Click here to switch to the map view.

The map label for this gene is 17229318

Identifier: 17229318

GI number: 17229318

Start: 2191287

End: 2192003

Strand: Reverse

Name: 17229318

Synonym: all1826

Alternate gene names: NA

Gene position: 2192003-2191287 (Counterclockwise)

Preceding gene: 17229321

Following gene: 17229317

Centisome position: 34.18

GC content: 44.91

Gene sequence:

>717_bases
ATGACAGACCCAATGATTGTATCAGGCACTGCTAATGACATCGACTCCCTCCGGCAACGGCTAATCGCTGGGTCTATCCA
AGTCCAACAACAGATAATCCTACAGTTAGCTGATGTGGGCAATGAAGGATTAGATGTTTTGATGGAATTTTTACTGAAAC
GTCGTGAGAACCCAGCGACTTGGATTGATGGGAAGGCCTACCAAGTCCTTTACGAGTCGGATGCACCTCAAGCCCAGGAA
TTTTTGCAAAATAATTTTCCTGAGGGCATTGTAACTCTAAAATCAAGCTGCGGGATTAATTACAATCCTTTGCAACAATT
ACTAGCTCAACAAGATTTCCAAGCAGCAGACCTCCTGACCATCGAAACCATGTGCGAAATAGCAGGGCCGATGGCTGTCA
AAAGGAAATGGCTGTATTTCACTGACGTGGATAGTTTTCCCACCGATGACCTACAAACCATTAATCAACTGTGGATAGTT
CACTCTGAAGGTAAGTTTGGCTTTTCCGTACAAAGAGACATCTGGTTGAGTTTAGGGAAAAACTGGGATAATTTCTGGCC
GAAAATTGGCTGGAAAAGCGGTAATAATTGGACTCGCTACCCCAACAGCTTTACTTGGGATTTAACTGCGCCCAGAGGTC
ATCTACCCTTGTCTAATCAATTGCGGGGTGTGCGGGTGCTTGCTTCGTTATTTGCTCATCCTGCTTGGTCTAAGTGA

Upstream 100 bases:

>100_bases
GATCAAAAATAGTAAACTACTTTTCGCTATCATTGCTTCGCCATAAAGAAGGCCGATAGCTGACCGCTTTTTCACGCTCC
CGCTAATTACGAGTAATGGC

Downstream 100 bases:

>100_bases
TGGGGATTGGGGACTGGGGATTGGGGATTGGGGGAAGGGAAAGAAAAGAACTAATGACAACTGACCAATGACTTATGAGT
AATGCTACTAAACGAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTDPMIVSGTANDIDSLRQRLIAGSIQVQQQIILQLADVGNEGLDVLMEFLLKRRENPATWIDGKAYQVLYESDAPQAQE
FLQNNFPEGIVTLKSSCGINYNPLQQLLAQQDFQAADLLTIETMCEIAGPMAVKRKWLYFTDVDSFPTDDLQTINQLWIV
HSEGKFGFSVQRDIWLSLGKNWDNFWPKIGWKSGNNWTRYPNSFTWDLTAPRGHLPLSNQLRGVRVLASLFAHPAWSK

Sequences:

>Translated_238_residues
MTDPMIVSGTANDIDSLRQRLIAGSIQVQQQIILQLADVGNEGLDVLMEFLLKRRENPATWIDGKAYQVLYESDAPQAQE
FLQNNFPEGIVTLKSSCGINYNPLQQLLAQQDFQAADLLTIETMCEIAGPMAVKRKWLYFTDVDSFPTDDLQTINQLWIV
HSEGKFGFSVQRDIWLSLGKNWDNFWPKIGWKSGNNWTRYPNSFTWDLTAPRGHLPLSNQLRGVRVLASLFAHPAWSK
>Mature_237_residues
TDPMIVSGTANDIDSLRQRLIAGSIQVQQQIILQLADVGNEGLDVLMEFLLKRRENPATWIDGKAYQVLYESDAPQAQEF
LQNNFPEGIVTLKSSCGINYNPLQQLLAQQDFQAADLLTIETMCEIAGPMAVKRKWLYFTDVDSFPTDDLQTINQLWIVH
SEGKFGFSVQRDIWLSLGKNWDNFWPKIGWKSGNNWTRYPNSFTWDLTAPRGHLPLSNQLRGVRVLASLFAHPAWSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016024
- InterPro:   IPR008629 [H]

Pfam domain/function: PF05419 GUN4 [H]

EC number: NA

Molecular weight: Translated: 27088; Mature: 26957

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPMIVSGTANDIDSLRQRLIAGSIQVQQQIILQLADVGNEGLDVLMEFLLKRRENPAT
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
WIDGKAYQVLYESDAPQAQEFLQNNFPEGIVTLKSSCGINYNPLQQLLAQQDFQAADLLT
EECCCEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
IETMCEIAGPMAVKRKWLYFTDVDSFPTDDLQTINQLWIVHSEGKFGFSVQRDIWLSLGK
HHHHHHHHCCHHHHHEEEEEECCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCC
NWDNFWPKIGWKSGNNWTRYPNSFTWDLTAPRGHLPLSNQLRGVRVLASLFAHPAWSK
CHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDPMIVSGTANDIDSLRQRLIAGSIQVQQQIILQLADVGNEGLDVLMEFLLKRRENPAT
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
WIDGKAYQVLYESDAPQAQEFLQNNFPEGIVTLKSSCGINYNPLQQLLAQQDFQAADLLT
EECCCEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
IETMCEIAGPMAVKRKWLYFTDVDSFPTDDLQTINQLWIVHSEGKFGFSVQRDIWLSLGK
HHHHHHHHCCHHHHHEEEEEECCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCC
NWDNFWPKIGWKSGNNWTRYPNSFTWDLTAPRGHLPLSNQLRGVRVLASLFAHPAWSK
CHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]