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The map label for this gene is lpsE [H]

Identifier: 17229529

GI number: 17229529

Start: 2435914

End: 2437014

Strand: Reverse

Name: lpsE [H]

Synonym: all2037

Alternate gene names: 17229529

Gene position: 2437014-2435914 (Counterclockwise)

Preceding gene: 17229530

Following gene: 17229527

Centisome position: 38.0

GC content: 43.32

Gene sequence:

>1101_bases
ATGCGTATACTACATATTTTGAATCACGTCCGCGAAATTGGTAATGGCATCGTGAATGTGGCTGTAGATTTAGCTTGTCT
GCAAGCCAAAAACAATCATGATGTAGCTGTAGCATCTGCTGGCGGAGAATATGAAACATTATTTGCTCAATATGGTGTTA
AACACTTTGAGTTAAACCAAAGTCGGACACCCCTAAATTTAATTAATGCGGCTAGGCGTTATCGCGCAATTATCCGAGAA
TTTCAACCGGATATTGTCCATGCTCACATGATGACGGGAGTTGTGCTGGGAAGATGTCTTAAAGCTGATTCTGAATATGC
TTTGGTGGCTACAGTACACAATGAATTTCAACGCAGTGCTGTACTCATGGGATTAGCAGATAGAGTAATTGCGGTGAGTC
ATGCTGTTGCTAAATCAATGGCTAGGCGTGGTATTCCTGAGCATAAATTGCGAGTAGTACCCAATGGGACATTAGGCAGC
GTCCGTACTCGTAATATTAAAGAGTACTCACCAGTAGAATTACAACGACCAGCGATCGCCACTGTAGCCGGGATGTATCA
GCGTAAAGGCATTGGTGAGTTAATCGCTGCTTTTGCACAGATTGCCCAAGATTTCCCCCAAGTTCATCTTTATCTAGTTG
GAGACGGCCCGGAAAGGCAGATTTTTGAGGAAAAAGCCCAAGCTACAGGTTTGAGCAATACACGCATTCATTTTGAAGGC
TTCCAACCAGAACCACAACGCTACTTATTAGCCGCAGATATATTTGTACTTGCTTCTCACCGTGATCCTTCTCCCCTGGT
AATTCCAGAAGCCCGTGAAGCCGGCTGTGCGATCGTCGCTACCAGCGTAGATGGCATTCCAGAAGCATTAGACAATGGCA
AAGCTGGTGTTTTAGTTCCCCCAAAAGATAGCTCTGCTTTGGCAGATGCCCTAGCAAAATTACTTAGTCAACCTCATCTG
CTCAAACATTGGCAAGATCAAGCACAACAAAATTTAGAATTACTGACGGTTGGGCGTGTGAATCAACAAACTTTAGCAGT
TTATGCTGAGGTTAAAATAGAAGTTAGAAACGTAATTTGTCATACCCTAAAAAAAAGCTAG

Upstream 100 bases:

>100_bases
ATCCCCGACTTCTTCAAGAAGTCGGGGATCTAAAAGAACTTCCGGATCATTGTCACAAACTAAAGATTTCTTTTGTGGAA
CTAGAATAAAAATTATTTTT

Downstream 100 bases:

>100_bases
TATGTTTTGCGGGGTCGTCAGATACTCCCGGTGGGTGGCTGATTTATGTTGCTCTGTAACAGTTTCAGCACCCCTAACCT
CTACTCTTTTTCTCTATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRILHILNHVREIGNGIVNVAVDLACLQAKNNHDVAVASAGGEYETLFAQYGVKHFELNQSRTPLNLINAARRYRAIIRE
FQPDIVHAHMMTGVVLGRCLKADSEYALVATVHNEFQRSAVLMGLADRVIAVSHAVAKSMARRGIPEHKLRVVPNGTLGS
VRTRNIKEYSPVELQRPAIATVAGMYQRKGIGELIAAFAQIAQDFPQVHLYLVGDGPERQIFEEKAQATGLSNTRIHFEG
FQPEPQRYLLAADIFVLASHRDPSPLVIPEAREAGCAIVATSVDGIPEALDNGKAGVLVPPKDSSALADALAKLLSQPHL
LKHWQDQAQQNLELLTVGRVNQQTLAVYAEVKIEVRNVICHTLKKS

Sequences:

>Translated_366_residues
MRILHILNHVREIGNGIVNVAVDLACLQAKNNHDVAVASAGGEYETLFAQYGVKHFELNQSRTPLNLINAARRYRAIIRE
FQPDIVHAHMMTGVVLGRCLKADSEYALVATVHNEFQRSAVLMGLADRVIAVSHAVAKSMARRGIPEHKLRVVPNGTLGS
VRTRNIKEYSPVELQRPAIATVAGMYQRKGIGELIAAFAQIAQDFPQVHLYLVGDGPERQIFEEKAQATGLSNTRIHFEG
FQPEPQRYLLAADIFVLASHRDPSPLVIPEAREAGCAIVATSVDGIPEALDNGKAGVLVPPKDSSALADALAKLLSQPHL
LKHWQDQAQQNLELLTVGRVNQQTLAVYAEVKIEVRNVICHTLKKS
>Mature_366_residues
MRILHILNHVREIGNGIVNVAVDLACLQAKNNHDVAVASAGGEYETLFAQYGVKHFELNQSRTPLNLINAARRYRAIIRE
FQPDIVHAHMMTGVVLGRCLKADSEYALVATVHNEFQRSAVLMGLADRVIAVSHAVAKSMARRGIPEHKLRVVPNGTLGS
VRTRNIKEYSPVELQRPAIATVAGMYQRKGIGELIAAFAQIAQDFPQVHLYLVGDGPERQIFEEKAQATGLSNTRIHFEG
FQPEPQRYLLAADIFVLASHRDPSPLVIPEAREAGCAIVATSVDGIPEALDNGKAGVLVPPKDSSALADALAKLLSQPHL
LKHWQDQAQQNLELLTVGRVNQQTLAVYAEVKIEVRNVICHTLKKS

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Drosophila melanogaster, GI24654571, Length=253, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40170; Mature: 40170

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILHILNHVREIGNGIVNVAVDLACLQAKNNHDVAVASAGGEYETLFAQYGVKHFELNQ
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCEEEECCC
SRTPLNLINAARRYRAIIREFQPDIVHAHMMTGVVLGRCLKADSEYALVATVHNEFQRSA
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
VLMGLADRVIAVSHAVAKSMARRGIPEHKLRVVPNGTLGSVRTRNIKEYSPVELQRPAIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
TVAGMYQRKGIGELIAAFAQIAQDFPQVHLYLVGDGPERQIFEEKAQATGLSNTRIHFEG
HHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEC
FQPEPQRYLLAADIFVLASHRDPSPLVIPEAREAGCAIVATSVDGIPEALDNGKAGVLVP
CCCCCHHEEEEEEEEEEECCCCCCCEECCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEC
PKDSSALADALAKLLSQPHLLKHWQDQAQQNLELLTVGRVNQQTLAVYAEVKIEVRNVIC
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCHHEEEEEEHHHHHHHHHH
HTLKKS
HHHCCC
>Mature Secondary Structure
MRILHILNHVREIGNGIVNVAVDLACLQAKNNHDVAVASAGGEYETLFAQYGVKHFELNQ
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCEEEECCC
SRTPLNLINAARRYRAIIREFQPDIVHAHMMTGVVLGRCLKADSEYALVATVHNEFQRSA
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH
VLMGLADRVIAVSHAVAKSMARRGIPEHKLRVVPNGTLGSVRTRNIKEYSPVELQRPAIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
TVAGMYQRKGIGELIAAFAQIAQDFPQVHLYLVGDGPERQIFEEKAQATGLSNTRIHFEG
HHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEC
FQPEPQRYLLAADIFVLASHRDPSPLVIPEAREAGCAIVATSVDGIPEALDNGKAGVLVP
CCCCCHHEEEEEEEEEEECCCCCCCEECCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEC
PKDSSALADALAKLLSQPHLLKHWQDQAQQNLELLTVGRVNQQTLAVYAEVKIEVRNVIC
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCCCHHEEEEEEHHHHHHHHHH
HTLKKS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]