| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229607
Identifier: 17229607
GI number: 17229607
Start: 2532454
End: 2533326
Strand: Reverse
Name: 17229607
Synonym: all2115
Alternate gene names: NA
Gene position: 2533326-2532454 (Counterclockwise)
Preceding gene: 17229608
Following gene: 17229605
Centisome position: 39.5
GC content: 38.95
Gene sequence:
>873_bases ATGCGCCGAGACTCTATATTTTATAAACTATTCCAACAATCTCCCAGTTTACTATTTGAACTATTGACAAATCCTCCTAT AAATGCGGAGTCTTATCGATTTGATTCGGTAGCTGTTAAAGAACCAAAATTTGAAATCGATGGGGTATTTTTACCACCAG ACAGCGAAAATCCTGGTGTTGTGTATTTCTGTGAGGTGCAGTTCCAAAAAGATGAACAGCTTTATGAAAGAGTATTTGCA GAATCCACGTTATACTTCTACCACAACCGTGCTAGATTTAGCGATTGGCAAGCGGTAATCATTTATCCATCGCGCTATAC CGAACAAAGCGATGTTTATCCCCATCGTGCATTACTGAACAGCAACCAAGTTCATCGAGTGTATTTAGATGAATTGGGTG ATATTCGCTCTTTGCCCTTATGGTTAGCATTGATGGTTTTAACTACGATAGATGAAGAACAAGCACCCTTGGAAGCTAGA TATTTATTAACAAGGAGTCAACAGCAAGCATCTCAACCATCAAACCGCGCCATAATAGAGATGATCACAACGATAATGGT GTACAAGTTTGAAAAATTAAGTAAAACAGAGGTAGAAGAAATGTTGGGAATTACACTTAAAGAAACGAGAGTTTATAGAG AGATTAAAGAAGAAGGACGGGAAGAAGGACGGGAAGAAGGGCGTGAAGAAGGAAGACAGCAAGAGGCTGTGAATCTGGTT ATTCGATTGCTAAATAAGCGGTTTGGAGAAATTTCTCAAGAAATGCGATCGCACATTTCCACTCTACCTCTACCGATTCT CGAAGATTTGAGCGAAGCTTTATTAGATTTTACAAGTTTGGCTGATTTACAAACTTGGTTAGAAGCCCTTTAA
Upstream 100 bases:
>100_bases ACTTGAGGCTTCTGTGGTGTACAAATCTGTCAAAAATTGCTCTTTTTTAAGTTTTATTAGAGACTGTTAACCATCAACGG AAAATCAGTCAAATTCTTTC
Downstream 100 bases:
>100_bases GATGAAATTGAGTTTTTAAATCCCCGACTTAGAAAAGTCGAGGATACAGCCAGATATTAACTAGCCACCAATCCCCAAAC GCCCAGCCAAAGCAGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MRRDSIFYKLFQQSPSLLFELLTNPPINAESYRFDSVAVKEPKFEIDGVFLPPDSENPGVVYFCEVQFQKDEQLYERVFA ESTLYFYHNRARFSDWQAVIIYPSRYTEQSDVYPHRALLNSNQVHRVYLDELGDIRSLPLWLALMVLTTIDEEQAPLEAR YLLTRSQQQASQPSNRAIIEMITTIMVYKFEKLSKTEVEEMLGITLKETRVYREIKEEGREEGREEGREEGRQQEAVNLV IRLLNKRFGEISQEMRSHISTLPLPILEDLSEALLDFTSLADLQTWLEAL
Sequences:
>Translated_290_residues MRRDSIFYKLFQQSPSLLFELLTNPPINAESYRFDSVAVKEPKFEIDGVFLPPDSENPGVVYFCEVQFQKDEQLYERVFA ESTLYFYHNRARFSDWQAVIIYPSRYTEQSDVYPHRALLNSNQVHRVYLDELGDIRSLPLWLALMVLTTIDEEQAPLEAR YLLTRSQQQASQPSNRAIIEMITTIMVYKFEKLSKTEVEEMLGITLKETRVYREIKEEGREEGREEGREEGRQQEAVNLV IRLLNKRFGEISQEMRSHISTLPLPILEDLSEALLDFTSLADLQTWLEAL >Mature_290_residues MRRDSIFYKLFQQSPSLLFELLTNPPINAESYRFDSVAVKEPKFEIDGVFLPPDSENPGVVYFCEVQFQKDEQLYERVFA ESTLYFYHNRARFSDWQAVIIYPSRYTEQSDVYPHRALLNSNQVHRVYLDELGDIRSLPLWLALMVLTTIDEEQAPLEAR YLLTRSQQQASQPSNRAIIEMITTIMVYKFEKLSKTEVEEMLGITLKETRVYREIKEEGREEGREEGREEGRQQEAVNLV IRLLNKRFGEISQEMRSHISTLPLPILEDLSEALLDFTSLADLQTWLEAL
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34002; Mature: 34002
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDSIFYKLFQQSPSLLFELLTNPPINAESYRFDSVAVKEPKFEIDGVFLPPDSENPGV CCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCEECCCEEEECCCEEECEEECCCCCCCCCE VYFCEVQFQKDEQLYERVFAESTLYFYHNRARFSDWQAVIIYPSRYTEQSDVYPHRALLN EEEEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHC SNQVHRVYLDELGDIRSLPLWLALMVLTTIDEEQAPLEARYLLTRSQQQASQPSNRAIIE CCCEEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH MITTIMVYKFEKLSKTEVEEMLGITLKETRVYREIKEEGREEGREEGREEGRQQEAVNLV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRLLNKRFGEISQEMRSHISTLPLPILEDLSEALLDFTSLADLQTWLEAL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRRDSIFYKLFQQSPSLLFELLTNPPINAESYRFDSVAVKEPKFEIDGVFLPPDSENPGV CCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCEECCCEEEECCCEEECEEECCCCCCCCCE VYFCEVQFQKDEQLYERVFAESTLYFYHNRARFSDWQAVIIYPSRYTEQSDVYPHRALLN EEEEEEEECCHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHC SNQVHRVYLDELGDIRSLPLWLALMVLTTIDEEQAPLEARYLLTRSQQQASQPSNRAIIE CCCEEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH MITTIMVYKFEKLSKTEVEEMLGITLKETRVYREIKEEGREEGREEGREEGRQQEAVNLV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRLLNKRFGEISQEMRSHISTLPLPILEDLSEALLDFTSLADLQTWLEAL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA