| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228186
Identifier: 17228186
GI number: 17228186
Start: 797712
End: 798701
Strand: Direct
Name: 17228186
Synonym: alr0691
Alternate gene names: NA
Gene position: 797712-798701 (Clockwise)
Preceding gene: 17228185
Following gene: 17228187
Centisome position: 12.44
GC content: 44.75
Gene sequence:
>990_bases ATGACACCCAGCATTACAGATTCAACAGTAAAAGCTGCATTGGCCGCCATTGCATCGGAGTCAGCGACAACTGAAGAGAA AATTCAGATGTTGATTGAATTGGCACAAGGTTTGCAGAAAAAACCTAAAACGCCTGGGGATTTATGGAATGCTGTTGAGT TATATCAGCAAGCAATTAAAATGTGCGGTGGGGATTATTCTTTATGGAAAGCCCGTTCTCAGGCGGGAATGGCTGGGGCG TTGAAGTCAATTCCTGATGTGGGGGCGGAATTGCTGCTACAAGCTAAAGCTGGTTATGAGGAAGCGTTACCAGTTCTGCG ACAGTTGGCTGCGGCGGTGGAAGTTGCAGAAGCCCAGATGAATTTCGGGTTGGTGTTGCAGTCTTTAGTGCCTTTTAATT TGGCGAGGATAACCGATAGTATTGCTGCTTATCAGGAGGCGATGGGGGTATTTACAAGTCAGGATTATCCTCAAGAATAC GCGATTTTGGCGAATAATGTTGCGATCGCCTACCTTTCTATGTCGGGGGGTGGAGAACAGCAAAATCTCTATGCAGGTTT GGCTGTACAGACCTTTGAGTCAGCACTCAAGCAAATTAACTTGATTGACCACCCCAGGGAATATGCCATGTTGCAAAATA ACTTGGGTAATGCTTTGCAATATTTACCCAGTTCTCATCCTGTGGAAAATAATTTACGGGCGATCGCAGCCTATAATGAA GCATTAAAGGTACGTACTTGTCAAGGTACGCCTGTGGAGTATGCAAACACGATTGCCAACAAGGCTAATGCTTTATTTAA TTTACCTGATGACCCGGAAAAGCCAGAGTTAGGTAATTCCCAAAATCTTTTACAAGCCCGTGCTTATTATCAAGAGGCTT GGGAAATATTTAGTCAATGTCAGCAAATGGAACAGGCGGAGGCGGTAGCCCAGGCGTTGCATGAAGTAGCAGCAGAAATT AGGATAAGCATGAGTAATGGCGACAAATAA
Upstream 100 bases:
>100_bases TCATCCCTTTTTGTCTGCAAACAAGCTGTATATTTACCTGAAAAATGGTGATATTTCCTGAAAGAAAATCCTAGTTTTAC TACCTCACAATTGACTTTAA
Downstream 100 bases:
>100_bases ACCATTTGTAGAGACGCGATTCATCGCGTCTTCTTCACCCAAAGATATGTTGCTAACAAATGACAAATTTAGAAGATTTG GTGACGGAAATTAGCCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide-Repeat Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTPSITDSTVKAALAAIASESATTEEKIQMLIELAQGLQKKPKTPGDLWNAVELYQQAIKMCGGDYSLWKARSQAGMAGA LKSIPDVGAELLLQAKAGYEEALPVLRQLAAAVEVAEAQMNFGLVLQSLVPFNLARITDSIAAYQEAMGVFTSQDYPQEY AILANNVAIAYLSMSGGGEQQNLYAGLAVQTFESALKQINLIDHPREYAMLQNNLGNALQYLPSSHPVENNLRAIAAYNE ALKVRTCQGTPVEYANTIANKANALFNLPDDPEKPELGNSQNLLQARAYYQEAWEIFSQCQQMEQAEAVAQALHEVAAEI RISMSNGDK
Sequences:
>Translated_329_residues MTPSITDSTVKAALAAIASESATTEEKIQMLIELAQGLQKKPKTPGDLWNAVELYQQAIKMCGGDYSLWKARSQAGMAGA LKSIPDVGAELLLQAKAGYEEALPVLRQLAAAVEVAEAQMNFGLVLQSLVPFNLARITDSIAAYQEAMGVFTSQDYPQEY AILANNVAIAYLSMSGGGEQQNLYAGLAVQTFESALKQINLIDHPREYAMLQNNLGNALQYLPSSHPVENNLRAIAAYNE ALKVRTCQGTPVEYANTIANKANALFNLPDDPEKPELGNSQNLLQARAYYQEAWEIFSQCQQMEQAEAVAQALHEVAAEI RISMSNGDK >Mature_328_residues TPSITDSTVKAALAAIASESATTEEKIQMLIELAQGLQKKPKTPGDLWNAVELYQQAIKMCGGDYSLWKARSQAGMAGAL KSIPDVGAELLLQAKAGYEEALPVLRQLAAAVEVAEAQMNFGLVLQSLVPFNLARITDSIAAYQEAMGVFTSQDYPQEYA ILANNVAIAYLSMSGGGEQQNLYAGLAVQTFESALKQINLIDHPREYAMLQNNLGNALQYLPSSHPVENNLRAIAAYNEA LKVRTCQGTPVEYANTIANKANALFNLPDDPEKPELGNSQNLLQARAYYQEAWEIFSQCQQMEQAEAVAQALHEVAAEIR ISMSNGDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35733; Mature: 35602
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSITDSTVKAALAAIASESATTEEKIQMLIELAQGLQKKPKTPGDLWNAVELYQQAIK CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MCGGDYSLWKARSQAGMAGALKSIPDVGAELLLQAKAGYEEALPVLRQLAAAVEVAEAQM HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NFGLVLQSLVPFNLARITDSIAAYQEAMGVFTSQDYPQEYAILANNVAIAYLSMSGGGEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEECCCCCC QNLYAGLAVQTFESALKQINLIDHPREYAMLQNNLGNALQYLPSSHPVENNLRAIAAYNE CHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALKVRTCQGTPVEYANTIANKANALFNLPDDPEKPELGNSQNLLQARAYYQEAWEIFSQC HHEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QQMEQAEAVAQALHEVAAEIRISMSNGDK HHHHHHHHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure TPSITDSTVKAALAAIASESATTEEKIQMLIELAQGLQKKPKTPGDLWNAVELYQQAIK CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MCGGDYSLWKARSQAGMAGALKSIPDVGAELLLQAKAGYEEALPVLRQLAAAVEVAEAQM HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH NFGLVLQSLVPFNLARITDSIAAYQEAMGVFTSQDYPQEYAILANNVAIAYLSMSGGGEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEEECCCCCC QNLYAGLAVQTFESALKQINLIDHPREYAMLQNNLGNALQYLPSSHPVENNLRAIAAYNE CHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH ALKVRTCQGTPVEYANTIANKANALFNLPDDPEKPELGNSQNLLQARAYYQEAWEIFSQC HHEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH QQMEQAEAVAQALHEVAAEIRISMSNGDK HHHHHHHHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA