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The map label for this gene is xisF [C]

Identifier: 17228952

GI number: 17228952

Start: 1716847

End: 1718391

Strand: Direct

Name: xisF [C]

Synonym: alr1459

Alternate gene names: 17228952

Gene position: 1716847-1718391 (Clockwise)

Preceding gene: 17228948

Following gene: 17228953

Centisome position: 26.77

GC content: 41.17

Gene sequence:

>1545_bases
ATGGAAAATTGGGGTTACGCGAGAGTGAGCGGTGAGGAACAGCAAACAGATAAAGGTGCGTTGCGTAAACAAATAGAACG
CTTGCGTAATGCTGGATGTTCAAAAGTGTACTGGGATATTCAATCGCGGACAACTGAAGTCAGAGAAGGGCTACAACAAT
TAATTAATGACTTAAAGACATCTTCAACAGGTAAGGTAAAATCACTGCAATTTACCCGCATTGATCGCATCGGCTCATCA
TCGCGGTTGTTTTATTCATTGTTAGAGGTATTACGTTCCAAGGGAATTAAACTGATAGCCTTAGATCAAGGCGTTGACCC
AGACAGCCTTGGCGGGGAACTAACAATTGATATGTTACTGGCTGCTGCCAAATTTGAGGTAAGAATGGTGACGGAGAGGT
TAAAAAGCGAACGTCGTCATAGGGTGAACCAAGGAAAAAGTCACCGAGTTGCCCCATTAGGATACCGCATAGATAAAGAT
AAATATATACGCGATCGCTCACCATGTGTTTGCTTACTAGAAGGACGCAGAGAATTAACGGTGTCTGACTTAGCCCAGTA
TATTTTTCACACTTTTTTTGAGTGCGGTTCCGTTGCTGCTACTGTGCGTAAGCTGCACTCAGATTTTGGTATAGAAACAA
AAGTTCTGAATTGGAACAAGCTAGAAAAATCTTCCCGGATTGTTGGCGACGACGACTTAGATAAAATTGCATTTACACCA
AATAAAACTAACCACCCCTTGCGTTATCCCTGGTCTGGGCTAAGATGGTCAATCCCTGGTTTAAAAGCGTTATTAGTTAA
CCCTGTTTACGCCGGGGGTTTGCCCTTTGATACTTACGTTAAATCAAAAGGAAAACGCAAGCATTTTGACGAGTGGAAAG
TAAAATGGGGAACCCACGACGATGAGGCAATCATTACCTGTGAGGAACATGAAAGAATAAAACAGATGATTCGAGACAAT
CGCAATAATCGATGGGCTGCAAGAGAAGAAAACGAAGTAAACCCATTTTCTAATTTACTTAAATGTACCCATTGCGGCGG
CTCAATGACACGCCACGCCAAACGTGTAGATAAGAGTGGACAAGCTATCTATTATTATCAGTGCCGATTGTATAAAGCTG
GCAACTGTAGCAATAAAAATATGATTTCATCCAAAATATTAGATATCCAAGTAATGGATTTATTGGCACAAGAAGCCGAA
CGTTTAGCAAATTTGGTGGAAACAGATGAGCCGCTTATTGTAGAAGAACCCCCAGAAGTAAAAACGCTGCGCGCATCCCT
GAATAGTCTGGAAACATTGCCAGCAAGTTCAGCAATTGAACAAATTAAAAATGACCTCAAAGAACAGATTGCGATCGCAC
TAGGAGCAACCAATAATGCTTCTAAACAATCTCTGATTGCCAAGGAAAGAATTATACAAGCTTTTGCTCATAAAAGTTAC
TGGCAAGGACTAAACGCTCAAGATAAACGAGCAATCCTCAATGGTTGCGTAAAAAAAATCTCCGTAGATGGTAACTTTGT
TACAGCTATTGAGTATCGTTACTAG

Upstream 100 bases:

>100_bases
CCTAAGATTTCACCCTGATGCTTTTGTAGCTGTTCGGAAAATTTCTGAGAATAGAAGTATCTGCTATCAAATATAATGAA
AGTCGTGTCTATGGGTTGTT

Downstream 100 bases:

>100_bases
CCAATGTTGCGATCGCGCTGTTACATTGCAACCATGACAAATTTCATCAGGTTTGTAGCTGTAGGGTGCGTCAGTGCGAA
AAAACCTAACCAGACACAAA

Product: fdxN element site-specific recombinase

Products: NA

Alternate protein names: Resolvase; FdxN Element Site-Specific Recombinase; Resolvase-Like Protein; Resolvase Of ISThsp9 Transposon Of The Tn3 Family; Integrase; Site-Specific Recombinase

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MENWGYARVSGEEQQTDKGALRKQIERLRNAGCSKVYWDIQSRTTEVREGLQQLINDLKTSSTGKVKSLQFTRIDRIGSS
SRLFYSLLEVLRSKGIKLIALDQGVDPDSLGGELTIDMLLAAAKFEVRMVTERLKSERRHRVNQGKSHRVAPLGYRIDKD
KYIRDRSPCVCLLEGRRELTVSDLAQYIFHTFFECGSVAATVRKLHSDFGIETKVLNWNKLEKSSRIVGDDDLDKIAFTP
NKTNHPLRYPWSGLRWSIPGLKALLVNPVYAGGLPFDTYVKSKGKRKHFDEWKVKWGTHDDEAIITCEEHERIKQMIRDN
RNNRWAAREENEVNPFSNLLKCTHCGGSMTRHAKRVDKSGQAIYYYQCRLYKAGNCSNKNMISSKILDIQVMDLLAQEAE
RLANLVETDEPLIVEEPPEVKTLRASLNSLETLPASSAIEQIKNDLKEQIAIALGATNNASKQSLIAKERIIQAFAHKSY
WQGLNAQDKRAILNGCVKKISVDGNFVTAIEYRY

Sequences:

>Translated_514_residues
MENWGYARVSGEEQQTDKGALRKQIERLRNAGCSKVYWDIQSRTTEVREGLQQLINDLKTSSTGKVKSLQFTRIDRIGSS
SRLFYSLLEVLRSKGIKLIALDQGVDPDSLGGELTIDMLLAAAKFEVRMVTERLKSERRHRVNQGKSHRVAPLGYRIDKD
KYIRDRSPCVCLLEGRRELTVSDLAQYIFHTFFECGSVAATVRKLHSDFGIETKVLNWNKLEKSSRIVGDDDLDKIAFTP
NKTNHPLRYPWSGLRWSIPGLKALLVNPVYAGGLPFDTYVKSKGKRKHFDEWKVKWGTHDDEAIITCEEHERIKQMIRDN
RNNRWAAREENEVNPFSNLLKCTHCGGSMTRHAKRVDKSGQAIYYYQCRLYKAGNCSNKNMISSKILDIQVMDLLAQEAE
RLANLVETDEPLIVEEPPEVKTLRASLNSLETLPASSAIEQIKNDLKEQIAIALGATNNASKQSLIAKERIIQAFAHKSY
WQGLNAQDKRAILNGCVKKISVDGNFVTAIEYRY
>Mature_514_residues
MENWGYARVSGEEQQTDKGALRKQIERLRNAGCSKVYWDIQSRTTEVREGLQQLINDLKTSSTGKVKSLQFTRIDRIGSS
SRLFYSLLEVLRSKGIKLIALDQGVDPDSLGGELTIDMLLAAAKFEVRMVTERLKSERRHRVNQGKSHRVAPLGYRIDKD
KYIRDRSPCVCLLEGRRELTVSDLAQYIFHTFFECGSVAATVRKLHSDFGIETKVLNWNKLEKSSRIVGDDDLDKIAFTP
NKTNHPLRYPWSGLRWSIPGLKALLVNPVYAGGLPFDTYVKSKGKRKHFDEWKVKWGTHDDEAIITCEEHERIKQMIRDN
RNNRWAAREENEVNPFSNLLKCTHCGGSMTRHAKRVDKSGQAIYYYQCRLYKAGNCSNKNMISSKILDIQVMDLLAQEAE
RLANLVETDEPLIVEEPPEVKTLRASLNSLETLPASSAIEQIKNDLKEQIAIALGATNNASKQSLIAKERIIQAFAHKSY
WQGLNAQDKRAILNGCVKKISVDGNFVTAIEYRY

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58511; Mature: 58511

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENWGYARVSGEEQQTDKGALRKQIERLRNAGCSKVYWDIQSRTTEVREGLQQLINDLKT
CCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC
SSTGKVKSLQFTRIDRIGSSSRLFYSLLEVLRSKGIKLIALDQGVDPDSLGGELTIDMLL
CCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHH
AAAKFEVRMVTERLKSERRHRVNQGKSHRVAPLGYRIDKDKYIRDRSPCVCLLEGRRELT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHCCCCCEEEEECCCCCCC
VSDLAQYIFHTFFECGSVAATVRKLHSDFGIETKVLNWNKLEKSSRIVGDDDLDKIAFTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCCEEECC
NKTNHPLRYPWSGLRWSIPGLKALLVNPVYAGGLPFDTYVKSKGKRKHFDEWKVKWGTHD
CCCCCCCCCCCCCCEECCCCHHHHHHCCHHCCCCCHHHHHHCCCCCCCCHHHEEECCCCC
DEAIITCEEHERIKQMIRDNRNNRWAAREENEVNPFSNLLKCTHCGGSMTRHAKRVDKSG
CCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCC
QAIYYYQCRLYKAGNCSNKNMISSKILDIQVMDLLAQEAERLANLVETDEPLIVEEPPEV
CEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
KTLRASLNSLETLPASSAIEQIKNDLKEQIAIALGATNNASKQSLIAKERIIQAFAHKSY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
WQGLNAQDKRAILNGCVKKISVDGNFVTAIEYRY
HCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECC
>Mature Secondary Structure
MENWGYARVSGEEQQTDKGALRKQIERLRNAGCSKVYWDIQSRTTEVREGLQQLINDLKT
CCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC
SSTGKVKSLQFTRIDRIGSSSRLFYSLLEVLRSKGIKLIALDQGVDPDSLGGELTIDMLL
CCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHH
AAAKFEVRMVTERLKSERRHRVNQGKSHRVAPLGYRIDKDKYIRDRSPCVCLLEGRRELT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHCCCCCEEEEECCCCCCC
VSDLAQYIFHTFFECGSVAATVRKLHSDFGIETKVLNWNKLEKSSRIVGDDDLDKIAFTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCCEEECC
NKTNHPLRYPWSGLRWSIPGLKALLVNPVYAGGLPFDTYVKSKGKRKHFDEWKVKWGTHD
CCCCCCCCCCCCCCEECCCCHHHHHHCCHHCCCCCHHHHHHCCCCCCCCHHHEEECCCCC
DEAIITCEEHERIKQMIRDNRNNRWAAREENEVNPFSNLLKCTHCGGSMTRHAKRVDKSG
CCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCC
QAIYYYQCRLYKAGNCSNKNMISSKILDIQVMDLLAQEAERLANLVETDEPLIVEEPPEV
CEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
KTLRASLNSLETLPASSAIEQIKNDLKEQIAIALGATNNASKQSLIAKERIIQAFAHKSY
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
WQGLNAQDKRAILNGCVKKISVDGNFVTAIEYRY
HCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA