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The map label for this gene is 17228282

Identifier: 17228282

GI number: 17228282

Start: 909647

End: 910228

Strand: Direct

Name: 17228282

Synonym: alr0787

Alternate gene names: NA

Gene position: 909647-910228 (Clockwise)

Preceding gene: 17228281

Following gene: 17228284

Centisome position: 14.18

GC content: 43.64

Gene sequence:

>582_bases
GTGGTTGAACAACAAAAACAAGAACCAGAAATTCCATACTTAACACGTACCCAAGTGCTAGTGGCGATGGGTGTAACTGC
CGTCTTGTTGTGGACAATTGCTAAGTTATGGTTGCGCTTTGGGAACTTTTTGTTATTTGAATGGCATTGGTACCCAAGAG
ATTTTTTGCTGGGGCTTGGTGTAGGGTTAATTATTACTATTTTAAGTGGGCTAGCTTATAGCTTCTGGAAGGCATACCGC
AGAAGCGCCGACTATTACTTAGAATTAGTGCTGAAACCCTTAGCTTGGCCGGACTTAATTTGGTTGGGGTTACTACCAGG
ACTAAGTGAAGAATTGTTATTTCGCGGTGTTATGTTACCCGCTTTAGGCTTAGACCATTTTGCCGTTATTGGTTCTAGTT
TATGCTTTGGTATTCTGCACCTGAGTGGTTCCCAACAATGGCCTTACGTCATTTGGGCAACCATTGTTGGGGTAATACTG
GGGTATAGCGCCTTGTGGACTGGTAACTTGCTAGTGCCAATTGTGGCTCATATCATGACCAATTTGGTTTCTAGTTGTTT
GTGGAAACTGCGCCAGTCGTAG

Upstream 100 bases:

>100_bases
AGTCCATCTTCTTCCCCCAATCCCCATTACCCCTTATCCCCAGAGGGGGCCCCACCTTCCCCAATCCCCAATCTTCAATC
CCTACTCCCCTAAAACTCCC

Downstream 100 bases:

>100_bases
AACACAACACTTCCGTTAAATTAGCTAGGACTTACGCATACAGGTTGTCTGTTGAGACCGGGTGTAAGGATGTAAGGGTG
TAAGGGTTTCAAGCATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; CAAX Amino Protease

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MVEQQKQEPEIPYLTRTQVLVAMGVTAVLLWTIAKLWLRFGNFLLFEWHWYPRDFLLGLGVGLIITILSGLAYSFWKAYR
RSADYYLELVLKPLAWPDLIWLGLLPGLSEELLFRGVMLPALGLDHFAVIGSSLCFGILHLSGSQQWPYVIWATIVGVIL
GYSALWTGNLLVPIVAHIMTNLVSSCLWKLRQS

Sequences:

>Translated_193_residues
MVEQQKQEPEIPYLTRTQVLVAMGVTAVLLWTIAKLWLRFGNFLLFEWHWYPRDFLLGLGVGLIITILSGLAYSFWKAYR
RSADYYLELVLKPLAWPDLIWLGLLPGLSEELLFRGVMLPALGLDHFAVIGSSLCFGILHLSGSQQWPYVIWATIVGVIL
GYSALWTGNLLVPIVAHIMTNLVSSCLWKLRQS
>Mature_193_residues
MVEQQKQEPEIPYLTRTQVLVAMGVTAVLLWTIAKLWLRFGNFLLFEWHWYPRDFLLGLGVGLIITILSGLAYSFWKAYR
RSADYYLELVLKPLAWPDLIWLGLLPGLSEELLFRGVMLPALGLDHFAVIGSSLCFGILHLSGSQQWPYVIWATIVGVIL
GYSALWTGNLLVPIVAHIMTNLVSSCLWKLRQS

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21918; Mature: 21918

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQQKQEPEIPYLTRTQVLVAMGVTAVLLWTIAKLWLRFGNFLLFEWHWYPRDFLLGLG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHH
VGLIITILSGLAYSFWKAYRRSADYYLELVLKPLAWPDLIWLGLLPGLSEELLFRGVMLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
ALGLDHFAVIGSSLCFGILHLSGSQQWPYVIWATIVGVILGYSALWTGNLLVPIVAHIMT
HHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NLVSSCLWKLRQS
HHHHHHHHHHHCC
>Mature Secondary Structure
MVEQQKQEPEIPYLTRTQVLVAMGVTAVLLWTIAKLWLRFGNFLLFEWHWYPRDFLLGLG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHH
VGLIITILSGLAYSFWKAYRRSADYYLELVLKPLAWPDLIWLGLLPGLSEELLFRGVMLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
ALGLDHFAVIGSSLCFGILHLSGSQQWPYVIWATIVGVILGYSALWTGNLLVPIVAHIMT
HHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
NLVSSCLWKLRQS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA