| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229037
Identifier: 17229037
GI number: 17229037
Start: 1805104
End: 1805487
Strand: Direct
Name: 17229037
Synonym: alr1545
Alternate gene names: NA
Gene position: 1805104-1805487 (Clockwise)
Preceding gene: 17229036
Following gene: 17229038
Centisome position: 28.14
GC content: 41.67
Gene sequence:
>384_bases ATGTCACAAGAAGCAATCGAACAAGTTGTTACTGCTTACTTTGCCAATATCACAAGCATGAATCCAGAAGGCTGGATAGA TAATTTTGCCGAAGATGCTATTAGTCATGATCCGGTTGGTGAACCACCATCACAAGTTCATGAGGGATATCGTCAGTTCA TTGGACAGTTACAGGCGGTATTTGAAAAACTAGAAGCAACAATCGAGCATATCTTCATTGCTGCTAATGAAGCAGCTGTT AAATGGACTATGGCTGGAGTCAGCAAAAGTGGTAAGCCGGTGAAGTTTGCAGGAATTACCATCTTTGAGGTTAATGCTGA AGGAAAGATTCAAACAACCCGTGCTTATTGGAATCCTGCACAGATGATTGCACAGTTACGCTAA
Upstream 100 bases:
>100_bases TTTCTGTTGATACCAGGTGTGAGGGTTTCAAACATTTATACCCCTAAACCCCTACACCCCTATTCCCTTCTCCTGTTAAT AGTTAATATTTATTCCTCCC
Downstream 100 bases:
>100_bases AACAACTAATCACGCGCAGGAATTCAATTACTACCAAATGTGAGCAGCATCAGGAAGATAAATAATAATTAATCTTTTCT TTATCTTCACTCCATTCCCC
Product: steroid delta-5-3-ketosteroid isomerase
Products: NA
Alternate protein names: Steroid Delta-Isomerase; Steroid Delta-5-3-Ketosteroid Isomerase
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSQEAIEQVVTAYFANITSMNPEGWIDNFAEDAISHDPVGEPPSQVHEGYRQFIGQLQAVFEKLEATIEHIFIAANEAAV KWTMAGVSKSGKPVKFAGITIFEVNAEGKIQTTRAYWNPAQMIAQLR
Sequences:
>Translated_127_residues MSQEAIEQVVTAYFANITSMNPEGWIDNFAEDAISHDPVGEPPSQVHEGYRQFIGQLQAVFEKLEATIEHIFIAANEAAV KWTMAGVSKSGKPVKFAGITIFEVNAEGKIQTTRAYWNPAQMIAQLR >Mature_126_residues SQEAIEQVVTAYFANITSMNPEGWIDNFAEDAISHDPVGEPPSQVHEGYRQFIGQLQAVFEKLEATIEHIFIAANEAAVK WTMAGVSKSGKPVKFAGITIFEVNAEGKIQTTRAYWNPAQMIAQLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14070; Mature: 13939
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEAIEQVVTAYFANITSMNPEGWIDNFAEDAISHDPVGEPPSQVHEGYRQFIGQLQAV CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FEKLEATIEHIFIAANEAAVKWTMAGVSKSGKPVKFAGITIFEVNAEGKIQTTRAYWNPA HHHHHHHHHHHHEECCCHHEEEEECCCCCCCCCEEEECEEEEEECCCCCEEEHHHHCCHH QMIAQLR HHHHHCC >Mature Secondary Structure SQEAIEQVVTAYFANITSMNPEGWIDNFAEDAISHDPVGEPPSQVHEGYRQFIGQLQAV CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FEKLEATIEHIFIAANEAAVKWTMAGVSKSGKPVKFAGITIFEVNAEGKIQTTRAYWNPA HHHHHHHHHHHHEECCCHHEEEEECCCCCCCCCEEEECEEEEEECCCCCEEEHHHHCCHH QMIAQLR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA