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The map label for this gene is 17228179

Identifier: 17228179

GI number: 17228179

Start: 789914

End: 790339

Strand: Direct

Name: 17228179

Synonym: alr0683

Alternate gene names: NA

Gene position: 789914-790339 (Clockwise)

Preceding gene: 17228178

Following gene: 17228181

Centisome position: 12.32

GC content: 34.98

Gene sequence:

>426_bases
ATGATCATAGTTGATACAGGCTTTTGGTTAGCTCTTGCCAATAAAAAAGATACAGTTCATATATCCGCCAAAAAACGATT
TCAAGATTTAGCTAATCAGCAATTTATTACGACTTGGTGTGTCGTCACGGAAACGTGCTATCTATTACAAAAAAGAGTAG
GAGTAGATGCTCCAAAAATCTTTATTCATAAAATTTCTACAGGAAAGCTACAAATCTTTGATCTGAAACAACATCATTGC
CAGCGTATTGAAGAACTGATGGAAAAATATAAAGACTTACCGATGGATTTAGCCGATGCCTCTCTCGTTATTTTGGCAGA
AGAATTAGGTCATGGTCAAATTTTATCGGTTGATTATCGAGACTTCAACACCTATCGCTGGAAAAATACAGAACCTTTTG
ATAACCTCTTTCAGGAATTTTTATGA

Upstream 100 bases:

>100_bases
TCCTTACAAGACTGGTCAGACTTTATCGGTTGCATAGAAGCTGAAACAGACCTCTCAAAAAACTATAAAAACTACTTAGA
CCATGAACTTAACCAAAAAT

Downstream 100 bases:

>100_bases
CGTAGTGCGACTATAAATTCCTGGGAATGTAGCAGGATTATAGAATTTAATCAAGCGATCGCAGTCTAGAAGTGTTAGAT
TTACTGTTAAACATATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIIVDTGFWLALANKKDTVHISAKKRFQDLANQQFITTWCVVTETCYLLQKRVGVDAPKIFIHKISTGKLQIFDLKQHHC
QRIEELMEKYKDLPMDLADASLVILAEELGHGQILSVDYRDFNTYRWKNTEPFDNLFQEFL

Sequences:

>Translated_141_residues
MIIVDTGFWLALANKKDTVHISAKKRFQDLANQQFITTWCVVTETCYLLQKRVGVDAPKIFIHKISTGKLQIFDLKQHHC
QRIEELMEKYKDLPMDLADASLVILAEELGHGQILSVDYRDFNTYRWKNTEPFDNLFQEFL
>Mature_141_residues
MIIVDTGFWLALANKKDTVHISAKKRFQDLANQQFITTWCVVTETCYLLQKRVGVDAPKIFIHKISTGKLQIFDLKQHHC
QRIEELMEKYKDLPMDLADASLVILAEELGHGQILSVDYRDFNTYRWKNTEPFDNLFQEFL

Specific function: Unknown

COG id: COG2402

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16536; Mature: 16536

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVDTGFWLALANKKDTVHISAKKRFQDLANQQFITTWCVVTETCYLLQKRVGVDAPKI
CEEECCCEEEEECCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
FIHKISTGKLQIFDLKQHHCQRIEELMEKYKDLPMDLADASLVILAEELGHGQILSVDYR
EEEEECCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEECC
DFNTYRWKNTEPFDNLFQEFL
CCCEEECCCCCCHHHHHHHHC
>Mature Secondary Structure
MIIVDTGFWLALANKKDTVHISAKKRFQDLANQQFITTWCVVTETCYLLQKRVGVDAPKI
CEEECCCEEEEECCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
FIHKISTGKLQIFDLKQHHCQRIEELMEKYKDLPMDLADASLVILAEELGHGQILSVDYR
EEEEECCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEECC
DFNTYRWKNTEPFDNLFQEFL
CCCEEECCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA