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The map label for this gene is ynbB [H]

Identifier: 17229092

GI number: 17229092

Start: 1880483

End: 1881763

Strand: Direct

Name: ynbB [H]

Synonym: alr1600

Alternate gene names: 17229092

Gene position: 1880483-1881763 (Clockwise)

Preceding gene: 17229088

Following gene: 17229094

Centisome position: 29.32

GC content: 48.32

Gene sequence:

>1281_bases
GTGCGATTCCGCAATTCGCATATTTATAGTTTTTTTGTTAACGAGGAAGTAATGAACAGCTTGGAACAGCTGCGGCAAGC
AGAACAGGCACTGTTAGAGATTTTTTCTGGAATTGACGCTCAGGTCAAGCAAAATCTGAAAAGAGTGCTGGAAGCCTTTC
GTAATCAGCGTGTAGGAGCGCACCACTTTGCTGGTGTAAGTGGTTATGGTCACGATGATTTAGGTCGAGAAACTTTAGAC
AAAGTTTTTGCCGAAGTAATGGGTGCTGAAGCTGCGGCGGTGCGGGTGCAGTTTGTTTCGGGAACTCACGCGATCGCTTG
CGCCCTGTTTGGTGTACTCCGGCCTGGTGATGAAATGTTAGCAGTGGTTGGTTCCCCCTACGATACGCTCGAAGAAGTTA
TTGGTTTACGGGGTCAAGGTCAAGGCTCCCTTATTGAGTTTGGCATAAAATACCGCCAATTGGAGTTAACTTCCCAAGGA
TCTATCGATTGGCAAACTTTAAGTACTAGTATTACTGATCACACTCGCTTAGTTTTAATTCAGCGTTCTTGTGGTTATTC
CTGGCGGCCTAGCTTATCCATTGCCGATATTGAAAAAGTTGTTAATTTAGTCAAACAGCAAAATCCTCACACTGTTTGCT
TTGTGGATAACTGCTACGGTGAATTTATCGAAACCCAGGAACCTACCCATGTTGGTGCTGATTTAATGGCTGGTTCTTTG
ATTAAAAATCCTGGTGGGACGATTGTGACGGCTGGTGGTTATGTAGCTGGACGGGCTGACTTAGTAGAAGCAGCCGCTTG
TCGCCTGACTGCTCCTGGTATTGGTAGTTACGGTGGGGCGACATTTGACCAAAATCGCCTGTTATTCCAAGGGTTGTTTT
TGTCGCCCCAGATGGTGGGTGAGGCGATGAAGGGAACTCACCTGACTGGTTATGTATTTGACAAACTTGGTTATCCAGTC
AATCCTGCACCCCTTGCGCCCCGTGGGGATGTGATTCAGGCGATTAAATTGGGTTCGGCGCAGAAGCTGATTGCCTTCTG
TAAGGCTGTACAACAGAATTCACCTGTGGGTTCTTACCTTGACCCCATTCCCGATGATATGCCGGGGTATGAGAGCCAGG
TGGTGATGGCTGGGGGGACATTTATTGAGGGGAGTACTTTGGAATTTTCGGCGGATGGGCCTTTACGTGAGCCTTATGTG
GTGTATTGCCAGGGGGGGACTCATTGGAGTCATGTGGCGATCGCCCTAGAGGCGGCGATCGACGCTGTGGGAGAGGCTTG
A

Upstream 100 bases:

>100_bases
AGCCCAAGGAAAAATAGGGTATTTACCCAGTTGATTTGAGGTTTAGTTGAAGTAGCAATTGTCATGCAGTAACTCGAATT
AAAATTGTTCAGCCTAGTCT

Downstream 100 bases:

>100_bases
AGGTGGTCACTCCGGTAACTTATACTGCCCCACGATGCGCTTGGCAAACTCCGGCACATGAGCTGCTAACTTCTCAGGAT
GATTCCGCTTTACAAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MRFRNSHIYSFFVNEEVMNSLEQLRQAEQALLEIFSGIDAQVKQNLKRVLEAFRNQRVGAHHFAGVSGYGHDDLGRETLD
KVFAEVMGAEAAAVRVQFVSGTHAIACALFGVLRPGDEMLAVVGSPYDTLEEVIGLRGQGQGSLIEFGIKYRQLELTSQG
SIDWQTLSTSITDHTRLVLIQRSCGYSWRPSLSIADIEKVVNLVKQQNPHTVCFVDNCYGEFIETQEPTHVGADLMAGSL
IKNPGGTIVTAGGYVAGRADLVEAAACRLTAPGIGSYGGATFDQNRLLFQGLFLSPQMVGEAMKGTHLTGYVFDKLGYPV
NPAPLAPRGDVIQAIKLGSAQKLIAFCKAVQQNSPVGSYLDPIPDDMPGYESQVVMAGGTFIEGSTLEFSADGPLREPYV
VYCQGGTHWSHVAIALEAAIDAVGEA

Sequences:

>Translated_426_residues
MRFRNSHIYSFFVNEEVMNSLEQLRQAEQALLEIFSGIDAQVKQNLKRVLEAFRNQRVGAHHFAGVSGYGHDDLGRETLD
KVFAEVMGAEAAAVRVQFVSGTHAIACALFGVLRPGDEMLAVVGSPYDTLEEVIGLRGQGQGSLIEFGIKYRQLELTSQG
SIDWQTLSTSITDHTRLVLIQRSCGYSWRPSLSIADIEKVVNLVKQQNPHTVCFVDNCYGEFIETQEPTHVGADLMAGSL
IKNPGGTIVTAGGYVAGRADLVEAAACRLTAPGIGSYGGATFDQNRLLFQGLFLSPQMVGEAMKGTHLTGYVFDKLGYPV
NPAPLAPRGDVIQAIKLGSAQKLIAFCKAVQQNSPVGSYLDPIPDDMPGYESQVVMAGGTFIEGSTLEFSADGPLREPYV
VYCQGGTHWSHVAIALEAAIDAVGEA
>Mature_426_residues
MRFRNSHIYSFFVNEEVMNSLEQLRQAEQALLEIFSGIDAQVKQNLKRVLEAFRNQRVGAHHFAGVSGYGHDDLGRETLD
KVFAEVMGAEAAAVRVQFVSGTHAIACALFGVLRPGDEMLAVVGSPYDTLEEVIGLRGQGQGSLIEFGIKYRQLELTSQG
SIDWQTLSTSITDHTRLVLIQRSCGYSWRPSLSIADIEKVVNLVKQQNPHTVCFVDNCYGEFIETQEPTHVGADLMAGSL
IKNPGGTIVTAGGYVAGRADLVEAAACRLTAPGIGSYGGATFDQNRLLFQGLFLSPQMVGEAMKGTHLTGYVFDKLGYPV
NPAPLAPRGDVIQAIKLGSAQKLIAFCKAVQQNSPVGSYLDPIPDDMPGYESQVVMAGGTFIEGSTLEFSADGPLREPYV
VYCQGGTHWSHVAIALEAAIDAVGEA

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 45950; Mature: 45950

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRNSHIYSFFVNEEVMNSLEQLRQAEQALLEIFSGIDAQVKQNLKRVLEAFRNQRVGA
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
HHFAGVSGYGHDDLGRETLDKVFAEVMGAEAAAVRVQFVSGTHAIACALFGVLRPGDEML
HHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCEE
AVVGSPYDTLEEVIGLRGQGQGSLIEFGIKYRQLELTSQGSIDWQTLSTSITDHTRLVLI
EEECCCHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCHHHHCCCCCCCEEEEEE
QRSCGYSWRPSLSIADIEKVVNLVKQQNPHTVCFVDNCYGEFIETQEPTHVGADLMAGSL
EECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHH
IKNPGGTIVTAGGYVAGRADLVEAAACRLTAPGIGSYGGATFDQNRLLFQGLFLSPQMVG
HCCCCCCEEECCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEHHHHCCHHHHH
EAMKGTHLTGYVFDKLGYPVNPAPLAPRGDVIQAIKLGSAQKLIAFCKAVQQNSPVGSYL
HHHCCCCEEEEHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
DPIPDDMPGYESQVVMAGGTFIEGSTLEFSADGPLREPYVVYCQGGTHWSHVAIALEAAI
CCCCCCCCCCCCEEEEECCEEECCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
DAVGEA
HHHCCC
>Mature Secondary Structure
MRFRNSHIYSFFVNEEVMNSLEQLRQAEQALLEIFSGIDAQVKQNLKRVLEAFRNQRVGA
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
HHFAGVSGYGHDDLGRETLDKVFAEVMGAEAAAVRVQFVSGTHAIACALFGVLRPGDEML
HHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCEE
AVVGSPYDTLEEVIGLRGQGQGSLIEFGIKYRQLELTSQGSIDWQTLSTSITDHTRLVLI
EEECCCHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCHHHHCCCCCCCEEEEEE
QRSCGYSWRPSLSIADIEKVVNLVKQQNPHTVCFVDNCYGEFIETQEPTHVGADLMAGSL
EECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHH
IKNPGGTIVTAGGYVAGRADLVEAAACRLTAPGIGSYGGATFDQNRLLFQGLFLSPQMVG
HCCCCCCEEECCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEHHHHCCHHHHH
EAMKGTHLTGYVFDKLGYPVNPAPLAPRGDVIQAIKLGSAQKLIAFCKAVQQNSPVGSYL
HHHCCCCEEEEHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
DPIPDDMPGYESQVVMAGGTFIEGSTLEFSADGPLREPYVVYCQGGTHWSHVAIALEAAI
CCCCCCCCCCCCEEEEECCEEECCCEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHH
DAVGEA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]