| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229465
Identifier: 17229465
GI number: 17229465
Start: 2357350
End: 2358189
Strand: Reverse
Name: 17229465
Synonym: all1973
Alternate gene names: NA
Gene position: 2358189-2357350 (Counterclockwise)
Preceding gene: 17229466
Following gene: 17229464
Centisome position: 36.77
GC content: 39.4
Gene sequence:
>840_bases GTGCAGGAGTTGACAATGCCTAAAAAATCTGATTCAAATTCCCTTTTACTGGCGCGAATGACGCTTCGGGAAGATGCTTT AAAAAATTTGCAAATTGCGATACTTCAGTTTCCATTTGCCGAAATTATTGCGGAATTTCGTAACAGCATGGAAGAGGTTT TATCCCCAAATCGCAAAAAAAAGGTTCATGTACCTTACAGACAGTTGAATAATGGTTTAGTTGCCTGTGCATCAACTTTA ACTCATGGTTTTGAGTATTTTGATAGAGGTGATTATCGAGCTTTAGCTGTAGGCACAAATGAAAATCCCCTTCGAGTTCC CACACCAGAACAAATACATGAGTTAGTGAGTATTTGGGCGCAGGAATGGACAAAGCAATTTTCTGGTAAGGGAAAAACAG ATCAGGTCGCTAGTGTTTGCGATCGCTTCCTAGAAAAAATAGACATATTTCCCTCTAATTGGTTTTGGCAATCAATACCA ACAGAAACCCTGATCCAAAATATTAACGCCGAAAAAGGACTTGGATTTCAAGCTATACCCAGCCTACTTGCAACTATATT GCATGGAAAAGCCTGTGTTATTCGCTCTGGACAAAGAGAGCAAGAAATTCGCTGGAGAAAAGCACAAGGCGATGGTTCAG GAAGAACGGGACTATTCCTAGTTAGTCAACCATTTGTTGCCTTTTACCTAGATGAGAACGGCAAGGAAAGGACAGGATAT TTTGTCTATCGCTTAGATTTTCGCTTACAAACTCAAGCAGGAAGGTTTAATGAAATTAGTCAGATCAAACCTTGGATTTT CTTACATTTAAGTTGCCAGAGATATAGGAATCCTATTTGA
Upstream 100 bases:
>100_bases GCGACTATGCCAGCGAGGAAAACAGCGTGGGCAATGCACTTTATCAGCCTCTTGCTGAGGCGATGGAAACAATTAATGAC CTATATTTTTAGCTTTTTGC
Downstream 100 bases:
>100_bases TTTGTGAACAAGACCAAGAGATAATACGGAGAGGGATAAAAGTCTAATAGTAAACAATGAAAAGTCAGCATTTACAAGCT ACTACACTTGCGGGGGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MQELTMPKKSDSNSLLLARMTLREDALKNLQIAILQFPFAEIIAEFRNSMEEVLSPNRKKKVHVPYRQLNNGLVACASTL THGFEYFDRGDYRALAVGTNENPLRVPTPEQIHELVSIWAQEWTKQFSGKGKTDQVASVCDRFLEKIDIFPSNWFWQSIP TETLIQNINAEKGLGFQAIPSLLATILHGKACVIRSGQREQEIRWRKAQGDGSGRTGLFLVSQPFVAFYLDENGKERTGY FVYRLDFRLQTQAGRFNEISQIKPWIFLHLSCQRYRNPI
Sequences:
>Translated_279_residues MQELTMPKKSDSNSLLLARMTLREDALKNLQIAILQFPFAEIIAEFRNSMEEVLSPNRKKKVHVPYRQLNNGLVACASTL THGFEYFDRGDYRALAVGTNENPLRVPTPEQIHELVSIWAQEWTKQFSGKGKTDQVASVCDRFLEKIDIFPSNWFWQSIP TETLIQNINAEKGLGFQAIPSLLATILHGKACVIRSGQREQEIRWRKAQGDGSGRTGLFLVSQPFVAFYLDENGKERTGY FVYRLDFRLQTQAGRFNEISQIKPWIFLHLSCQRYRNPI >Mature_279_residues MQELTMPKKSDSNSLLLARMTLREDALKNLQIAILQFPFAEIIAEFRNSMEEVLSPNRKKKVHVPYRQLNNGLVACASTL THGFEYFDRGDYRALAVGTNENPLRVPTPEQIHELVSIWAQEWTKQFSGKGKTDQVASVCDRFLEKIDIFPSNWFWQSIP TETLIQNINAEKGLGFQAIPSLLATILHGKACVIRSGQREQEIRWRKAQGDGSGRTGLFLVSQPFVAFYLDENGKERTGY FVYRLDFRLQTQAGRFNEISQIKPWIFLHLSCQRYRNPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32100; Mature: 32100
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELTMPKKSDSNSLLLARMTLREDALKNLQIAILQFPFAEIIAEFRNSMEEVLSPNRKK CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCC KVHVPYRQLNNGLVACASTLTHGFEYFDRGDYRALAVGTNENPLRVPTPEQIHELVSIWA EEECCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH QEWTKQFSGKGKTDQVASVCDRFLEKIDIFPSNWFWQSIPTETLIQNINAEKGLGFQAIP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHH SLLATILHGKACVIRSGQREQEIRWRKAQGDGSGRTGLFLVSQPFVAFYLDENGKERTGY HHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCE FVYRLDFRLQTQAGRFNEISQIKPWIFLHLSCQRYRNPI EEEEEEEEEECCCCCCCCHHHCCCEEEEEEEHHHCCCCC >Mature Secondary Structure MQELTMPKKSDSNSLLLARMTLREDALKNLQIAILQFPFAEIIAEFRNSMEEVLSPNRKK CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCC KVHVPYRQLNNGLVACASTLTHGFEYFDRGDYRALAVGTNENPLRVPTPEQIHELVSIWA EEECCHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH QEWTKQFSGKGKTDQVASVCDRFLEKIDIFPSNWFWQSIPTETLIQNINAEKGLGFQAIP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHH SLLATILHGKACVIRSGQREQEIRWRKAQGDGSGRTGLFLVSQPFVAFYLDENGKERTGY HHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCE FVYRLDFRLQTQAGRFNEISQIKPWIFLHLSCQRYRNPI EEEEEEEEEECCCCCCCCHHHCCCEEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA