| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229473
Identifier: 17229473
GI number: 17229473
Start: 2368425
End: 2369402
Strand: Reverse
Name: 17229473
Synonym: all1981
Alternate gene names: NA
Gene position: 2369402-2368425 (Counterclockwise)
Preceding gene: 17229475
Following gene: 17229472
Centisome position: 36.94
GC content: 35.79
Gene sequence:
>978_bases ATGAGTAATATTTTTTGTTCAGACTACACAAGGAAAGTAGAGGAAGATATCATTGGTAGTGGTACTGATTACCAAACATA TATTCTTGTTGAGTGTCCTCAACCCTGGCTAAAAAATGCTTTCAGTTCGAGATGGGTTCCGAATAATTTACAGATGCTGG TAGAAGAAGTATACAAAGCTAAACTACCAATTAGGTTTCTTTTAATTGCTAATGATCTTACCCATAAAGCAGATCATACA ACCCTCTTAATTTATCAAAAACAAGAAGGCTTAAGTCGTGGATATTTCAAGCATGAATTTAAATTAACGCACATTGAGCA AGTAGCTGGTATTGTCAAAAAATGGTTATGGGGTAAGCGACCAGAGTCTGATATAGAAACAAATATAACGAGAGATATTT TAGTTTGTACACACGGTAGTTATGATAAGTGTTGTGCTAGATATGGTAATTCTTTTTATTTCCATGCTAACGCTACTATC TCCAATTTGAAGTTAGAAAATGTCCGAATTTGGCAATCAACTCACATTGGTGGTCATAGATTCGCACCCACAGCAATAGA CTTACCGGAAGGGAGATATTATGGGCTTTTAGATCAGGATTCTTTTCTATCAATCTTGACACGTACTGGCGATATTCAAA GTCTAAAAAAAGTATATCGAGGTTGGGGAATTTTACCACCAGTTATTCAAGTTCTAGAAAGAGATTTAATGTTGAGTCAT GGATGGAGTTGGTTTAATTACAGAGTTTCAGCCAAGATTTTAGAGCAAAGTTTGGACAACAATACTATGGTGGGTGAATT AACTTTTGAGCAAGGCTCTAGCTCTTTGTATACATATCGAGCTAAATTGATCAAAGATATAGATAGGACTATCAGTGTGA AGAGTTCTTGTAGTGCTAACCAAACTTCAACGATTGTCAAATACGCTGTAGCCGATCTTGGGTTAGTTACGGAAAATGTC CTAACTCTTAGTAAGTAG
Upstream 100 bases:
>100_bases AGGATTAGTTTTGACTTTTTGAAATGGGAATTTTGTAATGTGGAAAACAATACTGTTTTTCATTAATTCGTCAACAAGAA AAATAAATTAGTATAGAAAA
Downstream 100 bases:
>100_bases AAATCATAATTTATATTATATCAGAGGATTTATCTACTGAGAGCGATCGCTACACACATCGTCTTATGAGCCTATTGGCG TGGCAAAGCTAAAATATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Sucraseferredoxin-Like; Sucraseferredoxin-Like Protein; Sucrase/Ferredoxin-Like Protein; Sucrase/Ferredoxin-Like Family
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSNIFCSDYTRKVEEDIIGSGTDYQTYILVECPQPWLKNAFSSRWVPNNLQMLVEEVYKAKLPIRFLLIANDLTHKADHT TLLIYQKQEGLSRGYFKHEFKLTHIEQVAGIVKKWLWGKRPESDIETNITRDILVCTHGSYDKCCARYGNSFYFHANATI SNLKLENVRIWQSTHIGGHRFAPTAIDLPEGRYYGLLDQDSFLSILTRTGDIQSLKKVYRGWGILPPVIQVLERDLMLSH GWSWFNYRVSAKILEQSLDNNTMVGELTFEQGSSSLYTYRAKLIKDIDRTISVKSSCSANQTSTIVKYAVADLGLVTENV LTLSK
Sequences:
>Translated_325_residues MSNIFCSDYTRKVEEDIIGSGTDYQTYILVECPQPWLKNAFSSRWVPNNLQMLVEEVYKAKLPIRFLLIANDLTHKADHT TLLIYQKQEGLSRGYFKHEFKLTHIEQVAGIVKKWLWGKRPESDIETNITRDILVCTHGSYDKCCARYGNSFYFHANATI SNLKLENVRIWQSTHIGGHRFAPTAIDLPEGRYYGLLDQDSFLSILTRTGDIQSLKKVYRGWGILPPVIQVLERDLMLSH GWSWFNYRVSAKILEQSLDNNTMVGELTFEQGSSSLYTYRAKLIKDIDRTISVKSSCSANQTSTIVKYAVADLGLVTENV LTLSK >Mature_324_residues SNIFCSDYTRKVEEDIIGSGTDYQTYILVECPQPWLKNAFSSRWVPNNLQMLVEEVYKAKLPIRFLLIANDLTHKADHTT LLIYQKQEGLSRGYFKHEFKLTHIEQVAGIVKKWLWGKRPESDIETNITRDILVCTHGSYDKCCARYGNSFYFHANATIS NLKLENVRIWQSTHIGGHRFAPTAIDLPEGRYYGLLDQDSFLSILTRTGDIQSLKKVYRGWGILPPVIQVLERDLMLSHG WSWFNYRVSAKILEQSLDNNTMVGELTFEQGSSSLYTYRAKLIKDIDRTISVKSSCSANQTSTIVKYAVADLGLVTENVL TLSK
Specific function: Unknown
COG id: COG4759
COG function: function code O; Uncharacterized protein conserved in bacteria containing thioredoxin-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37209; Mature: 37078
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIFCSDYTRKVEEDIIGSGTDYQTYILVECPQPWLKNAFSSRWVPNNLQMLVEEVYKA CCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHH KLPIRFLLIANDLTHKADHTTLLIYQKQEGLSRGYFKHEFKLTHIEQVAGIVKKWLWGKR CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEHEEEHHHHHHHHHHHHHHHCCCC PESDIETNITRDILVCTHGSYDKCCARYGNSFYFHANATISNLKLENVRIWQSTHIGGHR CCCCHHHCCCEEEEEEECCCHHHHHHHHCCEEEEEECCEEEEEEEEEEEEEEECCCCCCC FAPTAIDLPEGRYYGLLDQDSFLSILTRTGDIQSLKKVYRGWGILPPVIQVLERDLMLSH CCCCEEECCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GWSWFNYRVSAKILEQSLDNNTMVGELTFEQGSSSLYTYRAKLIKDIDRTISVKSSCSAN CCCEEEEEHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCC QTSTIVKYAVADLGLVTENVLTLSK CHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNIFCSDYTRKVEEDIIGSGTDYQTYILVECPQPWLKNAFSSRWVPNNLQMLVEEVYKA CCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHH KLPIRFLLIANDLTHKADHTTLLIYQKQEGLSRGYFKHEFKLTHIEQVAGIVKKWLWGKR CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEHEEEHHHHHHHHHHHHHHHCCCC PESDIETNITRDILVCTHGSYDKCCARYGNSFYFHANATISNLKLENVRIWQSTHIGGHR CCCCHHHCCCEEEEEEECCCHHHHHHHHCCEEEEEECCEEEEEEEEEEEEEEECCCCCCC FAPTAIDLPEGRYYGLLDQDSFLSILTRTGDIQSLKKVYRGWGILPPVIQVLERDLMLSH CCCCEEECCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GWSWFNYRVSAKILEQSLDNNTMVGELTFEQGSSSLYTYRAKLIKDIDRTISVKSSCSAN CCCEEEEEHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCC QTSTIVKYAVADLGLVTENVLTLSK CHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA