| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229412
Identifier: 17229412
GI number: 17229412
Start: 2302929
End: 2303669
Strand: Direct
Name: 17229412
Synonym: alr1920
Alternate gene names: NA
Gene position: 2302929-2303669 (Clockwise)
Preceding gene: 17229410
Following gene: 17229413
Centisome position: 35.91
GC content: 42.38
Gene sequence:
>741_bases ATGTCTCAAAAGTCGTCTCAAAGCCATCTGTCTACTTCACAAAATCCTTACACAGACAACATCAATCGTTCAGATAAATG GCAACAAAGGGTAGCACAGGTAGCATATCGCTTTAACCAACAGTATCAAAATCAATCCTTAGAACTACCAGCAGAAGTAC AGGAAATGCCGATTTATCGAGAATGGATTTCTGGCATATTGGCAGGAAAGATTGCTTCTCCTTTCTGGGAAATGGCCCAA CCCCAAAAAAATCAGCACTGTTTAGATATTGGTTGTGGAGTTAGTTTTTTGATTTATCCTTGGCGAGATTGGCAAGCATT TTTTTATGGGCAAGATGTAAGCAATGTAGCGCGAGATACCCTCAATTCTCGTGGTTCCCAGTTGAACTCCAAGTTATTCA AAGGCGTGGAATTAGGGGCAGCCCATCAGTTAAAATACACATTGTCTTATTTTGATCTAGCGATCGCTACAGGATTCAGT TGCTATTTTCCCCTGGAATATTGGACATCTGTGTTACAAGCCGTGAAGCGTGTACTCAAACCAGATGGACATTTTGTTTT TGATATCCTCAACGCTGCACACCCTCAAGCTGAAGATTGGGCGGTGTTGGAAACTTACTTGGGCGCGGAAGTGTTTCTAG AACCTGTCACCGAGTGGGAAAAAATAATTAACGCGGCTGGTGCTAAAGTAGTTGGACGACAACCAGGGGAGTTCTTTGAT TTGTACAAGCTACGGTTTTAA
Upstream 100 bases:
>100_bases CTTCACATAAACACTTTCTTTGAGAAAACTCACCTTGATTAAATAGGTTGTCTAATTTTACTTTGTAATCACAATAAATT TCAGGAGTCATGTAGCCCTA
Downstream 100 bases:
>100_bases GATTGGTTGGCGGGAAGAGATGAGGGGATGAGGGAAATGAGAAAGAAACATCTCAAAACTCTTGCTGTCTCCCCCAATCC CCAGTCCCCAGTCCCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSQKSSQSHLSTSQNPYTDNINRSDKWQQRVAQVAYRFNQQYQNQSLELPAEVQEMPIYREWISGILAGKIASPFWEMAQ PQKNQHCLDIGCGVSFLIYPWRDWQAFFYGQDVSNVARDTLNSRGSQLNSKLFKGVELGAAHQLKYTLSYFDLAIATGFS CYFPLEYWTSVLQAVKRVLKPDGHFVFDILNAAHPQAEDWAVLETYLGAEVFLEPVTEWEKIINAAGAKVVGRQPGEFFD LYKLRF
Sequences:
>Translated_246_residues MSQKSSQSHLSTSQNPYTDNINRSDKWQQRVAQVAYRFNQQYQNQSLELPAEVQEMPIYREWISGILAGKIASPFWEMAQ PQKNQHCLDIGCGVSFLIYPWRDWQAFFYGQDVSNVARDTLNSRGSQLNSKLFKGVELGAAHQLKYTLSYFDLAIATGFS CYFPLEYWTSVLQAVKRVLKPDGHFVFDILNAAHPQAEDWAVLETYLGAEVFLEPVTEWEKIINAAGAKVVGRQPGEFFD LYKLRF >Mature_245_residues SQKSSQSHLSTSQNPYTDNINRSDKWQQRVAQVAYRFNQQYQNQSLELPAEVQEMPIYREWISGILAGKIASPFWEMAQP QKNQHCLDIGCGVSFLIYPWRDWQAFFYGQDVSNVARDTLNSRGSQLNSKLFKGVELGAAHQLKYTLSYFDLAIATGFSC YFPLEYWTSVLQAVKRVLKPDGHFVFDILNAAHPQAEDWAVLETYLGAEVFLEPVTEWEKIINAAGAKVVGRQPGEFFDL YKLRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28238; Mature: 28107
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKSSQSHLSTSQNPYTDNINRSDKWQQRVAQVAYRFNQQYQNQSLELPAEVQEMPIYR CCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHH EWISGILAGKIASPFWEMAQPQKNQHCLDIGCGVSFLIYPWRDWQAFFYGQDVSNVARDT HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCEECCCCHHHHHHHH LNSRGSQLNSKLFKGVELGAAHQLKYTLSYFDLAIATGFSCYFPLEYWTSVLQAVKRVLK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHC PDGHFVFDILNAAHPQAEDWAVLETYLGAEVFLEPVTEWEKIINAAGAKVVGRQPGEFFD CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHH LYKLRF HHHHCC >Mature Secondary Structure SQKSSQSHLSTSQNPYTDNINRSDKWQQRVAQVAYRFNQQYQNQSLELPAEVQEMPIYR CCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHH EWISGILAGKIASPFWEMAQPQKNQHCLDIGCGVSFLIYPWRDWQAFFYGQDVSNVARDT HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCCCCCEECCCCHHHHHHHH LNSRGSQLNSKLFKGVELGAAHQLKYTLSYFDLAIATGFSCYFPLEYWTSVLQAVKRVLK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHC PDGHFVFDILNAAHPQAEDWAVLETYLGAEVFLEPVTEWEKIINAAGAKVVGRQPGEFFD CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHH LYKLRF HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA