| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17229273
Identifier: 17229273
GI number: 17229273
Start: 2139599
End: 2139991
Strand: Reverse
Name: 17229273
Synonym: all1781
Alternate gene names: NA
Gene position: 2139991-2139599 (Counterclockwise)
Preceding gene: 17229274
Following gene: 17229272
Centisome position: 33.37
GC content: 41.48
Gene sequence:
>393_bases ATGACTACTGATAATTCTTTGGGTGTGGCAGAACACACACTATTTGTTTGTAAAACCTGCGCTAGTGTTTGGCAAGATGG TAAACGTGTAGGTGAAAGCGGTGGTCAAAAACTTTTAAATCAACTCCAACAGCTAGCACAAGAGTGGGAGTTACGCGATA AATTCCCTATCCAAGAAGTGGAATGTATGAGTGCTTGCAACCGTTCTTGTGTTGTAGCCTTTACAGGGAAAGGTAAATTA ACTTATTTATTTGGGGATTTAGCTGTAGATGATCATGCCTCTGCGGTATTGGAATGTGCTGGTAAATACTACGATAAAGC AGATGGTTTACTACCTTGGTCAGAACGTCCCGAACCTTTGAAAAAAGGCATTCTCGCCAGGATTCCTACCTAA
Upstream 100 bases:
>100_bases CCGGCGCTGTCCCGCAACTGTGAAGGAAAGAAAACTCTTGTAACTTTCCCAGTCAGAACGCCCGCCGAAATTGACGATTC TCAACATCTGCGAGGTACGG
Downstream 100 bases:
>100_bases CTTTTTTGCATTCAAAATGCAAAAGACCTTACATAAAGGTTGCGCCAACAAGCTCCCACTAATTGTCTTTAATTTTGAAT TTTGAATTGGAGCGAAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTTDNSLGVAEHTLFVCKTCASVWQDGKRVGESGGQKLLNQLQQLAQEWELRDKFPIQEVECMSACNRSCVVAFTGKGKL TYLFGDLAVDDHASAVLECAGKYYDKADGLLPWSERPEPLKKGILARIPT
Sequences:
>Translated_130_residues MTTDNSLGVAEHTLFVCKTCASVWQDGKRVGESGGQKLLNQLQQLAQEWELRDKFPIQEVECMSACNRSCVVAFTGKGKL TYLFGDLAVDDHASAVLECAGKYYDKADGLLPWSERPEPLKKGILARIPT >Mature_129_residues TTDNSLGVAEHTLFVCKTCASVWQDGKRVGESGGQKLLNQLQQLAQEWELRDKFPIQEVECMSACNRSCVVAFTGKGKLT YLFGDLAVDDHASAVLECAGKYYDKADGLLPWSERPEPLKKGILARIPT
Specific function: Unknown
COG id: COG5469
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14337; Mature: 14205
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDNSLGVAEHTLFVCKTCASVWQDGKRVGESGGQKLLNQLQQLAQEWELRDKFPIQEV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ECMSACNRSCVVAFTGKGKLTYLFGDLAVDDHASAVLECAGKYYDKADGLLPWSERPEPL HHHHHCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH KKGILARIPT HCCCHHCCCC >Mature Secondary Structure TTDNSLGVAEHTLFVCKTCASVWQDGKRVGESGGQKLLNQLQQLAQEWELRDKFPIQEV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ECMSACNRSCVVAFTGKGKLTYLFGDLAVDDHASAVLECAGKYYDKADGLLPWSERPEPL HHHHHCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH KKGILARIPT HCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA