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The map label for this gene is crtQ [H]

Identifier: 17229280

GI number: 17229280

Start: 2151563

End: 2153074

Strand: Direct

Name: crtQ [H]

Synonym: alr1788

Alternate gene names: 17229280

Gene position: 2151563-2153074 (Clockwise)

Preceding gene: 17229278

Following gene: 17229282

Centisome position: 33.55

GC content: 42.92

Gene sequence:

>1512_bases
ATGACAGAAGGGTCACAACAAAAACGCGTGATAGTTGTAGGTGCTGGTTGGGCTGGCTTAGGTGCTACCTACCAACTAGC
AAAACAGGGTTATGATGTAACACTTCTGGAAGCAGGCCCCTACCCTGGTGGACTGGTGGCTGGTTGGCAAACCACAGAGG
GTAAATCTGTAGAAGCTGGGATTCATGGCTTCTGGTATCCTTACAGAAATATATTTGCTCTCATTAATGAATTAAACATT
CATCCCTTCACTACCTGGACTCGTTCCGCCCAATATTCCCCTGCGGGTTTGGAGGTAGAATCACCAATTTTTCAAGATTT
GCCCAGACTCCCCACACCTTTAGGTACTTTTGTTTATACTCAATTTCAACGTCTGCCCTTAATTGACCGCCTCAGCGCCT
TACCTTTACTGTATGCAGTGGTTGACTTTGATAATTCTGATGCGGCTTGGCGACGTTATGACAGCGTAACCGCAAGGGAA
TTATTCAAAGATTTTGGGGTTTCGGCAAGACTGTACAAAGAAGCTTTTGAGCCAATGTTATTGGTGGGTTTATTTGCCCC
TGGGGAACAATGTTCAGCCGCCGCTACATTGGGGATGCTTTACTTTTTCATTTTGGCTCACCAAGCTGATTTTGATGTAG
TTTGGTGTCGGGGAACTGTGGGGGAAAAAATATTTCGTCCTTGGGTGGAACGTATAGAAAAAGCTGGGGCAAAGGTGCTA
CCCAAACATCGAGTTACCGATTTAATTATTGATAGTAATAATCAAGCAACAGGCGTAGTTTGTGGAAATGAAGTATTTGA
GGCTGATGCGGTGATTTTTGCCGTTGGTATTACTGGGATGAAAAAAATCGTTTCTAGTAGCCCTAGTTTACAAAGTCGAG
CCGAATTTCGTAATTTAAACAATTTAGGGGCAATCGATGTTTTAGCAACCAGACTTTGGTTTGACCGCAAAATTGATATT
CCCCGCCCCTCTAATGCTTGTTTTGGTTTCGATAATACTACAGGTTGGACATTCTTTGATTTGAATGCCTTACATGATGA
ATATAAAAATGAGGCAGGAACGGTAATTGAAGCTGATTTTTATCATGCTAATCAGTTTCTCAATTGGAGTGATGAGGAAA
TTGTTGCCACAGTTCAAAGTTATTTAACAACCTGTGTCCCAGGATTTGGAGAAGCAAAAGTAATTGATAGCAGTGTAATT
CGCCTACCCCAGGCAGTGACTCACTTTGCCCCTGGTAGCTATCCCTATATGTTACCTGCCAAGACTAGTTTCGATAATGT
CTTTATGAGTGGTGATTGGATTGTCAATCGCCACGGTTCTTGGTCACAAGAAAAAGCTTATGTTACAGGTTTGGAAGCGG
CTAATTTAGTAATGTCACATTTGGGAGAAGGTACACCTGTTGAGATTTTACCAGTAGAAGCAGATGAAGCCCATATTCAA
GTGGCGCGATCGCTCAACCAAACCGTACGTAAAGTAGGTCAATCCATCCTGCCTAACTTTTGGTTGCCCTAG

Upstream 100 bases:

>100_bases
TCAGGGCAAAGTAATCAACAACCTACACTTATCGGTTCCCCACTCCCCACCCTCAGGACTGATAGATTAGTTGAGTGAGG
GAACACAACAGGAGAGCAAA

Downstream 100 bases:

>100_bases
TAGCGCAGCAAGCTTAATTTTTTGTTGAGATATAGCTGTCGCCAGTAGTGTTAGGACATCAATATATGATACGACCTAGC
CACAAAAAGACCTTTCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: Carotene 7,8-desaturase [H]

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MTEGSQQKRVIVVGAGWAGLGATYQLAKQGYDVTLLEAGPYPGGLVAGWQTTEGKSVEAGIHGFWYPYRNIFALINELNI
HPFTTWTRSAQYSPAGLEVESPIFQDLPRLPTPLGTFVYTQFQRLPLIDRLSALPLLYAVVDFDNSDAAWRRYDSVTARE
LFKDFGVSARLYKEAFEPMLLVGLFAPGEQCSAAATLGMLYFFILAHQADFDVVWCRGTVGEKIFRPWVERIEKAGAKVL
PKHRVTDLIIDSNNQATGVVCGNEVFEADAVIFAVGITGMKKIVSSSPSLQSRAEFRNLNNLGAIDVLATRLWFDRKIDI
PRPSNACFGFDNTTGWTFFDLNALHDEYKNEAGTVIEADFYHANQFLNWSDEEIVATVQSYLTTCVPGFGEAKVIDSSVI
RLPQAVTHFAPGSYPYMLPAKTSFDNVFMSGDWIVNRHGSWSQEKAYVTGLEAANLVMSHLGEGTPVEILPVEADEAHIQ
VARSLNQTVRKVGQSILPNFWLP

Sequences:

>Translated_503_residues
MTEGSQQKRVIVVGAGWAGLGATYQLAKQGYDVTLLEAGPYPGGLVAGWQTTEGKSVEAGIHGFWYPYRNIFALINELNI
HPFTTWTRSAQYSPAGLEVESPIFQDLPRLPTPLGTFVYTQFQRLPLIDRLSALPLLYAVVDFDNSDAAWRRYDSVTARE
LFKDFGVSARLYKEAFEPMLLVGLFAPGEQCSAAATLGMLYFFILAHQADFDVVWCRGTVGEKIFRPWVERIEKAGAKVL
PKHRVTDLIIDSNNQATGVVCGNEVFEADAVIFAVGITGMKKIVSSSPSLQSRAEFRNLNNLGAIDVLATRLWFDRKIDI
PRPSNACFGFDNTTGWTFFDLNALHDEYKNEAGTVIEADFYHANQFLNWSDEEIVATVQSYLTTCVPGFGEAKVIDSSVI
RLPQAVTHFAPGSYPYMLPAKTSFDNVFMSGDWIVNRHGSWSQEKAYVTGLEAANLVMSHLGEGTPVEILPVEADEAHIQ
VARSLNQTVRKVGQSILPNFWLP
>Mature_502_residues
TEGSQQKRVIVVGAGWAGLGATYQLAKQGYDVTLLEAGPYPGGLVAGWQTTEGKSVEAGIHGFWYPYRNIFALINELNIH
PFTTWTRSAQYSPAGLEVESPIFQDLPRLPTPLGTFVYTQFQRLPLIDRLSALPLLYAVVDFDNSDAAWRRYDSVTAREL
FKDFGVSARLYKEAFEPMLLVGLFAPGEQCSAAATLGMLYFFILAHQADFDVVWCRGTVGEKIFRPWVERIEKAGAKVLP
KHRVTDLIIDSNNQATGVVCGNEVFEADAVIFAVGITGMKKIVSSSPSLQSRAEFRNLNNLGAIDVLATRLWFDRKIDIP
RPSNACFGFDNTTGWTFFDLNALHDEYKNEAGTVIEADFYHANQFLNWSDEEIVATVQSYLTTCVPGFGEAKVIDSSVIR
LPQAVTHFAPGSYPYMLPAKTSFDNVFMSGDWIVNRHGSWSQEKAYVTGLEAANLVMSHLGEGTPVEILPVEADEAHIQV
ARSLNQTVRKVGQSILPNFWLP

Specific function: Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zeta carotene desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014103
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: =1.14.99.30 [H]

Molecular weight: Translated: 55801; Mature: 55670

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGSQQKRVIVVGAGWAGLGATYQLAKQGYDVTLLEAGPYPGGLVAGWQTTEGKSVEAG
CCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEECEECCCCCCEECC
IHGFWYPYRNIFALINELNIHPFTTWTRSAQYSPAGLEVESPIFQDLPRLPTPLGTFVYT
CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCCCCCCHHHHHHH
QFQRLPLIDRLSALPLLYAVVDFDNSDAAWRRYDSVTARELFKDFGVSARLYKEAFEPML
HHHHCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEE
LVGLFAPGEQCSAAATLGMLYFFILAHQADFDVVWCRGTVGEKIFRPWVERIEKAGAKVL
EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC
PKHRVTDLIIDSNNQATGVVCGNEVFEADAVIFAVGITGMKKIVSSSPSLQSRAEFRNLN
CCCCCEEEEEECCCCEEEEEECCHHHHCCEEEEEECHHHHHHHHCCCCCHHHHHHHHCCC
NLGAIDVLATRLWFDRKIDIPRPSNACFGFDNTTGWTFFDLNALHDEYKNEAGTVIEADF
CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEHHHHHHHHCCCCCCEEEEEE
YHANQFLNWSDEEIVATVQSYLTTCVPGFGEAKVIDSSVIRLPQAVTHFAPGSYPYMLPA
EEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECC
KTSFDNVFMSGDWIVNRHGSWSQEKAYVTGLEAANLVMSHLGEGTPVEILPVEADEAHIQ
CCCCCCEEECCCEEEECCCCCCCCCCEEECHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
VARSLNQTVRKVGQSILPNFWLP
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TEGSQQKRVIVVGAGWAGLGATYQLAKQGYDVTLLEAGPYPGGLVAGWQTTEGKSVEAG
CCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEECEECCCCCCEECC
IHGFWYPYRNIFALINELNIHPFTTWTRSAQYSPAGLEVESPIFQDLPRLPTPLGTFVYT
CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHCCCCCCCHHHHHHH
QFQRLPLIDRLSALPLLYAVVDFDNSDAAWRRYDSVTARELFKDFGVSARLYKEAFEPML
HHHHCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEE
LVGLFAPGEQCSAAATLGMLYFFILAHQADFDVVWCRGTVGEKIFRPWVERIEKAGAKVL
EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCC
PKHRVTDLIIDSNNQATGVVCGNEVFEADAVIFAVGITGMKKIVSSSPSLQSRAEFRNLN
CCCCCEEEEEECCCCEEEEEECCHHHHCCEEEEEECHHHHHHHHCCCCCHHHHHHHHCCC
NLGAIDVLATRLWFDRKIDIPRPSNACFGFDNTTGWTFFDLNALHDEYKNEAGTVIEADF
CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEHHHHHHHHCCCCCCEEEEEE
YHANQFLNWSDEEIVATVQSYLTTCVPGFGEAKVIDSSVIRLPQAVTHFAPGSYPYMLPA
EEHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECC
KTSFDNVFMSGDWIVNRHGSWSQEKAYVTGLEAANLVMSHLGEGTPVEILPVEADEAHIQ
CCCCCCEEECCCEEEECCCCCCCCCCEEECHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
VARSLNQTVRKVGQSILPNFWLP
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]