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The map label for this gene is ybhS [H]

Identifier: 17228984

GI number: 17228984

Start: 1755051

End: 1756157

Strand: Direct

Name: ybhS [H]

Synonym: alr1491

Alternate gene names: 17228984

Gene position: 1755051-1756157 (Clockwise)

Preceding gene: 17228983

Following gene: 17228985

Centisome position: 27.36

GC content: 46.61

Gene sequence:

>1107_bases
ATGATGATTCGCCGGATTCGCAATCAATTATTCAAAGAATTAGAGCAGTTTGTGCGCGATCGCTTAGGTGTTGCCCTCGC
TTTTATTTTACCTGTGATTGCCCTGCTAATTATTGGCTATGCAATTCGGCTGGAAACGAAAAATATTGCCCTGGCGGTGC
GGGATCTCGATCAGACAAGCTTCAGCCGGAGTTATATTGAACGACTATACGCCACCAATTTATTTGTACCAGCACAATGG
CAAGGCGAACGCTTTCCCGATGCCATCGACCGGGGAACTGCTCAAGTGCAAGTCACCATTCCACCAGACTTTACTGCTGA
GGTACAAGCAGGCAAAACTGGAAATCTGCAAGTTGTGATTGATGGCAGTGATGTGATCAACGCACGGGTAACAAGATTGG
CGATTCAGGGAACAACTTTGTCAGTTGTACAAGCCCAACTCGGTAAACTTGCTGACTCTGTTGGTGTAATTTCTCAGGTG
CGACTCTGGTTTAATCCGGGACGACAAGAATCATTATTCATTGTACCTGGAAGTTACGGGGTGATTTTAGCCATCTTTCC
GCCGTTGTTGATAGCGATCGCATTAGTGCGAGAAAAAGAACAAGGGACAATTCTACAGCTTTACGCCTCTAGCCTCAGTG
CCTCGGAACTATTGCTAGGTAAGTCCTTGGCATATACCCTCGTGGGATTGGGAGAAGCTTTAATTCTGTTTATTGTCGGT
TTTTTGTTGTTTCAAGTGCGCGTGATTGGCGATCCCACCCCCTTAATTATTGGCACTCCCATATTCATCTGGGTAAGTGT
ACAACTCGGATTAATCATCGGCATTTTTACTACCACCCAAAGCGCGGCTGTACAAGCGATCGGCACAATTAAAGTGCTGA
CTGCCTTTTTGCTGGCAGGATTTTTGTTTCCCCTCAATACAGTGCCGTTTCCATTTTCTATTGCTTCCTACTTAGTTCCC
GTGCGGTATTACATCGAACTGTGTCGGGATGTATTTGTGCGGGGTTCAGGCTGGTTTGGAACTTGGCATCTCATCGGTGC
TTTGCTGCTTTTGGGGATTTTGGAGTTTGCGATCGCTTGGTGGGGAATGCGGCGAATGCAACTATAG

Upstream 100 bases:

>100_bases
TGCAATCGGCAAATCTCTCTCTTACAGATATTCAACCCATGCCATTTTCCTTAGAAGATGCGTTTATTGGGGAAGTGCAA
CGAGCCGGAGGTGCGCCACC

Downstream 100 bases:

>100_bases
AGATATATTCTAATTTATGCCGTTTCAGCGATCGCCCAGATTATCAATAATTGTTAATTATGCTTGACGTAAGGCTTTCA
GAACTATCAAATTTTGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MMIRRIRNQLFKELEQFVRDRLGVALAFILPVIALLIIGYAIRLETKNIALAVRDLDQTSFSRSYIERLYATNLFVPAQW
QGERFPDAIDRGTAQVQVTIPPDFTAEVQAGKTGNLQVVIDGSDVINARVTRLAIQGTTLSVVQAQLGKLADSVGVISQV
RLWFNPGRQESLFIVPGSYGVILAIFPPLLIAIALVREKEQGTILQLYASSLSASELLLGKSLAYTLVGLGEALILFIVG
FLLFQVRVIGDPTPLIIGTPIFIWVSVQLGLIIGIFTTTQSAAVQAIGTIKVLTAFLLAGFLFPLNTVPFPFSIASYLVP
VRYYIELCRDVFVRGSGWFGTWHLIGALLLLGILEFAIAWWGMRRMQL

Sequences:

>Translated_368_residues
MMIRRIRNQLFKELEQFVRDRLGVALAFILPVIALLIIGYAIRLETKNIALAVRDLDQTSFSRSYIERLYATNLFVPAQW
QGERFPDAIDRGTAQVQVTIPPDFTAEVQAGKTGNLQVVIDGSDVINARVTRLAIQGTTLSVVQAQLGKLADSVGVISQV
RLWFNPGRQESLFIVPGSYGVILAIFPPLLIAIALVREKEQGTILQLYASSLSASELLLGKSLAYTLVGLGEALILFIVG
FLLFQVRVIGDPTPLIIGTPIFIWVSVQLGLIIGIFTTTQSAAVQAIGTIKVLTAFLLAGFLFPLNTVPFPFSIASYLVP
VRYYIELCRDVFVRGSGWFGTWHLIGALLLLGILEFAIAWWGMRRMQL
>Mature_368_residues
MMIRRIRNQLFKELEQFVRDRLGVALAFILPVIALLIIGYAIRLETKNIALAVRDLDQTSFSRSYIERLYATNLFVPAQW
QGERFPDAIDRGTAQVQVTIPPDFTAEVQAGKTGNLQVVIDGSDVINARVTRLAIQGTTLSVVQAQLGKLADSVGVISQV
RLWFNPGRQESLFIVPGSYGVILAIFPPLLIAIALVREKEQGTILQLYASSLSASELLLGKSLAYTLVGLGEALILFIVG
FLLFQVRVIGDPTPLIIGTPIFIWVSVQLGLIIGIFTTTQSAAVQAIGTIKVLTAFLLAGFLFPLNTVPFPFSIASYLVP
VRYYIELCRDVFVRGSGWFGTWHLIGALLLLGILEFAIAWWGMRRMQL

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=349, Percent_Identity=26.3610315186246, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI48994943, Length=360, Percent_Identity=27.7777777777778, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=24.4565217391304, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI226510979, Length=378, Percent_Identity=22.4867724867725, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40595; Mature: 40595

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIRRIRNQLFKELEQFVRDRLGVALAFILPVIALLIIGYAIRLETKNIALAVRDLDQTS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCHHH
FSRSYIERLYATNLFVPAQWQGERFPDAIDRGTAQVQVTIPPDFTAEVQAGKTGNLQVVI
HHHHHHHHHHHHCCEEECCCCCCCCCHHHCCCCEEEEEEECCCCCCEECCCCCCCEEEEE
DGSDVINARVTRLAIQGTTLSVVQAQLGKLADSVGVISQVRLWFNPGRQESLFIVPGSYG
CCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
VILAIFPPLLIAIALVREKEQGTILQLYASSLSASELLLGKSLAYTLVGLGEALILFIVG
HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLFQVRVIGDPTPLIIGTPIFIWVSVQLGLIIGIFTTTQSAAVQAIGTIKVLTAFLLAG
HHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHHH
FLFPLNTVPFPFSIASYLVPVRYYIELCRDVFVRGSGWFGTWHLIGALLLLGILEFAIAW
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
WGMRRMQL
HHHHHCCC
>Mature Secondary Structure
MMIRRIRNQLFKELEQFVRDRLGVALAFILPVIALLIIGYAIRLETKNIALAVRDLDQTS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCHHH
FSRSYIERLYATNLFVPAQWQGERFPDAIDRGTAQVQVTIPPDFTAEVQAGKTGNLQVVI
HHHHHHHHHHHHCCEEECCCCCCCCCHHHCCCCEEEEEEECCCCCCEECCCCCCCEEEEE
DGSDVINARVTRLAIQGTTLSVVQAQLGKLADSVGVISQVRLWFNPGRQESLFIVPGSYG
CCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
VILAIFPPLLIAIALVREKEQGTILQLYASSLSASELLLGKSLAYTLVGLGEALILFIVG
HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLFQVRVIGDPTPLIIGTPIFIWVSVQLGLIIGIFTTTQSAAVQAIGTIKVLTAFLLAG
HHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHEEHHHCCHHHHHHHHHHHHHHHHHHHHH
FLFPLNTVPFPFSIASYLVPVRYYIELCRDVFVRGSGWFGTWHLIGALLLLGILEFAIAW
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
WGMRRMQL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]