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The map label for this gene is 17229446

Identifier: 17229446

GI number: 17229446

Start: 2337577

End: 2337993

Strand: Direct

Name: 17229446

Synonym: alr1954

Alternate gene names: NA

Gene position: 2337577-2337993 (Clockwise)

Preceding gene: 17229445

Following gene: 17229447

Centisome position: 36.45

GC content: 50.36

Gene sequence:

>417_bases
GTGCAAAACCCGCATCATAGTCTTACAGCTAACTCACTAACAGCTAGCCCCAATTACGTCGGGCTAGTCAAGTTCTTGAT
GCAGCCATTTTTAGAAGCTCCAGAGTCTTTAAGCGTCGATTGTGAAATTTCTCCCACCCTGAAACGGGCTTGGGTTCGCA
TCGCCTTTGAAAGTGTAGATAAAGGGAAAGTGTTTGGCCGAGGAGGTCGTAATATTCAGGCGATTCGCACAGTGATTTCT
GCTGCGGCAGAACTTGCTGGACAATCAGTTTACCTGGACATTTACGGCAGCACCACTCCAGGCCGAGAAGGAATGTTTGT
TGAGGAAGACCAACAAGAACGCACGCCTCCGCCAATATCACGAGAAAGAAGCGGAAACGCCCCGCCGCGACCGGTTGTTA
AACCACGCACCCGTTAG

Upstream 100 bases:

>100_bases
TTGGATGTTCCTGGTATTGTCAAGCGACTACAGCAAGGCGCTCAACCTACTGACACGGTACGTCGCATCTTACAAAAACA
AAATGTCTTTGAACAGGTCA

Downstream 100 bases:

>100_bases
CGCCCCTACACGGAATTCAAAATTCAAAAAGCTGATTTCAGCAAGCTTTTCACATATTTTGAATGGTTAATTGATTTAAT
CTGTGCTGTACTAGGTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MQNPHHSLTANSLTASPNYVGLVKFLMQPFLEAPESLSVDCEISPTLKRAWVRIAFESVDKGKVFGRGGRNIQAIRTVIS
AAAELAGQSVYLDIYGSTTPGREGMFVEEDQQERTPPPISRERSGNAPPRPVVKPRTR

Sequences:

>Translated_138_residues
MQNPHHSLTANSLTASPNYVGLVKFLMQPFLEAPESLSVDCEISPTLKRAWVRIAFESVDKGKVFGRGGRNIQAIRTVIS
AAAELAGQSVYLDIYGSTTPGREGMFVEEDQQERTPPPISRERSGNAPPRPVVKPRTR
>Mature_138_residues
MQNPHHSLTANSLTASPNYVGLVKFLMQPFLEAPESLSVDCEISPTLKRAWVRIAFESVDKGKVFGRGGRNIQAIRTVIS
AAAELAGQSVYLDIYGSTTPGREGMFVEEDQQERTPPPISRERSGNAPPRPVVKPRTR

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15176; Mature: 15176

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNPHHSLTANSLTASPNYVGLVKFLMQPFLEAPESLSVDCEISPTLKRAWVRIAFESVD
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCC
KGKVFGRGGRNIQAIRTVISAAAELAGQSVYLDIYGSTTPGREGMFVEEDQQERTPPPIS
CCCEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCHHHCCCCCCC
RERSGNAPPRPVVKPRTR
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQNPHHSLTANSLTASPNYVGLVKFLMQPFLEAPESLSVDCEISPTLKRAWVRIAFESVD
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCC
KGKVFGRGGRNIQAIRTVISAAAELAGQSVYLDIYGSTTPGREGMFVEEDQQERTPPPIS
CCCEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCHHHCCCCCCC
RERSGNAPPRPVVKPRTR
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA