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The map label for this gene is 17229040

Identifier: 17229040

GI number: 17229040

Start: 1807817

End: 1808755

Strand: Direct

Name: 17229040

Synonym: alr1548

Alternate gene names: NA

Gene position: 1807817-1808755 (Clockwise)

Preceding gene: 17229038

Following gene: 17229042

Centisome position: 28.19

GC content: 44.3

Gene sequence:

>939_bases
ATGATCAAAAATTTTTCCTCTCCTCGCTCAATCATATTTTCTCAAGTAACTAAGCTAGCTCAGGCAAGTTTTGGCGTGGC
GATCGCCCTAACTTTGGCAAGCAATCCATCATGGGCTGACGATCCCTTCCGTGCAGAGAAACCGCGTAACATTGGCGACA
ATACAGAACAAGCTTTTAAAGCAGTCTTTCAACGGGGTGATTATCCCACCGCAGAACGTTATCTCAATCAAGCAATCTCC
AGTGAAGCCAATGAGCCTCTAGCTTACGCCATGAAAGCATCTTTAGCATACATTAACGGAGATTTGACGGGGCTGAGTAA
TTACGGTAAGAAAACCCTGGAAACGGGACAAAAATTAGTTGCAACTGACGAATTACGGGGCAATATTTACACAGCTGTAG
GGCATTTTTTAGAAGGAGGGGCAATTATTAGCCGTGAAGGTACGCTCAGAGGCGCGCCTCAAGCTTTGGGACGGCTCAGA
CAAGTATATGAATATCTGGATAGAGCAGAAGCGATTTCGCCTAGAGATCCAGAATTGAATTTGCTCAAAGGTTATATGGA
CTTGATGTTGTCTGTGAGTCTACCCTTCGCCAACCCAGATGAGGCGATTAACCGCCTACAAACAAACGCTGCGCCTCAGT
ATTTAACTAATCGAGGTATTGCGATCGCCTATCGTGATTTAAAGCAGTACTCTCAAGCTCTAGATTATGCTAACCGCGCC
ATCAAAGAAGCTTCAGATAACCCTGAGTTGTATTATCTCAAAGCGCAAATCCTCAAAGGACAGGGTAGCCAAGAGAAAAG
CCAGCAATTAATTCGAGAAGCGATCGCTAATTTTGACAAAGCCTTAACTAAAAGGTCTCAGCTTCCTAGTCCATTGGTCA
AGCAAATTGAAAGCGAACGCAATAATGCTGTTAATAACCTTAATAGTGCGGGGCGATAA

Upstream 100 bases:

>100_bases
GAGTATTTTATCTGCTATACACGCAAATCATAACTAAATAATTCCGCATTTTAAGTAACATATACAACTTTTTCAACCGC
AATTATTCTGAGGCTGATTC

Downstream 100 bases:

>100_bases
TTGGGGATTGGTGATTGGGTACTGGGGATTGGGTATTGGGGACTGGGGACAAATTAAAGTCTCTTTCATTACCAATTACC
AATTACCCATCATTCATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Domain Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIKNFSSPRSIIFSQVTKLAQASFGVAIALTLASNPSWADDPFRAEKPRNIGDNTEQAFKAVFQRGDYPTAERYLNQAIS
SEANEPLAYAMKASLAYINGDLTGLSNYGKKTLETGQKLVATDELRGNIYTAVGHFLEGGAIISREGTLRGAPQALGRLR
QVYEYLDRAEAISPRDPELNLLKGYMDLMLSVSLPFANPDEAINRLQTNAAPQYLTNRGIAIAYRDLKQYSQALDYANRA
IKEASDNPELYYLKAQILKGQGSQEKSQQLIREAIANFDKALTKRSQLPSPLVKQIESERNNAVNNLNSAGR

Sequences:

>Translated_312_residues
MIKNFSSPRSIIFSQVTKLAQASFGVAIALTLASNPSWADDPFRAEKPRNIGDNTEQAFKAVFQRGDYPTAERYLNQAIS
SEANEPLAYAMKASLAYINGDLTGLSNYGKKTLETGQKLVATDELRGNIYTAVGHFLEGGAIISREGTLRGAPQALGRLR
QVYEYLDRAEAISPRDPELNLLKGYMDLMLSVSLPFANPDEAINRLQTNAAPQYLTNRGIAIAYRDLKQYSQALDYANRA
IKEASDNPELYYLKAQILKGQGSQEKSQQLIREAIANFDKALTKRSQLPSPLVKQIESERNNAVNNLNSAGR
>Mature_312_residues
MIKNFSSPRSIIFSQVTKLAQASFGVAIALTLASNPSWADDPFRAEKPRNIGDNTEQAFKAVFQRGDYPTAERYLNQAIS
SEANEPLAYAMKASLAYINGDLTGLSNYGKKTLETGQKLVATDELRGNIYTAVGHFLEGGAIISREGTLRGAPQALGRLR
QVYEYLDRAEAISPRDPELNLLKGYMDLMLSVSLPFANPDEAINRLQTNAAPQYLTNRGIAIAYRDLKQYSQALDYANRA
IKEASDNPELYYLKAQILKGQGSQEKSQQLIREAIANFDKALTKRSQLPSPLVKQIESERNNAVNNLNSAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34470; Mature: 34470

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNFSSPRSIIFSQVTKLAQASFGVAIALTLASNPSWADDPFRAEKPRNIGDNTEQAFK
CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
AVFQRGDYPTAERYLNQAISSEANEPLAYAMKASLAYINGDLTGLSNYGKKTLETGQKLV
HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHH
ATDELRGNIYTAVGHFLEGGAIISREGTLRGAPQALGRLRQVYEYLDRAEAISPRDPELN
HHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLKGYMDLMLSVSLPFANPDEAINRLQTNAAPQYLTNRGIAIAYRDLKQYSQALDYANRA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IKEASDNPELYYLKAQILKGQGSQEKSQQLIREAIANFDKALTKRSQLPSPLVKQIESER
HHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NNAVNNLNSAGR
HHHHHHHCCCCC
>Mature Secondary Structure
MIKNFSSPRSIIFSQVTKLAQASFGVAIALTLASNPSWADDPFRAEKPRNIGDNTEQAFK
CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
AVFQRGDYPTAERYLNQAISSEANEPLAYAMKASLAYINGDLTGLSNYGKKTLETGQKLV
HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHH
ATDELRGNIYTAVGHFLEGGAIISREGTLRGAPQALGRLRQVYEYLDRAEAISPRDPELN
HHHHHHCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LLKGYMDLMLSVSLPFANPDEAINRLQTNAAPQYLTNRGIAIAYRDLKQYSQALDYANRA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IKEASDNPELYYLKAQILKGQGSQEKSQQLIREAIANFDKALTKRSQLPSPLVKQIESER
HHHCCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NNAVNNLNSAGR
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA