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The map label for this gene is trkA [H]

Identifier: 17229603

GI number: 17229603

Start: 2527742

End: 2528419

Strand: Direct

Name: trkA [H]

Synonym: alr2111

Alternate gene names: 17229603

Gene position: 2527742-2528419 (Clockwise)

Preceding gene: 17229598

Following gene: 17229604

Centisome position: 39.41

GC content: 44.54

Gene sequence:

>678_bases
ATGTACGTACTGATTGGTGGAGCCGGCTTAGTGGGGTTAACCCTGGCGCAAAAACTGGTGGAACTGGGGCATACTGTTGC
CATAATTGATGTTGACCATACCGCTTGCCGTTACGCTCGTGAACAAGTAGGAGCAATGGCGTTTGAAGGTAGTGCGGTGA
GTACAGAAGTATTGTTAGAAGCGGGAATCCGTAAAGCTGATGCTTTGGCGGCTGTTCTCAGAAATGATGCTTTAAATTTA
GCCATGGTAATGCTGGCTAAACACTACGGTGTTTCCCATATTCTGTCACGGATGCGCCATGCCGATTTTGCTCAACCATT
GCGTCTGGCAGGCGCTAATCATGTTATTAGTACTGTTGAACTGTCAGTTTCCACGATGGTGAATGCGATCGAGTATCCAC
AAGTAGAATCAATGATGCACTTTGAGCAAGGACAGATTGAGGTTTTAAAAATTTCTATTCCCAACAGTTGTTATGTAGCC
AATCGTAGCCTAGCTGAAATTGCTCAAGATTCTCGCTTTCCCTCAGGTTCCCTCATTATTGGCTACCAACCCCACCCCCA
CGAAGATTTGGTAATTCCTAATGGTAGTACTGTACTAGAATCGGGTTCAACTATATTAATTGCAACCAAACCAGGTTCTC
TGCATCAAGTGATTGACTTTATCGAAGGATGTAAATAG

Upstream 100 bases:

>100_bases
GTGATCTTTTCATCTCTGGTGATGAAACTTGTGTTCAGAGAACTGCCTGAGTAGTCTGTCAATTAAAGTGAAGTAAGAAG
TCTGAATATCAGGAGTAGTC

Downstream 100 bases:

>100_bases
TTTGATGAAGTTTTGCCGACATTTTTGTTTAGCGATCATATTAATGCTTCTTGTGTCTTGTGAATCAACCAAGACGACCC
TAAAGCCTTCAACAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MYVLIGGAGLVGLTLAQKLVELGHTVAIIDVDHTACRYAREQVGAMAFEGSAVSTEVLLEAGIRKADALAAVLRNDALNL
AMVMLAKHYGVSHILSRMRHADFAQPLRLAGANHVISTVELSVSTMVNAIEYPQVESMMHFEQGQIEVLKISIPNSCYVA
NRSLAEIAQDSRFPSGSLIIGYQPHPHEDLVIPNGSTVLESGSTILIATKPGSLHQVIDFIEGCK

Sequences:

>Translated_225_residues
MYVLIGGAGLVGLTLAQKLVELGHTVAIIDVDHTACRYAREQVGAMAFEGSAVSTEVLLEAGIRKADALAAVLRNDALNL
AMVMLAKHYGVSHILSRMRHADFAQPLRLAGANHVISTVELSVSTMVNAIEYPQVESMMHFEQGQIEVLKISIPNSCYVA
NRSLAEIAQDSRFPSGSLIIGYQPHPHEDLVIPNGSTVLESGSTILIATKPGSLHQVIDFIEGCK
>Mature_225_residues
MYVLIGGAGLVGLTLAQKLVELGHTVAIIDVDHTACRYAREQVGAMAFEGSAVSTEVLLEAGIRKADALAAVLRNDALNL
AMVMLAKHYGVSHILSRMRHADFAQPLRLAGANHVISTVELSVSTMVNAIEYPQVESMMHFEQGQIEVLKISIPNSCYVA
NRSLAEIAQDSRFPSGSLIIGYQPHPHEDLVIPNGSTVLESGSTILIATKPGSLHQVIDFIEGCK

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=221, Percent_Identity=24.8868778280543, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24154; Mature: 24154

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVLIGGAGLVGLTLAQKLVELGHTVAIIDVDHTACRYAREQVGAMAFEGSAVSTEVLLE
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCEEECCCCHHHHHHHH
AGIRKADALAAVLRNDALNLAMVMLAKHYGVSHILSRMRHADFAQPLRLAGANHVISTVE
HCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
LSVSTMVNAIEYPQVESMMHFEQGQIEVLKISIPNSCYVANRSLAEIAQDSRFPSGSLII
HHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCEEE
GYQPHPHEDLVIPNGSTVLESGSTILIATKPGSLHQVIDFIEGCK
CCCCCCCCCEEECCCCEEEECCCEEEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MYVLIGGAGLVGLTLAQKLVELGHTVAIIDVDHTACRYAREQVGAMAFEGSAVSTEVLLE
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCEEECCCCHHHHHHHH
AGIRKADALAAVLRNDALNLAMVMLAKHYGVSHILSRMRHADFAQPLRLAGANHVISTVE
HCCCHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
LSVSTMVNAIEYPQVESMMHFEQGQIEVLKISIPNSCYVANRSLAEIAQDSRFPSGSLII
HHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCEEE
GYQPHPHEDLVIPNGSTVLESGSTILIATKPGSLHQVIDFIEGCK
CCCCCCCCCEEECCCCEEEECCCEEEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]