| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229479
Identifier: 17229479
GI number: 17229479
Start: 2382281
End: 2382790
Strand: Reverse
Name: 17229479
Synonym: all1987
Alternate gene names: NA
Gene position: 2382790-2382281 (Counterclockwise)
Preceding gene: 17229480
Following gene: 17229478
Centisome position: 37.15
GC content: 37.25
Gene sequence:
>510_bases ATGCTTAGACACAAATTGCCATTATTACTAACCATAACTCTTAGTACCATTCCCATTTTGCCGATTCCATTATCGCTGGC GCAAACCACATCTATACCTCTACCTTCAGACGCACCTTTGGATCTAGATTTACTAACCCAACCAAAGGACTCTGTAATTA CAGCTAATACAATTAACCTATCAGGATTAACCACTCCGAGCTTATGGTGGTCAAAAGAAAACTCTGAAAACAAGCTGCTA GATAATTGGATAGCATATCCAGCTACTGAAAATGAAGTTGGACGAGTAGATTTAATTGTCAATCAGCAAATTTGGAGCTT GTTAGACTATTTAGAACGTTATGATTTTGTAAATCGCCTGGGCAGTACTGCAAGAAGAGACGGTTACAATGTCCGAGTAT TTAATTATCAAAAAGACCTACTAGGTTCTTATACCTGTAGCTATAATCCTATTTCTGCGAACTGTAATATTCAGTTGAAT ACTCAATACAAGTTACGTCGCTATCAATAG
Upstream 100 bases:
>100_bases AATCCGTATAGTCGCTATCAAAGCTCAATAATAGCTAGTCATCAACAAATATACATTACTCTCTCTAGAGCATATAGTCT CCAGCCACGTAATTTCAGTT
Downstream 100 bases:
>100_bases CAAATCACAATAATACCAAACAAAAACCCCCTTTTTTTAAAAAAAAGGGGGTTTTTGGTAGATTAAAGAACCTGGCACCG AGCGATTGTGGCATAGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLRHKLPLLLTITLSTIPILPIPLSLAQTTSIPLPSDAPLDLDLLTQPKDSVITANTINLSGLTTPSLWWSKENSENKLL DNWIAYPATENEVGRVDLIVNQQIWSLLDYLERYDFVNRLGSTARRDGYNVRVFNYQKDLLGSYTCSYNPISANCNIQLN TQYKLRRYQ
Sequences:
>Translated_169_residues MLRHKLPLLLTITLSTIPILPIPLSLAQTTSIPLPSDAPLDLDLLTQPKDSVITANTINLSGLTTPSLWWSKENSENKLL DNWIAYPATENEVGRVDLIVNQQIWSLLDYLERYDFVNRLGSTARRDGYNVRVFNYQKDLLGSYTCSYNPISANCNIQLN TQYKLRRYQ >Mature_169_residues MLRHKLPLLLTITLSTIPILPIPLSLAQTTSIPLPSDAPLDLDLLTQPKDSVITANTINLSGLTTPSLWWSKENSENKLL DNWIAYPATENEVGRVDLIVNQQIWSLLDYLERYDFVNRLGSTARRDGYNVRVFNYQKDLLGSYTCSYNPISANCNIQLN TQYKLRRYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19300; Mature: 19300
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHKLPLLLTITLSTIPILPIPLSLAQTTSIPLPSDAPLDLDLLTQPKDSVITANTINL CCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEE SGLTTPSLWWSKENSENKLLDNWIAYPATENEVGRVDLIVNQQIWSLLDYLERYDFVNRL CCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH GSTARRDGYNVRVFNYQKDLLGSYTCSYNPISANCNIQLNTQYKLRRYQ CCHHHCCCCEEEEEEECHHHCCCEECCCCCCCCCCEEEECCCEEEEECC >Mature Secondary Structure MLRHKLPLLLTITLSTIPILPIPLSLAQTTSIPLPSDAPLDLDLLTQPKDSVITANTINL CCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEE SGLTTPSLWWSKENSENKLLDNWIAYPATENEVGRVDLIVNQQIWSLLDYLERYDFVNRL CCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH GSTARRDGYNVRVFNYQKDLLGSYTCSYNPISANCNIQLNTQYKLRRYQ CCHHHCCCCEEEEEEECHHHCCCEECCCCCCCCCCEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA