| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229330
Identifier: 17229330
GI number: 17229330
Start: 2202678
End: 2203259
Strand: Reverse
Name: 17229330
Synonym: all1838
Alternate gene names: NA
Gene position: 2203259-2202678 (Counterclockwise)
Preceding gene: 17229331
Following gene: 17229329
Centisome position: 34.35
GC content: 45.53
Gene sequence:
>582_bases ATGGGGGTAAAGATGACTAAATACGATCTCTTCATCTACATCATTACCGCTTTACTACCGTTGTCTGCTTGTCTACTAAT AGTACAAGTTAACCCATACCATGCCTTGGTAATTAGGGGCATCCTGGGAGCAGTGGCGGCCTTAGCCTATACGCTTTTGG GTGCGGCAGATGTGGCTTTGACAGAAGCATTAGTGGGTACGATGTTGGCCATAACTTTGTATGCGATCGCTGTTCGTTCA TCCTTAGTTATGCGTCTTGGTATCATCGAAGACCCAGTAAGTGAGGCTGAAAGTAGTTTTGGGCAACTAATGGATGAGTT ACGCAAAATTTTTGGCAAACGCTATATGCGTCTAGAACTAGTTCCCTACCCCAATAACCAAGCTTTGGAACGGGCGCTCA TAGACAAAGAAGTTCATGCAACCTGTAGCAGATTGGAACATGACAACGGGTCTGAAGACCTCTCTTACCAGACTGCCATT AGGGTGAAACGCATCTATGAAATCATGCAAAGCGAACTTGCATCACCAGCAGCAGTCCTCACCTACGTAAATACACCAGA GTTAGGGGAGGAGCATAAATGA
Upstream 100 bases:
>100_bases TTGCAAAGACCCAAAGAATGGCCGTTGCTCATTCTAGGTATCATTTGCTTGGCGATGTGGAACACAATGTTGGGGTATGT ATTAGCATACTGTTCTAGTA
Downstream 100 bases:
>100_bases AATGGATCTACATTGCCGCCGGGATAGCGCTGTATATAAAAATGCTCGTCCTGCCGAATTCCGCACCAAAACTGCTGGAT TTCTCTATCGTGGAATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGVKMTKYDLFIYIITALLPLSACLLIVQVNPYHALVIRGILGAVAALAYTLLGAADVALTEALVGTMLAITLYAIAVRS SLVMRLGIIEDPVSEAESSFGQLMDELRKIFGKRYMRLELVPYPNNQALERALIDKEVHATCSRLEHDNGSEDLSYQTAI RVKRIYEIMQSELASPAAVLTYVNTPELGEEHK
Sequences:
>Translated_193_residues MGVKMTKYDLFIYIITALLPLSACLLIVQVNPYHALVIRGILGAVAALAYTLLGAADVALTEALVGTMLAITLYAIAVRS SLVMRLGIIEDPVSEAESSFGQLMDELRKIFGKRYMRLELVPYPNNQALERALIDKEVHATCSRLEHDNGSEDLSYQTAI RVKRIYEIMQSELASPAAVLTYVNTPELGEEHK >Mature_192_residues GVKMTKYDLFIYIITALLPLSACLLIVQVNPYHALVIRGILGAVAALAYTLLGAADVALTEALVGTMLAITLYAIAVRSS LVMRLGIIEDPVSEAESSFGQLMDELRKIFGKRYMRLELVPYPNNQALERALIDKEVHATCSRLEHDNGSEDLSYQTAIR VKRIYEIMQSELASPAAVLTYVNTPELGEEHK
Specific function: Unknown
COG id: COG1563
COG function: function code P; Predicted subunit of the Multisubunit Na+/H+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21313; Mature: 21182
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVKMTKYDLFIYIITALLPLSACLLIVQVNPYHALVIRGILGAVAALAYTLLGAADVAL CCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEALVGTMLAITLYAIAVRSSLVMRLGIIEDPVSEAESSFGQLMDELRKIFGKRYMRLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE VPYPNNQALERALIDKEVHATCSRLEHDNGSEDLSYQTAIRVKRIYEIMQSELASPAAVL EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEE TYVNTPELGEEHK EECCCCCCCCCCC >Mature Secondary Structure GVKMTKYDLFIYIITALLPLSACLLIVQVNPYHALVIRGILGAVAALAYTLLGAADVAL CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEALVGTMLAITLYAIAVRSSLVMRLGIIEDPVSEAESSFGQLMDELRKIFGKRYMRLEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE VPYPNNQALERALIDKEVHATCSRLEHDNGSEDLSYQTAIRVKRIYEIMQSELASPAAVL EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHEE TYVNTPELGEEHK EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA