITDWRVGGDYLFSGESSYRIFEPQWREVILLWLGRDDVPQVEK
EEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCEEEEEEECCCCCCHHHH
EALINALIQFKDGCGGFYNYQAYFLAAQGIAEFTNCQQAETMIQQLIKWRFGYFDSQKQK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHH
WCRYPSPIVEGARIALLKTDRLKAIACLEQFITSCDNEFDSWNAAYSLGKIFDPGNKIAI
HHCCCCCHHCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEH
ASLENIVKIARHETIRWQAAYSLGRVDAENPTAMTALLQIIATTHNESTRRKAAYSLGKL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
DSLNTTAITTLEKIAQSATDSSQGRQATENLVTLRGEEITHKWQGKRQQKQKVLYPVPEK
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCCHH
ITALIRGISSCEDEDTKRRRAYKLAQLDPGNKIALTTLLQLLKSTQRESLRKRTADNLKE
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIDAQLPQVIFYLKDCFFPTARENELESHRDCYKVLWYCAENLTYQEFYQCWLMNDL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ARASYGPEAKKRSRHLLQVLLAYANDELGCDEAALDALRPQIQTRWQSETRLVVRTKVR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FLQALTGLTSDELTSEQIKEALKRFADFLEILEDNRPSRSGSETWHFTLNLWYKHQDIAA
HHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECHHHHH
NLQKFDSHWESRRPEKSKEVTAAKADKQANPPTPQLNWQELCRANLNNRLTTNPLTSADG
HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
VTFELNQVYVPLGLVQRKQRLRRRDDVTPQEGSRLYEPEDLDITQTFDHNEFIQQVLGKK
CEEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHCCC
QSQRIAIVGEPGAGKTTFLQRIAAWVLDNTADLPVWISLADLQGKTLEQYLIQDWLPSAM
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
RKLRVSPELEDAFCEQFNQGRVWLLLDAVDEMAIESTSALAKIASFLKSWVGDATIILTC
HHHCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
RLNVWDGGKNALENFDTYCNLHFTYGQDQTQEWLGQFICRWFQYNPALGEKLQHELKQPE
EEEECCCCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
RRRVKDTVKNPLRLALLCRIWGITQGELPHSKAMLYQQFVEAIYEWKQDIFPTTSTQRQE
HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LNRALGKLALLAIAQEQTKFRLRHRFVCQVLGAPEDELFQLALQLGWLNQVGISETQGEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCCE
VYAFYHPTFQEYFAAQAITDWRVGGDYLFSGESSYRIFEPQWREVILLWLGRDDVPQVEK
EEEEECCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCEEEEEEECCCCCCHHHH
EALINALIQFKDGCGGFYNYQAYFLAAQGIAEFTNCQQAETMIQQLIKWRFGYFDSQKQK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHH
WCRYPSPIVEGARIALLKTDRLKAIACLEQFITSCDNEFDSWNAAYSLGKIFDPGNKIAI
HHCCCCCHHCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEH
ASLENIVKIARHETIRWQAAYSLGRVDAENPTAMTALLQIIATTHNESTRRKAAYSLGKL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
DSLNTTAITTLEKIAQSATDSSQGRQATENLVTLRGEEITHKWQGKRQQKQKVLYPVPEK
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCCHH
ITALIRGISSCEDEDTKRRRAYKLAQLDPGNKIALTTLLQLLKSTQRESLRKRTADNLKE
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIDAQLPQVIFYLKDCFFPTARENELESHRDCYKVLWYCAENLTYQEFYQCWLMNDL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA