Click here to switch to the map view.

The map label for this gene is 17229220

Identifier: 17229220

GI number: 17229220

Start: 2077564

End: 2078901

Strand: Direct

Name: 17229220

Synonym: alr1728

Alternate gene names: NA

Gene position: 2077564-2078901 (Clockwise)

Preceding gene: 17229219

Following gene: 17229225

Centisome position: 32.39

GC content: 45.96

Gene sequence:

>1338_bases
ATGACAGGCAAAAACGCAAGACATAATGCTTTTCTGCGGCTAGTGTCTGGTAACGGAGCAGCATTTGGGTCAGAATCTCG
CTACTCGCTTACCAGTAAAGAAGTGGTAATTGGACGTGACCCCAGCTGCCAAGTTGTTTTAGATGCCATGATGTATCGGA
TGGTATCCCGTCGTCATGCTGTGGTTCGTCCCGTTGCTTCATCTGTAGATAGCAAATTTAGCTGGGTACTTTGTGATTTG
AATAGTGCCAACGGTACTTATTTAAATGGTCAACGCTTGTACGGATGCCAGGAGTTACACGCAGGCGATCGCATTTCTTT
GGGTGCTGATGGGCCGCAATTCCTGTTTGAGTACGCAGTCGCTCCCCAACCGACAATCATCACTAACCAAGTTGCACCCC
TACCCTCAGCCAAGCACCCCCCTAAACCAGATTCGGTGAGCTTCACCCAGCTGTTTCCGATTATTTCCACTGGTAAGGAT
TTAACACGCAAAGCTTATCTTGTCCCAGGAATACTGACAGTAGTATTTGTGGTGTTAATGTTTGCAACTGTGGGTAGGCC
ACAAGCCAATCAAGTGATTGTCGCAACTTATATAGCTTTGGCTGCTTACTATTTTATTTACCGACTTTGCGGCAAGCCTA
AACCTTGGTGGGTGTTAGTTGGTGCGGCTTTGAGTACAACACTGATTTTACTCAGTCCCTTATTAAATTTATTTATTTTC
ATTTTTCGGGAAGTCCTTCCTGGTAGCGTACCACCCATAGATCAGCCTGTCAGCAGCCTCACAGAATTATTTGTGGGGTA
CTTTTTTGGTGCTGGCTTAATGGAAGAATTACTCAAAGCTTTGCCCATATTGGGAGTATATCTCATTGCTTTGGGACTAC
CACCCGCTTGGCGAGAACGTGTCGGTGTTTGGGAACCTTTGGATGGTATTCTCTTGGGAACGGCTTCGGCTGTAGGCTTT
ACCTTATTGGAAACTCTGGGACAATATGTACCAGCTGCGTCCTTACAAGCAGGTACAGAAGTGGGTTTACAAGTTTTGAT
TGCTCGAATCTTAGGCTTGCCAGCCGGCCACATGGCTTATAGTGGTTATCTGGGATATTTTATCGGGTTAGCTGCTCTTA
AACCCCGTCATGCTAAACAAATTCTCGCCGTTGGCTACCTCAGCGCCGCCGCACTTCACGCTTTATGGAATACAGCCGGA
CACAGTAATAATTTACTCTTAGTTGTTGTTGGGGTCTTGTCTTATGCTTTCTTGATGGCAGCGATTCTTAAAGCTAGAGC
TTTATCGCCAACGCGATCGCAAAATTTTGCCACCCGTTTTCTTGATCCTAAATCCTAA

Upstream 100 bases:

>100_bases
TAGAGCTATAGTGTATTTAGCAATGCTGCTGTTGGTGTGGCTGAGGTTAACGCCGAATGCCCAGGTATTTTTTATGAATT
AGTTTGGAAAGACCTACTCG

Downstream 100 bases:

>100_bases
ATAGATTCCTGAGTAAGGGTCGATGACTCAACTGAGCGTTCTAATGAGCGCTCACACCTAAATCTTTGCCAAACTTTGTT
TCTCTCTCTTAGGGTAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; FHA Domain Protein

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MTGKNARHNAFLRLVSGNGAAFGSESRYSLTSKEVVIGRDPSCQVVLDAMMYRMVSRRHAVVRPVASSVDSKFSWVLCDL
NSANGTYLNGQRLYGCQELHAGDRISLGADGPQFLFEYAVAPQPTIITNQVAPLPSAKHPPKPDSVSFTQLFPIISTGKD
LTRKAYLVPGILTVVFVVLMFATVGRPQANQVIVATYIALAAYYFIYRLCGKPKPWWVLVGAALSTTLILLSPLLNLFIF
IFREVLPGSVPPIDQPVSSLTELFVGYFFGAGLMEELLKALPILGVYLIALGLPPAWRERVGVWEPLDGILLGTASAVGF
TLLETLGQYVPAASLQAGTEVGLQVLIARILGLPAGHMAYSGYLGYFIGLAALKPRHAKQILAVGYLSAAALHALWNTAG
HSNNLLLVVVGVLSYAFLMAAILKARALSPTRSQNFATRFLDPKS

Sequences:

>Translated_445_residues
MTGKNARHNAFLRLVSGNGAAFGSESRYSLTSKEVVIGRDPSCQVVLDAMMYRMVSRRHAVVRPVASSVDSKFSWVLCDL
NSANGTYLNGQRLYGCQELHAGDRISLGADGPQFLFEYAVAPQPTIITNQVAPLPSAKHPPKPDSVSFTQLFPIISTGKD
LTRKAYLVPGILTVVFVVLMFATVGRPQANQVIVATYIALAAYYFIYRLCGKPKPWWVLVGAALSTTLILLSPLLNLFIF
IFREVLPGSVPPIDQPVSSLTELFVGYFFGAGLMEELLKALPILGVYLIALGLPPAWRERVGVWEPLDGILLGTASAVGF
TLLETLGQYVPAASLQAGTEVGLQVLIARILGLPAGHMAYSGYLGYFIGLAALKPRHAKQILAVGYLSAAALHALWNTAG
HSNNLLLVVVGVLSYAFLMAAILKARALSPTRSQNFATRFLDPKS
>Mature_444_residues
TGKNARHNAFLRLVSGNGAAFGSESRYSLTSKEVVIGRDPSCQVVLDAMMYRMVSRRHAVVRPVASSVDSKFSWVLCDLN
SANGTYLNGQRLYGCQELHAGDRISLGADGPQFLFEYAVAPQPTIITNQVAPLPSAKHPPKPDSVSFTQLFPIISTGKDL
TRKAYLVPGILTVVFVVLMFATVGRPQANQVIVATYIALAAYYFIYRLCGKPKPWWVLVGAALSTTLILLSPLLNLFIFI
FREVLPGSVPPIDQPVSSLTELFVGYFFGAGLMEELLKALPILGVYLIALGLPPAWRERVGVWEPLDGILLGTASAVGFT
LLETLGQYVPAASLQAGTEVGLQVLIARILGLPAGHMAYSGYLGYFIGLAALKPRHAKQILAVGYLSAAALHALWNTAGH
SNNLLLVVVGVLSYAFLMAAILKARALSPTRSQNFATRFLDPKS

Specific function: Unknown

COG id: COG2339

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48019; Mature: 47888

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKNARHNAFLRLVSGNGAAFGSESRYSLTSKEVVIGRDPSCQVVLDAMMYRMVSRRHA
CCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEECCCCCHHHHHHHHHHHHHHHHHH
VVRPVASSVDSKFSWVLCDLNSANGTYLNGQRLYGCQELHAGDRISLGADGPQFLFEYAV
HHHHHHHHCCCCCEEEEEEECCCCCCEECCCCCCCHHHHCCCCEEEECCCCHHHHHHHHC
APQPTIITNQVAPLPSAKHPPKPDSVSFTQLFPIISTGKDLTRKAYLVPGILTVVFVVLM
CCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FATVGRPQANQVIVATYIALAAYYFIYRLCGKPKPWWVLVGAALSTTLILLSPLLNLFIF
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
IFREVLPGSVPPIDQPVSSLTELFVGYFFGAGLMEELLKALPILGVYLIALGLPPAWRER
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VGVWEPLDGILLGTASAVGFTLLETLGQYVPAASLQAGTEVGLQVLIARILGLPAGHMAY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHH
SGYLGYFIGLAALKPRHAKQILAVGYLSAAALHALWNTAGHSNNLLLVVVGVLSYAFLMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AILKARALSPTRSQNFATRFLDPKS
HHHHHHCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure 
TGKNARHNAFLRLVSGNGAAFGSESRYSLTSKEVVIGRDPSCQVVLDAMMYRMVSRRHA
CCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCEEECCCCCHHHHHHHHHHHHHHHHHH
VVRPVASSVDSKFSWVLCDLNSANGTYLNGQRLYGCQELHAGDRISLGADGPQFLFEYAV
HHHHHHHHCCCCCEEEEEEECCCCCCEECCCCCCCHHHHCCCCEEEECCCCHHHHHHHHC
APQPTIITNQVAPLPSAKHPPKPDSVSFTQLFPIISTGKDLTRKAYLVPGILTVVFVVLM
CCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
FATVGRPQANQVIVATYIALAAYYFIYRLCGKPKPWWVLVGAALSTTLILLSPLLNLFIF
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
IFREVLPGSVPPIDQPVSSLTELFVGYFFGAGLMEELLKALPILGVYLIALGLPPAWRER
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VGVWEPLDGILLGTASAVGFTLLETLGQYVPAASLQAGTEVGLQVLIARILGLPAGHMAY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCHHHH
SGYLGYFIGLAALKPRHAKQILAVGYLSAAALHALWNTAGHSNNLLLVVVGVLSYAFLMA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AILKARALSPTRSQNFATRFLDPKS
HHHHHHCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA