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The map label for this gene is cpcT2

Identifier: 17228143

GI number: 17228143

Start: 750755

End: 751351

Strand: Direct

Name: cpcT2

Synonym: alr0647

Alternate gene names: 17228143

Gene position: 750755-751351 (Clockwise)

Preceding gene: 17228141

Following gene: 17228145

Centisome position: 11.71

GC content: 44.72

Gene sequence:

>597_bases
ATGAGCTTTTCGCCCCAATTAGTTAACTTAGGTAATTACCTAGCTGGAGAATTTGACAACAGAGAACAAGCCTTAGGCGA
GCCGATTTGGTTTGTTCACTTACGTCTATGGCAAAGACCTGTTGATTTGTTTTCCGACGATAGCATTACTCTGTTTGCCG
AACAAGCCAACATTGTCAATCTAGACCGTCCTTATCGTCAACGTATTCTGCGGTTGATGCCTGCTCCTGACTCGGAAACT
GGGCTATATGTACAGTACTATATGCCTAAAAATCCCAGTGCTTTAATTGGTGCAGGTCGTCACCCAGACTTACTCAAGAC
TTTAACCCCCCAGCAACTAGAACTACTTCCTGGCTGTGTTCTCTCAGTTAGCCAGCAAACAGTTGCACCTAACAGCTATC
AGTTTACTGCGTCCCCACTGCCAAATACTTGCTGTACTTTCAGTTATTTGGAGAACACTGTACAAGTTTCTTTAGGTTTT
GCAGTCACAGAGACAGAACTGCACACCTATGATAAAGGAATTGACCAAGAGACAGGCAAGGCAACTTGGGGAGCAATTGT
CGGCCCCTATCGCTACACTAAGCGAGAACAGTATTGA

Upstream 100 bases:

>100_bases
ATTATTTTCTACCCCTAAAGACTACTTTGCTAAGTTGGGGTTTCGGCCTAGTAATCTTTATTATATTCTGTGAGCATATT
TGCTATTGTGCCTCACACTT

Downstream 100 bases:

>100_bases
GTACAGAGTGCTGAGTTAAGAGAAATGACTTGTGTTAAATAGTTTTCAGCTTGAACAGTGGCCTCAATTGTTTCTATACC
AATTGATAAAAAGAACGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSFSPQLVNLGNYLAGEFDNREQALGEPIWFVHLRLWQRPVDLFSDDSITLFAEQANIVNLDRPYRQRILRLMPAPDSET
GLYVQYYMPKNPSALIGAGRHPDLLKTLTPQQLELLPGCVLSVSQQTVAPNSYQFTASPLPNTCCTFSYLENTVQVSLGF
AVTETELHTYDKGIDQETGKATWGAIVGPYRYTKREQY

Sequences:

>Translated_198_residues
MSFSPQLVNLGNYLAGEFDNREQALGEPIWFVHLRLWQRPVDLFSDDSITLFAEQANIVNLDRPYRQRILRLMPAPDSET
GLYVQYYMPKNPSALIGAGRHPDLLKTLTPQQLELLPGCVLSVSQQTVAPNSYQFTASPLPNTCCTFSYLENTVQVSLGF
AVTETELHTYDKGIDQETGKATWGAIVGPYRYTKREQY
>Mature_197_residues
SFSPQLVNLGNYLAGEFDNREQALGEPIWFVHLRLWQRPVDLFSDDSITLFAEQANIVNLDRPYRQRILRLMPAPDSETG
LYVQYYMPKNPSALIGAGRHPDLLKTLTPQQLELLPGCVLSVSQQTVAPNSYQFTASPLPNTCCTFSYLENTVQVSLGFA
VTETELHTYDKGIDQETGKATWGAIVGPYRYTKREQY

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. In vitro is not seen to act as a chromophore lyase for ApcA1, ApcA2, ApcB, ApcD, ApcF, CpcB or PecB, the lyase activity is therefore unsure

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcT/CpeT biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPCTL_NOSS1 (Q8YZ40)

Other databases:

- EMBL:   BA000019
- PIR:   AF1887
- RefSeq:   NP_484691.1
- STRING:   Q8YZ40
- GeneID:   1104243
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr0647
- NMPDR:   fig|103690.1.peg.958
- eggNOG:   NOG80145
- HOGENOM:   HBG442026
- OMA:   KATWGAI
- ProtClustDB:   CLSK895338
- BioCyc:   NSP103690:ALR0647-MONOMER
- HAMAP:   MF_01460
- InterPro:   IPR010404

Pfam domain/function: PF06206 DUF1001

EC number: NA

Molecular weight: Translated: 22397; Mature: 22265

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSPQLVNLGNYLAGEFDNREQALGEPIWFVHLRLWQRPVDLFSDDSITLFAEQANIVN
CCCCCCCCCCCHHHCCCCCCHHHHHCCCEEEEHHHHHHCCHHHCCCCCEEEEEECCCEEE
LDRPYRQRILRLMPAPDSETGLYVQYYMPKNPSALIGAGRHPDLLKTLTPQQLELLPGCV
CCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHCCHHHHHHCCHHH
LSVSQQTVAPNSYQFTASPLPNTCCTFSYLENTVQVSLGFAVTETELHTYDKGIDQETGK
EECCHHHCCCCCEEEECCCCCCHHEEHHHHCCEEEEEEEEEEEECHHHHHHCCCCCCCCC
ATWGAIVGPYRYTKREQY
CCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
SFSPQLVNLGNYLAGEFDNREQALGEPIWFVHLRLWQRPVDLFSDDSITLFAEQANIVN
CCCCCCCCCCHHHCCCCCCHHHHHCCCEEEEHHHHHHCCHHHCCCCCEEEEEECCCEEE
LDRPYRQRILRLMPAPDSETGLYVQYYMPKNPSALIGAGRHPDLLKTLTPQQLELLPGCV
CCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCCHHHHHCCHHHHHHCCHHH
LSVSQQTVAPNSYQFTASPLPNTCCTFSYLENTVQVSLGFAVTETELHTYDKGIDQETGK
EECCHHHCCCCCEEEECCCCCCHHEEHHHHCCEEEEEEEEEEEECHHHHHHCCCCCCCCC
ATWGAIVGPYRYTKREQY
CCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840