| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229343
Identifier: 17229343
GI number: 17229343
Start: 2215300
End: 2216013
Strand: Direct
Name: 17229343
Synonym: alr1851
Alternate gene names: NA
Gene position: 2215300-2216013 (Clockwise)
Preceding gene: 17229342
Following gene: 17229344
Centisome position: 34.54
GC content: 38.66
Gene sequence:
>714_bases GTGATGCCTTCCAACTTCGAGCTAAGACTCAAACACTTAGAAGACAACATTAGACAAGACCAAGATTTGCTCAAAAAGTA TCAAGATTCTTTGCGATATGAAGATGATCCACGCCGCCAGGCTAAGTACGAGCGGGAAATTCAGCAATTGCGTGAATCGG CTAATTGTTATCAGAAGGAATACGATGAACTGCAAATGCAAATAACTGGTGAGTCAACTGTACAGATGCAGAACGTAGCT ACCCAGTTGCAGCAGATGAACACCAAAATAGATAGATTGTATGCTGGTCAGAAGGCTATCTATGAAAACATTAATCACTT ACGTCAAGGACTACTAGCTCGTTATGATGCGGGTGAACAGAGGATAATTGCGGCACTTACTGAACAGTTAGATCAATCTC AGATGATTATGATTGCTACGGTTTTAGATGCAATAGAAACTAATCAAGTAACAGATGGAGAAATGCAATTAATCTTACAA GGAATACAGCAAAATATCAATAAATTACAACAAAGTGGTACTGCTTTACCTCCTAGTCAATCAGCATTAGTGGAAGTGAT CAATGCCCCTGAATTAGATTTCAAGCACAGATTGAAAGTTGGTATACCTATTGTCCCTTTTATTTTGGACTATGAAGGTG AATTAGAGCTAGGGACAGGAATAGACTTAGAAGCTGCTTGGAAAACTTTGATTATGCGATTGAAAGGAAAGTAA
Upstream 100 bases:
>100_bases TTTCTTTAATTTGTTCATGATAATTCAATATTTTCCTATTTTTTTATCTAAAGTGCTACAGTAATTTTCATACTTAAGCT AACGTAATAACTCTTAGACC
Downstream 100 bases:
>100_bases ATTGTGGAGATGGAGCAAGAACGTGAACAAGATTTAAAGAAACACATTGAAGAGGATAGAAAATTACAAAAAAAATTAGA AGATCAATATCGATATACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MMPSNFELRLKHLEDNIRQDQDLLKKYQDSLRYEDDPRRQAKYEREIQQLRESANCYQKEYDELQMQITGESTVQMQNVA TQLQQMNTKIDRLYAGQKAIYENINHLRQGLLARYDAGEQRIIAALTEQLDQSQMIMIATVLDAIETNQVTDGEMQLILQ GIQQNINKLQQSGTALPPSQSALVEVINAPELDFKHRLKVGIPIVPFILDYEGELELGTGIDLEAAWKTLIMRLKGK
Sequences:
>Translated_237_residues MMPSNFELRLKHLEDNIRQDQDLLKKYQDSLRYEDDPRRQAKYEREIQQLRESANCYQKEYDELQMQITGESTVQMQNVA TQLQQMNTKIDRLYAGQKAIYENINHLRQGLLARYDAGEQRIIAALTEQLDQSQMIMIATVLDAIETNQVTDGEMQLILQ GIQQNINKLQQSGTALPPSQSALVEVINAPELDFKHRLKVGIPIVPFILDYEGELELGTGIDLEAAWKTLIMRLKGK >Mature_237_residues MMPSNFELRLKHLEDNIRQDQDLLKKYQDSLRYEDDPRRQAKYEREIQQLRESANCYQKEYDELQMQITGESTVQMQNVA TQLQQMNTKIDRLYAGQKAIYENINHLRQGLLARYDAGEQRIIAALTEQLDQSQMIMIATVLDAIETNQVTDGEMQLILQ GIQQNINKLQQSGTALPPSQSALVEVINAPELDFKHRLKVGIPIVPFILDYEGELELGTGIDLEAAWKTLIMRLKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27307; Mature: 27307
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPSNFELRLKHLEDNIRQDQDLLKKYQDSLRYEDDPRRQAKYEREIQQLRESANCYQKE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YDELQMQITGESTVQMQNVATQLQQMNTKIDRLYAGQKAIYENINHLRQGLLARYDAGEQ HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RIIAALTEQLDQSQMIMIATVLDAIETNQVTDGEMQLILQGIQQNINKLQQSGTALPPSQ HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH SALVEVINAPELDFKHRLKVGIPIVPFILDYEGELELGTGIDLEAAWKTLIMRLKGK HHHHHHHCCCCCCHHHHHHCCCCHHHHEECCCCCEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MMPSNFELRLKHLEDNIRQDQDLLKKYQDSLRYEDDPRRQAKYEREIQQLRESANCYQKE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YDELQMQITGESTVQMQNVATQLQQMNTKIDRLYAGQKAIYENINHLRQGLLARYDAGEQ HHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RIIAALTEQLDQSQMIMIATVLDAIETNQVTDGEMQLILQGIQQNINKLQQSGTALPPSQ HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH SALVEVINAPELDFKHRLKVGIPIVPFILDYEGELELGTGIDLEAAWKTLIMRLKGK HHHHHHHCCCCCCHHHHHHCCCCHHHHEECCCCCEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA