Click here to switch to the map view.

The map label for this gene is 17229531

Identifier: 17229531

GI number: 17229531

Start: 2439824

End: 2440363

Strand: Reverse

Name: 17229531

Synonym: all2039

Alternate gene names: NA

Gene position: 2440363-2439824 (Counterclockwise)

Preceding gene: 17229532

Following gene: 17229530

Centisome position: 38.05

GC content: 35.56

Gene sequence:

>540_bases
ATGAGTCACCAGATATTTTCTCTACAACCATTCCCCTCGGAGGAATCTTTAGTTGATCTCAAAATTGCTGGTAATATTAG
CCGCCATAATAATCAACTCACTATTAATTATCAGGTTGTTGGTGAATTAGCACCAGTTGAGATTCCTTCGTCTGTAGACA
TACCAACAAGAAAACATGAACTATGGCAAGATACTTGTTTTGAGTTCTTTATTGGTATTAAAGATTCTCAACAGTATTGG
GAATTCAACCTCTCTCCCTCTCGAAATTGGAATATATACCGCTTTCATGGATATCGCCAAGGAATGCAGGAAGAAACAGC
TTTTACTGCACTACCTTTTAGTATTGAAAATTACTCAGATAGTTTGGAAATGTCATTGAATGTCGATTTAGAAAGAATTA
TTTCTCCTGAACAACTTATTGATGTCGCAATTACTACAGTTATCAAACAAAAAGATGGCAAGATAACTTACTGGGCTTTA
GTTCATCCAGGTAAAGAAGCTGACTTTCACATCAGGGATAGTTTTATAATTAGGCTATGA

Upstream 100 bases:

>100_bases
ACCCAGAACATAATTTAGCCAGGGCGCTTGTGCAATTTAAACTGACAGAAAGTATCGAATCTCAAGAAGTCAAGATTCGT
AAAATTATTCAAGATATAAA

Downstream 100 bases:

>100_bases
GATGTTGTCCCAGTTGTATATAGTATTTTTAACTAAGGGAATTCGAGATAAAAAAATATCCAAAATTTAGGGTGCGTCAG
TGTGAGGAAACCTAGCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSHQIFSLQPFPSEESLVDLKIAGNISRHNNQLTINYQVVGELAPVEIPSSVDIPTRKHELWQDTCFEFFIGIKDSQQYW
EFNLSPSRNWNIYRFHGYRQGMQEETAFTALPFSIENYSDSLEMSLNVDLERIISPEQLIDVAITTVIKQKDGKITYWAL
VHPGKEADFHIRDSFIIRL

Sequences:

>Translated_179_residues
MSHQIFSLQPFPSEESLVDLKIAGNISRHNNQLTINYQVVGELAPVEIPSSVDIPTRKHELWQDTCFEFFIGIKDSQQYW
EFNLSPSRNWNIYRFHGYRQGMQEETAFTALPFSIENYSDSLEMSLNVDLERIISPEQLIDVAITTVIKQKDGKITYWAL
VHPGKEADFHIRDSFIIRL
>Mature_178_residues
SHQIFSLQPFPSEESLVDLKIAGNISRHNNQLTINYQVVGELAPVEIPSSVDIPTRKHELWQDTCFEFFIGIKDSQQYWE
FNLSPSRNWNIYRFHGYRQGMQEETAFTALPFSIENYSDSLEMSLNVDLERIISPEQLIDVAITTVIKQKDGKITYWALV
HPGKEADFHIRDSFIIRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20822; Mature: 20691

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHQIFSLQPFPSEESLVDLKIAGNISRHNNQLTINYQVVGELAPVEIPSSVDIPTRKHE
CCCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEECCEECCCCCCCCCCHHH
LWQDTCFEFFIGIKDSQQYWEFNLSPSRNWNIYRFHGYRQGMQEETAFTALPFSIENYSD
HHHHHHHHHEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEECEEECCCCC
SLEMSLNVDLERIISPEQLIDVAITTVIKQKDGKITYWALVHPGKEADFHIRDSFIIRL
CEEEEECCCHHHHCCHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
SHQIFSLQPFPSEESLVDLKIAGNISRHNNQLTINYQVVGELAPVEIPSSVDIPTRKHE
CCCEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEECCEECCCCCCCCCCHHH
LWQDTCFEFFIGIKDSQQYWEFNLSPSRNWNIYRFHGYRQGMQEETAFTALPFSIENYSD
HHHHHHHHHEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEECEEECCCCC
SLEMSLNVDLERIISPEQLIDVAITTVIKQKDGKITYWALVHPGKEADFHIRDSFIIRL
CEEEEECCCHHHHCCHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA