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The map label for this gene is xynX [H]

Identifier: 17229582

GI number: 17229582

Start: 2497473

End: 2499281

Strand: Direct

Name: xynX [H]

Synonym: alr2090

Alternate gene names: 17229582

Gene position: 2497473-2499281 (Clockwise)

Preceding gene: 17229579

Following gene: 17229584

Centisome position: 38.94

GC content: 44.33

Gene sequence:

>1809_bases
ATGACGCAGACTTTTTACGTAAATCCGTCTACAGGCAATGATGCCAATCCTGGTAGCCAAACAGCCCCATTCAAAACGAT
TACTCAAGCCCTCAAGGTTGCCTCTCCTGATACAACTATTCAATTGGCCAACGGTAATTACAATGCTGCAAGTGGTGAAG
TTTTTCCTCTCACAATCCCCTCTAGCGTCAAAGTGGTAGGTAATGAAACCAGCAAAGGCAGCAATATTTTAATAGAAGGT
AGTGGAAACTACCTCAGCCGTACTTTTGCGGGACAAAATGTCACTTTTGTACTTCTGAATAACGCCGAACTGCGAGGCGT
AACTGTGACAAATCCGGCTAGTCGTGGCAGTGGTGCTTGGATAGAATCAACTACACCTACTGTTGCTAATTCCACCTTCA
TTAACTGCAAACGTGAGGGAGTATTTGCTACAGGTGATGCCAACCCAGTAATTACTGGTAATGTGTTTACAGAGAATGCC
GCTAATGGAATGGCGATCGCTAAAAACTCCAAAGGACAAATTCAAGGTAATATCTGCTTTAAAACTGGCTTTGGCATCGC
AGTCAGTGATACTACATCACCCACGCTGATAGATAACAAGATTTACGAGAATCGTTCAGGCATAGTTGTTTCTGGTACTG
CTCGTCCCATATTACGTAATAATCTCGTTGAAAATAATACTGATGATGGTTTGACAGTCATTGGTAATGCTCTACCGGAT
ATAGGTAATACTAGTAATCCTGGAGGCAATACCCTACGTAATAACGCCAAATTTGATTTGCAAAACGCCAGTTCTCATAA
GTTAATTTCTATAGGTAATCAACTAGACACAACTAAAGTTACAGGCAATGTAGAGTTCATAGTTAGTCAGATTCCAACAC
CAACACCAATCCCAACACCAACCCCAACACCAATCCCAACACCAACCCCAACACCAATCCCAACACCAACCCCAACACCA
ATCCCAACACCAACCCCGACACCAACCCCGACACCAACACCAACCCCGACACCAACCCCGACACCAACACCAATCCCGAC
ACCAACCCCGACACCAACACCAATCCCAACCCCAATCCCAACACCAATCCCAATCCCAACACCAATCCCAACCCCAACAC
CAATCCCAACACCAATCCCAACACCAATCCCAACCCCAACACCAATCCCGACACCAATCCCGACACCAATCCCAACACCA
ACACCAATCCCAACACCTAACCCTATAAACTTAAAAGATATTGGTAATCATTGGGCAGCACCATTTATTCGGGAGTTAGT
ACGACAAGGTATAGTGAGTGGTTTTCCTGATGGCACCTTTAAACCAGATGCGACAATGACAAGAGCGCAATATGCAGCCT
TGTTAGTCAAAGCCTTCAACCCGTCACCAAATCGGGCTGTAATTAGGTTTAAAGATTTAGCAGAAAACTTCTGGGCATTT
AAAGTAATCCAGCAGGCGTATCAAGGTCTATTTCTGGCTGGTTTTCCTGATAACACCTTCCGTCCCAACGACAACATCCA
ACGGGTACAAGTGGTAGTCTCATTAGTAAATGGACTAGGACTTGGTTTATCTGCTAACGTTACAAATACCATCAAAGCAT
TTGATGATCAAGCTAAAATTCCAGATTATGCCAAAGATGAAGTAGCGAAAGCTATAGAAAAAGGCATAATTGTTAATTAC
CCGAACATCAAACAACTCAACCCCACCCGCGACGCTACACGCGCAGAGGTAGTGGCCATAGTTTATCAAGCTTTAGTGGA
TGGCGATCGTGTAGCGGCAATTAACTCGCCTTATATCGTTAATGCCTAA

Upstream 100 bases:

>100_bases
TCTCAGGCTTATTTGGTAGTCATTGTTGCAAATTTTAGCGATCGCCACTTATTCTCAAGGTTAGCGCTAGGATGGCTGTG
TATTTTTAATCGGTATAAAT

Downstream 100 bases:

>100_bases
TTTGTAAAATAATTTTGGTGGTTGGGTTTTTAGCTGTGTTTTTCTACAGTTAAAACCCCAATCTTTATTTATGTAATTCT
CATACTCAAATCTAACCATT

Product: hypothetical protein

Products: NA

Alternate protein names: 1,4-beta-cellobiohydrolase; Exocellobiohydrolase [H]

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MTQTFYVNPSTGNDANPGSQTAPFKTITQALKVASPDTTIQLANGNYNAASGEVFPLTIPSSVKVVGNETSKGSNILIEG
SGNYLSRTFAGQNVTFVLLNNAELRGVTVTNPASRGSGAWIESTTPTVANSTFINCKREGVFATGDANPVITGNVFTENA
ANGMAIAKNSKGQIQGNICFKTGFGIAVSDTTSPTLIDNKIYENRSGIVVSGTARPILRNNLVENNTDDGLTVIGNALPD
IGNTSNPGGNTLRNNAKFDLQNASSHKLISIGNQLDTTKVTGNVEFIVSQIPTPTPIPTPTPTPIPTPTPTPIPTPTPTP
IPTPTPTPTPTPTPTPTPTPTPTPIPTPTPTPTPIPTPIPTPIPIPTPIPTPTPIPTPIPTPIPTPTPIPTPIPTPIPTP
TPIPTPNPINLKDIGNHWAAPFIRELVRQGIVSGFPDGTFKPDATMTRAQYAALLVKAFNPSPNRAVIRFKDLAENFWAF
KVIQQAYQGLFLAGFPDNTFRPNDNIQRVQVVVSLVNGLGLGLSANVTNTIKAFDDQAKIPDYAKDEVAKAIEKGIIVNY
PNIKQLNPTRDATRAEVVAIVYQALVDGDRVAAINSPYIVNA

Sequences:

>Translated_602_residues
MTQTFYVNPSTGNDANPGSQTAPFKTITQALKVASPDTTIQLANGNYNAASGEVFPLTIPSSVKVVGNETSKGSNILIEG
SGNYLSRTFAGQNVTFVLLNNAELRGVTVTNPASRGSGAWIESTTPTVANSTFINCKREGVFATGDANPVITGNVFTENA
ANGMAIAKNSKGQIQGNICFKTGFGIAVSDTTSPTLIDNKIYENRSGIVVSGTARPILRNNLVENNTDDGLTVIGNALPD
IGNTSNPGGNTLRNNAKFDLQNASSHKLISIGNQLDTTKVTGNVEFIVSQIPTPTPIPTPTPTPIPTPTPTPIPTPTPTP
IPTPTPTPTPTPTPTPTPTPTPTPIPTPTPTPTPIPTPIPTPIPIPTPIPTPTPIPTPIPTPIPTPTPIPTPIPTPIPTP
TPIPTPNPINLKDIGNHWAAPFIRELVRQGIVSGFPDGTFKPDATMTRAQYAALLVKAFNPSPNRAVIRFKDLAENFWAF
KVIQQAYQGLFLAGFPDNTFRPNDNIQRVQVVVSLVNGLGLGLSANVTNTIKAFDDQAKIPDYAKDEVAKAIEKGIIVNY
PNIKQLNPTRDATRAEVVAIVYQALVDGDRVAAINSPYIVNA
>Mature_601_residues
TQTFYVNPSTGNDANPGSQTAPFKTITQALKVASPDTTIQLANGNYNAASGEVFPLTIPSSVKVVGNETSKGSNILIEGS
GNYLSRTFAGQNVTFVLLNNAELRGVTVTNPASRGSGAWIESTTPTVANSTFINCKREGVFATGDANPVITGNVFTENAA
NGMAIAKNSKGQIQGNICFKTGFGIAVSDTTSPTLIDNKIYENRSGIVVSGTARPILRNNLVENNTDDGLTVIGNALPDI
GNTSNPGGNTLRNNAKFDLQNASSHKLISIGNQLDTTKVTGNVEFIVSQIPTPTPIPTPTPTPIPTPTPTPIPTPTPTPI
PTPTPTPTPTPTPTPTPTPTPTPIPTPTPTPTPIPTPIPTPIPIPTPIPTPTPIPTPIPTPIPTPTPIPTPIPTPIPTPT
PIPTPNPINLKDIGNHWAAPFIRELVRQGIVSGFPDGTFKPDATMTRAQYAALLVKAFNPSPNRAVIRFKDLAENFWAFK
VIQQAYQGLFLAGFPDNTFRPNDNIQRVQVVVSLVNGLGLGLSANVTNTIKAFDDQAKIPDYAKDEVAKAIEKGIIVNYP
NIKQLNPTRDATRAEVVAIVYQALVDGDRVAAINSPYIVNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 SLH (S-layer homology) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010502
- InterPro:   IPR008960
- InterPro:   IPR015922
- InterPro:   IPR003305
- InterPro:   IPR008979
- InterPro:   IPR001000
- InterPro:   IPR018087
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR001119 [H]

Pfam domain/function: PF02018 CBM_4_9; PF06452 DUF1083; PF00331 Glyco_hydro_10; PF00395 SLH [H]

EC number: =3.2.1.91 [H]

Molecular weight: Translated: 63574; Mature: 63442

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTFYVNPSTGNDANPGSQTAPFKTITQALKVASPDTTIQLANGNYNAASGEVFPLTIP
CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECC
SSVKVVGNETSKGSNILIEGSGNYLSRTFAGQNVTFVLLNNAELRGVTVTNPASRGSGAW
CCEEEEECCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCCCE
IESTTPTVANSTFINCKREGVFATGDANPVITGNVFTENAANGMAIAKNSKGQIQGNICF
EECCCCCCCCCEEEEEECCCEEEECCCCCEEECCEEECCCCCCEEEEECCCCEEEEEEEE
KTGFGIAVSDTTSPTLIDNKIYENRSGIVVSGTARPILRNNLVENNTDDGLTVIGNALPD
EECCCEEEECCCCCEEECCHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCEEEEECCCCC
IGNTSNPGGNTLRNNAKFDLQNASSHKLISIGNQLDTTKVTGNVEFIVSQIPTPTPIPTP
CCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCC
TPTPIPTPTPTPIPTPTPTPIPTPTPTPTPTPTPTPTPTPTPTPIPTPTPTPTPIPTPIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPIPIPTPIPTPTPIPTPIPTPIPTPTPIPTPIPTPIPTPTPIPTPNPINLKDIGNHWAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH
PFIRELVRQGIVSGFPDGTFKPDATMTRAQYAALLVKAFNPSPNRAVIRFKDLAENFWAF
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH
KVIQQAYQGLFLAGFPDNTFRPNDNIQRVQVVVSLVNGLGLGLSANVTNTIKAFDDQAKI
HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCC
PDYAKDEVAKAIEKGIIVNYPNIKQLNPTRDATRAEVVAIVYQALVDGDRVAAINSPYIV
CCHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEE
NA
CC
>Mature Secondary Structure 
TQTFYVNPSTGNDANPGSQTAPFKTITQALKVASPDTTIQLANGNYNAASGEVFPLTIP
CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECC
SSVKVVGNETSKGSNILIEGSGNYLSRTFAGQNVTFVLLNNAELRGVTVTNPASRGSGAW
CCEEEEECCCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCCCE
IESTTPTVANSTFINCKREGVFATGDANPVITGNVFTENAANGMAIAKNSKGQIQGNICF
EECCCCCCCCCEEEEEECCCEEEECCCCCEEECCEEECCCCCCEEEEECCCCEEEEEEEE
KTGFGIAVSDTTSPTLIDNKIYENRSGIVVSGTARPILRNNLVENNTDDGLTVIGNALPD
EECCCEEEECCCCCEEECCHHHCCCCCEEEECCCCHHHHHCCCCCCCCCCEEEEECCCCC
IGNTSNPGGNTLRNNAKFDLQNASSHKLISIGNQLDTTKVTGNVEFIVSQIPTPTPIPTP
CCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEECCCEEEEEECCCCCCCCCCC
TPTPIPTPTPTPIPTPTPTPIPTPTPTPTPTPTPTPTPTPTPTPIPTPTPTPTPIPTPIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPIPIPTPIPTPTPIPTPIPTPIPTPTPIPTPIPTPIPTPTPIPTPNPINLKDIGNHWAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH
PFIRELVRQGIVSGFPDGTFKPDATMTRAQYAALLVKAFNPSPNRAVIRFKDLAENFWAF
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHH
KVIQQAYQGLFLAGFPDNTFRPNDNIQRVQVVVSLVNGLGLGLSANVTNTIKAFDDQAKI
HHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCC
PDYAKDEVAKAIEKGIIVNYPNIKQLNPTRDATRAEVVAIVYQALVDGDRVAAINSPYIV
CCHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCEEE
NA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA