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The map label for this gene is fraH

Identifier: 17229095

GI number: 17229095

Start: 1884267

End: 1885136

Strand: Direct

Name: fraH

Synonym: alr1603

Alternate gene names: 17229095

Gene position: 1884267-1885136 (Clockwise)

Preceding gene: 17229094

Following gene: 17229096

Centisome position: 29.38

GC content: 51.03

Gene sequence:

>870_bases
ATGATCGTCTGTCCAAATTGCAACCACCCCAATCCAGACGGCGCTGTCCAATGTGAAGCTTGCTACACGCCGTTACCCGC
CACTAGTAATTGTCCCAACTGTGGCGCAACTGTCCAATCTGATGCTGCTTTCTGTGGTCAGTGTGGCTTTAACCTGCACT
CAGTCGCCGCACCTGCTGCTACTGTCGCTACAATCGCCCCTGATGTTCCAGTAGAAGTACCACCATTAGCTAATCCCGAC
CCGCTTTTAGAATTGTTACAACCCAATGCCTTAGGCCTTGATCCGGTTGCTAACGAGAATCCCCCTGCACCTGCACCCTT
ACCACCAACAGCCGTAGCAGCACCCCCAGATGCAACTCCTGTAGTAGTGGAAGTTACACCTGCCCCACCACCACCCGAAC
CCGTAGTGGTAGAAGCAAGTATTCCTACTCCCCCACCCGAACCCGTAGCGCCCCCAGAACCAGTTCCAGCAGTAGAACCA
GCACCAGCGCCAGAAACTGTTGTAGCCGCACCTCCTTCTCCTGCTAGAACACAATTACAGCAAATTACAGCTCGGTTAGT
TCATGTTCAAAGCGATCAGGAAATAGAACTACCGCCCAGCTTATCTGTGGTTCATATCGGTAAACCTAACGATCGCATTC
CTCCCGATGTTGATGTTTCCGGCTTTGCCAACTCCGAGATTGTCTCAAGGGTACACGCGGATATCCGCTTAGAAGGTGAC
GCGCACTATATAGAAGATGTAGGCAGTTCCAACGGCACTTACATTAACAATTTACCTCTACTACCAGGCAATAGACACCG
CCTCAGACCAGGCGATCGCATCAGTTTAGGTAAAGGCGATTTGGTAACTTTCCTCTTTAAACTCGCTTAA

Upstream 100 bases:

>100_bases
CAAGTCTAACCTTTGGGTGTCTACTGCAAAAGCCGCTCCCAAGGTTAGTTTGCTTGTTAGCAATATATTTTAGGATGCTC
TTGAACAAAGGCTTAAATCA

Downstream 100 bases:

>100_bases
CTAAATTCAGGGTATAGGGGTGTAAGGGTGTAGGGGTATCACTGTTTAAAACCCTACACCCTTATATCTAAAATATGGGT
ACAAAATAGTAATAATTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIVCPNCNHPNPDGAVQCEACYTPLPATSNCPNCGATVQSDAAFCGQCGFNLHSVAAPAATVATIAPDVPVEVPPLANPD
PLLELLQPNALGLDPVANENPPAPAPLPPTAVAAPPDATPVVVEVTPAPPPPEPVVVEASIPTPPPEPVAPPEPVPAVEP
APAPETVVAAPPSPARTQLQQITARLVHVQSDQEIELPPSLSVVHIGKPNDRIPPDVDVSGFANSEIVSRVHADIRLEGD
AHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTFLFKLA

Sequences:

>Translated_289_residues
MIVCPNCNHPNPDGAVQCEACYTPLPATSNCPNCGATVQSDAAFCGQCGFNLHSVAAPAATVATIAPDVPVEVPPLANPD
PLLELLQPNALGLDPVANENPPAPAPLPPTAVAAPPDATPVVVEVTPAPPPPEPVVVEASIPTPPPEPVAPPEPVPAVEP
APAPETVVAAPPSPARTQLQQITARLVHVQSDQEIELPPSLSVVHIGKPNDRIPPDVDVSGFANSEIVSRVHADIRLEGD
AHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTFLFKLA
>Mature_289_residues
MIVCPNCNHPNPDGAVQCEACYTPLPATSNCPNCGATVQSDAAFCGQCGFNLHSVAAPAATVATIAPDVPVEVPPLANPD
PLLELLQPNALGLDPVANENPPAPAPLPPTAVAAPPDATPVVVEVTPAPPPPEPVVVEASIPTPPPEPVAPPEPVPAVEP
APAPETVVAAPPSPARTQLQQITARLVHVQSDQEIELPPSLSVVHIGKPNDRIPPDVDVSGFANSEIVSRVHADIRLEGD
AHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTFLFKLA

Specific function: Putative heterocyst to vegetative cell connection

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FRAH_NOSS1 (P46017)

Other databases:

- EMBL:   U14553
- EMBL:   BA000019
- PIR:   AE2006
- RefSeq:   NP_485643.1
- ProteinModelPortal:   P46017
- SMR:   P46017
- STRING:   P46017
- GeneID:   1105195
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr1603
- NMPDR:   fig|103690.1.peg.1910
- eggNOG:   COG1716
- HOGENOM:   HBG707994
- OMA:   CEACYTP
- ProtClustDB:   CLSK895557
- BioCyc:   NSP103690:ALR1603-MONOMER
- InterPro:   IPR000253
- InterPro:   IPR008984
- Gene3D:   G3DSA:2.60.200.20
- SMART:   SM00240

Pfam domain/function: PF00498 FHA; SSF49879 SMAD_FHA

EC number: NA

Molecular weight: Translated: 29922; Mature: 29922

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVCPNCNHPNPDGAVQCEACYTPLPATSNCPNCGATVQSDAAFCGQCGFNLHSVAAPAA
CEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCHH
TVATIAPDVPVEVPPLANPDPLLELLQPNALGLDPVANENPPAPAPLPPTAVAAPPDATP
EEEEECCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VVVEVTPAPPPPEPVVVEASIPTPPPEPVAPPEPVPAVEPAPAPETVVAAPPSPARTQLQ
EEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHH
QITARLVHVQSDQEIELPPSLSVVHIGKPNDRIPPDVDVSGFANSEIVSRVHADIRLEGD
HHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCC
AHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTFLFKLA
CHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCC
>Mature Secondary Structure
MIVCPNCNHPNPDGAVQCEACYTPLPATSNCPNCGATVQSDAAFCGQCGFNLHSVAAPAA
CEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCHH
TVATIAPDVPVEVPPLANPDPLLELLQPNALGLDPVANENPPAPAPLPPTAVAAPPDATP
EEEEECCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VVVEVTPAPPPPEPVVVEASIPTPPPEPVAPPEPVPAVEPAPAPETVVAAPPSPARTQLQ
EEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHH
QITARLVHVQSDQEIELPPSLSVVHIGKPNDRIPPDVDVSGFANSEIVSRVHADIRLEGD
HHHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCC
AHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTFLFKLA
CHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840