Click here to switch to the map view.

The map label for this gene is 17229062

Identifier: 17229062

GI number: 17229062

Start: 1836368

End: 1836556

Strand: Direct

Name: 17229062

Synonym: asr1570

Alternate gene names: NA

Gene position: 1836368-1836556 (Clockwise)

Preceding gene: 17229061

Following gene: 17229063

Centisome position: 28.63

GC content: 44.97

Gene sequence:

>189_bases
ATGCAGTATTCCGTTTTTGAATGTGACCTGACACCTACTCAGTATGCTAAACTGCGATCGCGTCTAGCCAAACTCATCAA
ACCAGACCAAGACAGCATCCGTTTTTATCACCTCTGTGCTTGCTGTCAAGGAAAAGTTGAGCGCATTGGCGGCGAAATGC
CAATAGACACCACCGTATTTTTTGCTTAA

Upstream 100 bases:

>100_bases
ATTAAGTCGCACATGGCGTTATTTAGTAATTTCCTACGATGTACCAGAAGATAAACGCCGTACTAAAATTCACAAAGTTC
TCAAATCTTACGGACAGTGG

Downstream 100 bases:

>100_bases
CTTGTGCGTCAACCTATAGGTGTTGGGCAAACACACTGAAATTTATCGTCCCAAACCCTTCCCACTCATGCTTTTGAACC
CTCCAACACCACAATTGAGG

Product: transposase

Products: NA

Alternate protein names: CRISPR-Associated Protein Cas2 Family

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MQYSVFECDLTPTQYAKLRSRLAKLIKPDQDSIRFYHLCACCQGKVERIGGEMPIDTTVFFA

Sequences:

>Translated_62_residues
MQYSVFECDLTPTQYAKLRSRLAKLIKPDQDSIRFYHLCACCQGKVERIGGEMPIDTTVFFA
>Mature_62_residues
MQYSVFECDLTPTQYAKLRSRLAKLIKPDQDSIRFYHLCACCQGKVERIGGEMPIDTTVFFA

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7134; Mature: 7134

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYSVFECDLTPTQYAKLRSRLAKLIKPDQDSIRFYHLCACCQGKVERIGGEMPIDTTVF
CCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FA
EC
>Mature Secondary Structure
MQYSVFECDLTPTQYAKLRSRLAKLIKPDQDSIRFYHLCACCQGKVERIGGEMPIDTTVF
CCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
FA
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA