| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yegM [C]
Identifier: 17229147
GI number: 17229147
Start: 1975441
End: 1976973
Strand: Direct
Name: yegM [C]
Synonym: alr1655
Alternate gene names: 17229147
Gene position: 1975441-1976973 (Clockwise)
Preceding gene: 17229146
Following gene: 17229148
Centisome position: 30.8
GC content: 43.84
Gene sequence:
>1533_bases ATGCAAGATACCAATCCTGCTTCATGTTCATCACCGGAAGAAACTCTAGAGATTGCTGCCTCCTCTGTTGAACAGAATAA AACTCCTAAAAGCTCTTTGAGGTTTTCTTGGGGATTATGCCTAAGTAGCCTACTCTTGTTGGGATTGGGTTTTTGGCTGG GTTCAATTCGTCAAACAGTAGAACCCATTAGTTCCGCAATGGCAGAAAATCAAAATTTCCTGCCCGTTGAAGTGGATAAT CTAGTTGCTGCCAGTTCCTATCAGCAGTCTCGTACCTATACCGGAGAAATTGTTGCCCAAAATACTAGTAATTTAGGATT TGAACGGGCTGGTAAAGTTGTCCAACTTGCGGTAGAAGCAGGACAATGGGTGAGTGCAGGCACTCCCTTAGCCCGTTTAG ATACCAGTCAGTTGATGGCTCAAAAGCAAGAATTATTTGCTCAAAAGCAACAGGCTCTGTTCCAATTGAGAGAGTTGCAA GCTGGGCCGAGGGCAGAAACCATTGATACAGCGAGAGCTAAACTAGCACAAGAACAGGCGCTACTCAAGGAAATGCAATC AGGGCCTCGGATACAAACGATCGCCTCAGCAAGGGCTAATGTCAATAATTTACAGGAACAGTTAGAATTAGCACGCTCTA AAAGTAAGCGGCGAGAAGCCCTTTATAATCAAGGAGCGATCGCTCGTGAACAATTTGACGAAGCGATTACCGATGTTAAT AGTCAACAAGCCAGGGTAAAACAAGCCCAAAGTCAACTGGATGAATTATTAGCCGGAACTCGCTCAGAAGTGATTACTGC TCAACAGGCTAGGGTAAAACAAGCCCAAAGTCAGCTCAATGAATTATTAGCCGGAACTCGTTCAGAAGTGATTGAGGCTC AAAAAGCCGCCCTCAAACAATTACAAAGCCGTCTAGCCAGTTTAGAGCTTGATTTAGAAAAAAGTGTTCTCAAAGCTCCT TTTTCTGGTAAAGTTTCTCAGCGTTATCTTGATCTAGGCACAGCCGTTTCTAGTGGACAAGCGATCGTCCGTCTGGTTCA AGTAGAACAGGTGAAAGCCCATATAGGCATTCCTGCATCCCTCACCTCTCAAATTAAAATCGGGGAAGTTCAATCAATAC AGGTGGGTCAAAAATCCTATCGGGCAAAGGTTGATTCCTTCTTACCAGAACTAGACAAAGCTACTCGTACCATAACCGTA GTTTTAAAATTGGAAGATGCTGCCAGTAAAACTTTAACAGCAGGGCAAATCGTCAATTGGCAACTAAAACAAAAGATATC AACTTCCGGTTATTGGCTGCCAACAACAGCATTAGTACGTGGTATACGGGGGTTGTGGTCTGTCTACATTTTAGGAACAG TTCCCGGAGGCTTTGAAGTAGAACGTCAAGATGTAGAAGTTCTTTATACTGACGGGGAACGGGTTCTGGTACGGGGAACC CTAGAAGGTAATGAACAAATTATTACTAATGGCACAAATCGGCTGGTTCCTGGCCAAAAAGTACGTCCTATCTCATTAGG GAGTTCCAATTAA
Upstream 100 bases:
>100_bases TAAATTCATCCTGGGGCAATATTTCCTGCGTAATTAAGACCTAAGGAGATGATAGTGATAATAACCTTCAAATACTGCTT TAGGAAAGAAAATAGTTAAT
Downstream 100 bases:
>100_bases CAATTCAAAATTCAAAATACCCTACGGGAAGGCTTCGCCAACAAAATTCAAAATTAAAGACAGTTGTGGTCGGTGATTTA AATCCCAATTTGATATTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MQDTNPASCSSPEETLEIAASSVEQNKTPKSSLRFSWGLCLSSLLLLGLGFWLGSIRQTVEPISSAMAENQNFLPVEVDN LVAASSYQQSRTYTGEIVAQNTSNLGFERAGKVVQLAVEAGQWVSAGTPLARLDTSQLMAQKQELFAQKQQALFQLRELQ AGPRAETIDTARAKLAQEQALLKEMQSGPRIQTIASARANVNNLQEQLELARSKSKRREALYNQGAIAREQFDEAITDVN SQQARVKQAQSQLDELLAGTRSEVITAQQARVKQAQSQLNELLAGTRSEVIEAQKAALKQLQSRLASLELDLEKSVLKAP FSGKVSQRYLDLGTAVSSGQAIVRLVQVEQVKAHIGIPASLTSQIKIGEVQSIQVGQKSYRAKVDSFLPELDKATRTITV VLKLEDAASKTLTAGQIVNWQLKQKISTSGYWLPTTALVRGIRGLWSVYILGTVPGGFEVERQDVEVLYTDGERVLVRGT LEGNEQIITNGTNRLVPGQKVRPISLGSSN
Sequences:
>Translated_510_residues MQDTNPASCSSPEETLEIAASSVEQNKTPKSSLRFSWGLCLSSLLLLGLGFWLGSIRQTVEPISSAMAENQNFLPVEVDN LVAASSYQQSRTYTGEIVAQNTSNLGFERAGKVVQLAVEAGQWVSAGTPLARLDTSQLMAQKQELFAQKQQALFQLRELQ AGPRAETIDTARAKLAQEQALLKEMQSGPRIQTIASARANVNNLQEQLELARSKSKRREALYNQGAIAREQFDEAITDVN SQQARVKQAQSQLDELLAGTRSEVITAQQARVKQAQSQLNELLAGTRSEVIEAQKAALKQLQSRLASLELDLEKSVLKAP FSGKVSQRYLDLGTAVSSGQAIVRLVQVEQVKAHIGIPASLTSQIKIGEVQSIQVGQKSYRAKVDSFLPELDKATRTITV VLKLEDAASKTLTAGQIVNWQLKQKISTSGYWLPTTALVRGIRGLWSVYILGTVPGGFEVERQDVEVLYTDGERVLVRGT LEGNEQIITNGTNRLVPGQKVRPISLGSSN >Mature_510_residues MQDTNPASCSSPEETLEIAASSVEQNKTPKSSLRFSWGLCLSSLLLLGLGFWLGSIRQTVEPISSAMAENQNFLPVEVDN LVAASSYQQSRTYTGEIVAQNTSNLGFERAGKVVQLAVEAGQWVSAGTPLARLDTSQLMAQKQELFAQKQQALFQLRELQ AGPRAETIDTARAKLAQEQALLKEMQSGPRIQTIASARANVNNLQEQLELARSKSKRREALYNQGAIAREQFDEAITDVN SQQARVKQAQSQLDELLAGTRSEVITAQQARVKQAQSQLNELLAGTRSEVIEAQKAALKQLQSRLASLELDLEKSVLKAP FSGKVSQRYLDLGTAVSSGQAIVRLVQVEQVKAHIGIPASLTSQIKIGEVQSIQVGQKSYRAKVDSFLPELDKATRTITV VLKLEDAASKTLTAGQIVNWQLKQKISTSGYWLPTTALVRGIRGLWSVYILGTVPGGFEVERQDVEVLYTDGERVLVRGT LEGNEQIITNGTNRLVPGQKVRPISLGSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 55652; Mature: 55652
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDTNPASCSSPEETLEIAASSVEQNKTPKSSLRFSWGLCLSSLLLLGLGFWLGSIRQTV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPISSAMAENQNFLPVEVDNLVAASSYQQSRTYTGEIVAQNTSNLGFERAGKVVQLAVEA HHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCEEEEHHC GQWVSAGTPLARLDTSQLMAQKQELFAQKQQALFQLRELQAGPRAETIDTARAKLAQEQA CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LLKEMQSGPRIQTIASARANVNNLQEQLELARSKSKRREALYNQGAIAREQFDEAITDVN HHHHHHCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC SQQARVKQAQSQLDELLAGTRSEVITAQQARVKQAQSQLNELLAGTRSEVIEAQKAALKQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LQSRLASLELDLEKSVLKAPFSGKVSQRYLDLGTAVSSGQAIVRLVQVEQVKAHIGIPAS HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH LTSQIKIGEVQSIQVGQKSYRAKVDSFLPELDKATRTITVVLKLEDAASKTLTAGQIVNW HHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHCCCCHHCCH QLKQKISTSGYWLPTTALVRGIRGLWSVYILGTVPGGFEVERQDVEVLYTDGERVLVRGT HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCEEEEEECCCEEEEEEE LEGNEQIITNGTNRLVPGQKVRPISLGSSN CCCCCEEEECCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure MQDTNPASCSSPEETLEIAASSVEQNKTPKSSLRFSWGLCLSSLLLLGLGFWLGSIRQTV CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EPISSAMAENQNFLPVEVDNLVAASSYQQSRTYTGEIVAQNTSNLGFERAGKVVQLAVEA HHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCEEEEHHC GQWVSAGTPLARLDTSQLMAQKQELFAQKQQALFQLRELQAGPRAETIDTARAKLAQEQA CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LLKEMQSGPRIQTIASARANVNNLQEQLELARSKSKRREALYNQGAIAREQFDEAITDVN HHHHHHCCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC SQQARVKQAQSQLDELLAGTRSEVITAQQARVKQAQSQLNELLAGTRSEVIEAQKAALKQ HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LQSRLASLELDLEKSVLKAPFSGKVSQRYLDLGTAVSSGQAIVRLVQVEQVKAHIGIPAS HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHH LTSQIKIGEVQSIQVGQKSYRAKVDSFLPELDKATRTITVVLKLEDAASKTLTAGQIVNW HHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHCCCCHHCCH QLKQKISTSGYWLPTTALVRGIRGLWSVYILGTVPGGFEVERQDVEVLYTDGERVLVRGT HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCEEECCCEEEEEECCCEEEEEEE LEGNEQIITNGTNRLVPGQKVRPISLGSSN CCCCCEEEECCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA