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The map label for this gene is yibD [C]

Identifier: 17229258

GI number: 17229258

Start: 2121006

End: 2122007

Strand: Reverse

Name: yibD [C]

Synonym: all1766

Alternate gene names: 17229258

Gene position: 2122007-2121006 (Counterclockwise)

Preceding gene: 17229259

Following gene: 17229257

Centisome position: 33.09

GC content: 32.04

Gene sequence:

>1002_bases
ATGACTGAATCCAATTTTGATTTACCAATAATTTCTGTAATTATCCCAGCTTATAATTGTGAAAAAACTATCAAAAAAAC
AATTGATTCGGTTTTAGATCAATCTTTTACTGATTTTGAATTAATTGTCATTAATGATGGTTCACAAGATGCAACATTAG
ACATTGTTTCTCAAATTGAAGATTCGAGGATTAAGATATTTTCCTTTGAAAATGCTGGAGGAAATGTTAGCCGGAATCGG
GGTTTAAATCTTGCAGTGGGAAAATTCATCAGTTTCCTAGATGCAGATGATATTTGGACACCTAATAAACTAGAGTCACA
ATTAGAGGCTTTACATAACAATCCTGGTTTTCATGTTGCATATAGCTGGACTGATTATATTGATGAAGATGGTAATTTTT
TAATTTCTGGTAGACGTGTAACACTTAATGGAGATGTCTATAAAAAGTTGTTTATCAACAATTTTTTAGAAAATGGCTCT
AATCCTTTAATTTGCAAAGAAGCTTTAATTGCATTGGGAGGATTTGATGAATCACTAAAGGCCGCTCAAGATTGGGATAT
GTGGCTAAGATTAGCTAATAAATATTCTTTTGTGGCTGTTCCTTATGTCCAAATATTATATCGGGTTAGTAGTAATTCTC
TATCTTCTAATCTGGTGAGACAGGAAAAAGCTTGTAAGCAAGTACTAGAAAAAGCTTATCAAGCAAGACCTGCGATTGGT
AATCATATTTTGCATTTGAGTATAGCTAATCTTTACAAATATTTAGCTTGTAAAGCCCTGCAAAAGCCTTACAGTCGAAG
TAAAGGTCTAGCTGCTGTTAAATTTATTTGGCAATATTTTCTGTATGATTCTTCTAGAATGAGGCGGATAAATTCTACAT
TAAAACTTTTATTTAAAGCTCTGATAATTATTATATTACCTGCTGGTTTATCTACAGAATTACTAGCAAAAATGAGGACA
AAATCTCTCAATCCACAGTTATCAGCAATTTCTGGCAGTTAA

Upstream 100 bases:

>100_bases
CTTGTAGAGTTCAATTTTTATTTGGGTAGTCTTTTGAGTCCTATATACTCACTCATGTTTTATTTCAATAATTTAACCAA
TGAAGATATAAGTTTAAACA

Downstream 100 bases:

>100_bases
AATATTCACAACATATATCCAGGTGCTTTTACTATCTCTATTTGATAATAAAAATGGCTTAAATTGCCAAAATGAACGGG
GTTTTACACTTCCAGAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTESNFDLPIISVIIPAYNCEKTIKKTIDSVLDQSFTDFELIVINDGSQDATLDIVSQIEDSRIKIFSFENAGGNVSRNR
GLNLAVGKFISFLDADDIWTPNKLESQLEALHNNPGFHVAYSWTDYIDEDGNFLISGRRVTLNGDVYKKLFINNFLENGS
NPLICKEALIALGGFDESLKAAQDWDMWLRLANKYSFVAVPYVQILYRVSSNSLSSNLVRQEKACKQVLEKAYQARPAIG
NHILHLSIANLYKYLACKALQKPYSRSKGLAAVKFIWQYFLYDSSRMRRINSTLKLLFKALIIIILPAGLSTELLAKMRT
KSLNPQLSAISGS

Sequences:

>Translated_333_residues
MTESNFDLPIISVIIPAYNCEKTIKKTIDSVLDQSFTDFELIVINDGSQDATLDIVSQIEDSRIKIFSFENAGGNVSRNR
GLNLAVGKFISFLDADDIWTPNKLESQLEALHNNPGFHVAYSWTDYIDEDGNFLISGRRVTLNGDVYKKLFINNFLENGS
NPLICKEALIALGGFDESLKAAQDWDMWLRLANKYSFVAVPYVQILYRVSSNSLSSNLVRQEKACKQVLEKAYQARPAIG
NHILHLSIANLYKYLACKALQKPYSRSKGLAAVKFIWQYFLYDSSRMRRINSTLKLLFKALIIIILPAGLSTELLAKMRT
KSLNPQLSAISGS
>Mature_332_residues
TESNFDLPIISVIIPAYNCEKTIKKTIDSVLDQSFTDFELIVINDGSQDATLDIVSQIEDSRIKIFSFENAGGNVSRNRG
LNLAVGKFISFLDADDIWTPNKLESQLEALHNNPGFHVAYSWTDYIDEDGNFLISGRRVTLNGDVYKKLFINNFLENGSN
PLICKEALIALGGFDESLKAAQDWDMWLRLANKYSFVAVPYVQILYRVSSNSLSSNLVRQEKACKQVLEKAYQARPAIGN
HILHLSIANLYKYLACKALQKPYSRSKGLAAVKFIWQYFLYDSSRMRRINSTLKLLFKALIIIILPAGLSTELLAKMRTK
SLNPQLSAISGS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=98, Percent_Identity=37.7551020408163, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788372, Length=196, Percent_Identity=30.1020408163265, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37453; Mature: 37322

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESNFDLPIISVIIPAYNCEKTIKKTIDSVLDQSFTDFELIVINDGSQDATLDIVSQIE
CCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCC
DSRIKIFSFENAGGNVSRNRGLNLAVGKFISFLDADDIWTPNKLESQLEALHNNPGFHVA
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEE
YSWTDYIDEDGNFLISGRRVTLNGDVYKKLFINNFLENGSNPLICKEALIALGGFDESLK
EEEHHHCCCCCCEEEECCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHH
AAQDWDMWLRLANKYSFVAVPYVQILYRVSSNSLSSNLVRQEKACKQVLEKAYQARPAIG
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
NHILHLSIANLYKYLACKALQKPYSRSKGLAAVKFIWQYFLYDSSRMRRINSTLKLLFKA
CHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LIIIILPAGLSTELLAKMRTKSLNPQLSAISGS
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TESNFDLPIISVIIPAYNCEKTIKKTIDSVLDQSFTDFELIVINDGSQDATLDIVSQIE
CCCCCCCHHHHHEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCC
DSRIKIFSFENAGGNVSRNRGLNLAVGKFISFLDADDIWTPNKLESQLEALHNNPGFHVA
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEE
YSWTDYIDEDGNFLISGRRVTLNGDVYKKLFINNFLENGSNPLICKEALIALGGFDESLK
EEEHHHCCCCCCEEEECCEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHH
AAQDWDMWLRLANKYSFVAVPYVQILYRVSSNSLSSNLVRQEKACKQVLEKAYQARPAIG
HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
NHILHLSIANLYKYLACKALQKPYSRSKGLAAVKFIWQYFLYDSSRMRRINSTLKLLFKA
CHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LIIIILPAGLSTELLAKMRTKSLNPQLSAISGS
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]